FFCP PHASE1:Hg19::chr11:66495591..66495624,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:66495591..66495624,- | |||
|id=chr11:66495591..66495624,- | |||
|ontology_enrichment_celltype=CL:0000066!1.60e-39!254;CL:0002076!5.91e-14!43;CL:0000223!1.69e-11!59;CL:0002251!5.93e-09!21;CL:0000076!9.23e-08!62;CL:0002368!9.68e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.36e-13;42!CL:0002368;4.09e-12;13!CL:1000507;7.33e-11;10!CL:1000494;7.33e-11;10!CL:0002251;2.03e-10;20!CL:1000449;2.93e-08;15!CL:0002202;1.42e-07;9!CL:0002632;1.42e-07;9!CL:1000497;5.13e-07;17!CL:0002518;5.13e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.01e-34,253;CL:0002076,1.54e-17,42;CL:0000223,2.24e-15,58;CL:0002368,3.83e-12,13;CL:1000507,1.59e-10,10;CL:1000494,1.59e-10,10;CL:0002251,2.64e-10,20;CL:1000449,4.60e-08,15;CL:0002202,8.79e-08,9;CL:0002632,8.79e-08,9;CL:0000076,1.09e-07,63;CL:1000497,7.54e-07,17;CL:0002518,7.54e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000223;2.93e-09;58 | |||
|ontology_enrichment_disease=DOID:305!2.24e-19!106;DOID:0050687!1.51e-18!143;DOID:14566!1.66e-13!239;DOID:162!3.03e-13!235;DOID:1749!7.91e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.41e-18;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.60e-18,14;DOID:305,1.12e-16,106;DOID:0050687,4.55e-16,143;DOID:162,3.53e-12,235;DOID:14566,4.48e-12,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.26e-14!169;UBERON:0000925!4.26e-14!169;UBERON:0006595!4.26e-14!169;UBERON:0001004!3.66e-12!72;UBERON:0001007!7.01e-12!155;UBERON:0001555!7.01e-12!155;UBERON:0007026!7.01e-12!155;UBERON:0004921!9.26e-12!129;UBERON:0004185!9.26e-12!129;UBERON:0001041!1.25e-11!98;UBERON:0000077!2.15e-11!130;UBERON:0000063!2.46e-10!97;UBERON:0000464!4.77e-10!104;UBERON:0000065!4.17e-09!53;UBERON:0008947!8.39e-09!38;UBERON:0003258!8.39e-09!38;UBERON:0000466!8.85e-09!126;UBERON:0000033!1.34e-08!123;UBERON:0000481!2.17e-08!347;UBERON:0000064!3.12e-08!219;UBERON:0000072!3.77e-08!46;UBERON:0004121!5.39e-08!169;UBERON:0000924!8.38e-08!173;UBERON:0006601!8.38e-08!173;UBERON:0000922!1.03e-07!612;UBERON:0000153!1.05e-07!129;UBERON:0007811!1.05e-07!129;UBERON:0001444!3.80e-07!48;UBERON:0005177!8.61e-07!107;UBERON:0001008!9.17e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001041;6.20e-14;14!UBERON:0004211;7.33e-11;10!UBERON:0009773;7.33e-11;10!UBERON:0001231;7.33e-11;10!UBERON:0004810;7.33e-11;10!UBERON:0001044;2.20e-09;6!UBERON:0003293;2.20e-09;6!UBERON:0003294;2.20e-09;6!UBERON:0010047;2.20e-09;6!UBERON:0003408;2.20e-09;6!UBERON:0000167;2.20e-09;6!UBERON:0006554;6.96e-09;30!UBERON:0001008;6.96e-09;30!UBERON:0006555;2.93e-08;15!UBERON:0004819;2.93e-08;15!UBERON:0001285;2.93e-08;15!UBERON:0007684;2.93e-08;15!UBERON:0004921;1.36e-07;33!UBERON:0000365;2.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.45e-15,160;UBERON:0000925,5.45e-15,160;UBERON:0006595,5.45e-15,160;UBERON:0001041,2.50e-12,87;UBERON:0004921,6.03e-12,118;UBERON:0001004,6.36e-12,74;UBERON:0001007,1.40e-11,145;UBERON:0001555,1.40e-11,145;UBERON:0007026,1.40e-11,145;UBERON:0004810,1.59e-10,10;UBERON:0001044,4.73e-09,6;UBERON:0003293,4.73e-09,6;UBERON:0003294,4.73e-09,6;UBERON:0010047,4.73e-09,6;UBERON:0000167,4.73e-09,6;UBERON:0005177,1.10e-08,101;UBERON:0000065,1.80e-08,54;UBERON:0004211,4.60e-08,15;UBERON:0009773,4.60e-08,15;UBERON:0001231,4.60e-08,15;UBERON:0001285,4.60e-08,15;UBERON:0007684,4.60e-08,15;UBERON:0004208,4.60e-08,15;UBERON:0000365,8.83e-08,5;UBERON:0006555,2.04e-07,16;UBERON:0004819,2.04e-07,16;UBERON:0006554,2.76e-07,47;UBERON:0001008,4.96e-07,48 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.982935746006035,2.79120467188971,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0.626909442956176,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,1.83884244895785,2.409647350226,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945348171640679,0.443458794925128,0.614843499851882,0.392937226493138,4.00724817121796,1.11235332835329,0.324547393654683,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,1.25849830862972,0.550236083880135,0,0,0.71153252537342,0,1.20848795132744,0,0.976248230192678,0.367663080345869,1.62028389576352,0.0892997282840798,0.44905874525234,0.112611480483322,3.06633274931766,0,0.732806975721629,0,0,4.36094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.468642863667593,0,0.570471821544449,0,0.352303495931295,0,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.573609190778008,0.731842236777572,1.32529768321485,1.04574548582567,0.829288440122964,1.26160425437814,0.36497735907583,0,0,0,0,0,0.473227200159376,1.34867752062481,0.723033089650446,1.7647035637183,1.96091499683166,0.949082476444386,0.674156540800822,0.588664395376038,1.15424147083917,0,0,0,0,1.26755034821831,0,4.72631925345123,0,0.860919069801795,0.171567810298526,1.53650399572076,2.24803506515239,0.502644862058154,1.66659201285353,0,0,1.44331342025273,0.811512834825538,0.352226082707465,1.01056513432752,0.462985512576611,0,0,0,0,0,0.148631162288728,0,1.00789276919316,0.283550194484773,1.43293636324557,0.871901815541886,1.15014803749563,0,0,0,0,0,0,1.14596527667483,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.368738337083406,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,1.20859449591622,0,2.85451065701279,0,0,0,3.60959690325929,1.07821471946181,4.70609861506113,1.46139224653261,1.47772280450026,0,0,0.647747748306418,0,0.812839312631559,2.00675909541941,1.01950509218015,3.3243040357149,1.34324852833307,0,0,0.512900250232778,1.31205858279882,0.976135183992909,1.13345112812495,0.366277859273374,0.247528499761764,0.574265537996172,0,0,0,0,0,0,0,0,0.170453254832202,0.0890320356467374,1.15699440752685,1.15314040419064,2.67986696238627,3.33820676823315,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0.7133421029625,0,0,0,0,0,1.73199802905922,1.34060455107157,3.26672954583968,1.41215701165169,2.58303223602738,3.36942951335251,1.33029046061003,1.83778720165568,0,0,0,0,0,0,0,0,0.213648142254946,0,1.96032172784825,1.30062222588003,0.721346064882224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,1.47787785689595,0,0,0.503865495708552,1.73856760253663,0.369254416383208,0,0.988551862620595,1.07412704805365,0,0.0986434056369336,0,0,0,0.0927680981618513,0,1.04171104434093,0.874599999961957,1.44999915086959,4.09656413827799,2.2882828526349,0.945550727071745,0.689486746482929,0.583209226766509,0.520874984799877,0,0.241192877250816,1.52581736317083,0.774054819518572,2.06883333267483,0,3.59496929612668,0,0.769502585037971,0,1.38338342632836,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0.451191321234361,1.56850027454192,1.1747511088309,1.13852239634511,0,0.210998064528027,0,0.706765357169704,1.51472047819464,0,0.0884575645033392,0,0.296521128680622,0.494255755786011,0.208843899010911,0.337005664903385,0,0.702793337176017,2.00700268137233,1.56531695145672,0.242780379534093,0.789168805698781,0,0.30607276163049,0.126373159256976,2.25485129121739,0.518440956986236,1.32930774541437,0.330991955875499,0.313932918407225,0,0.284609546029793,0,0.694238953340524,5.48757425520515,4.35296032902013,0.17472666824203,1.54787429224455,1.74161396320353,1.97341156132701,2.38134825454307,2.5217144286989,0,1.12990370390266,2.46675464364152,1.19228767021794,0.379864775735272,1.75996244461323,1.84365286578528,0.640358984218058,2.19790570540343,2.73771792592801,1.25990255782507,0.343189995723929,3.45731515171559,0.248505071130865,8.72067928082143,0.951329442515298,0.627617077873999,0.203996435272644,0.288950589901519,0,0.410716136675979,0,0.859530882839914,0,0,0,0,0.399358000997982,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0,0.885847333632739,0,0,0,0.643012593860077,0.687697182986169,0.83088067605837,0,0.77380195455795,0.546746009922222,0.670869375198532,0.551639951094387,0.734364233889974,0,0.35857467866569,3.07064315711112,0,0,0,1.08599920350743,0,0,1.197301915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| |||
|short_description=p@chr11:66495591..66495624,- | |||
}} |
Revision as of 08:53, 11 January 2014
Short description: | p@chr11:66495591..66495624, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66495591..66495624, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.01e-34 | 253 |
endo-epithelial cell | 1.54e-17 | 42 |
endodermal cell | 2.24e-15 | 58 |
respiratory epithelial cell | 3.83e-12 | 13 |
kidney tubule cell | 1.59e-10 | 10 |
nephron tubule epithelial cell | 1.59e-10 | 10 |
epithelial cell of alimentary canal | 2.64e-10 | 20 |
epithelial cell of nephron | 4.60e-08 | 15 |
epithelial cell of tracheobronchial tree | 8.79e-08 | 9 |
epithelial cell of lower respiratory tract | 8.79e-08 | 9 |
squamous epithelial cell | 1.09e-07 | 63 |
kidney cell | 7.54e-07 | 17 |
kidney epithelial cell | 7.54e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.45e-15 | 160 |
endoderm | 5.45e-15 | 160 |
presumptive endoderm | 5.45e-15 | 160 |
foregut | 2.50e-12 | 87 |
subdivision of digestive tract | 6.03e-12 | 118 |
respiratory system | 6.36e-12 | 74 |
digestive system | 1.40e-11 | 145 |
digestive tract | 1.40e-11 | 145 |
primitive gut | 1.40e-11 | 145 |
nephron tubule epithelium | 1.59e-10 | 10 |
saliva-secreting gland | 4.73e-09 | 6 |
gland of oral region | 4.73e-09 | 6 |
gland of foregut | 4.73e-09 | 6 |
oral gland | 4.73e-09 | 6 |
oral cavity | 4.73e-09 | 6 |
trunk region element | 1.10e-08 | 101 |
respiratory tract | 1.80e-08 | 54 |
nephron epithelium | 4.60e-08 | 15 |
renal tubule | 4.60e-08 | 15 |
nephron tubule | 4.60e-08 | 15 |
nephron | 4.60e-08 | 15 |
uriniferous tubule | 4.60e-08 | 15 |
nephrogenic mesenchyme | 4.60e-08 | 15 |
urothelium | 8.83e-08 | 5 |
excretory tube | 2.04e-07 | 16 |
kidney epithelium | 2.04e-07 | 16 |
urinary system structure | 2.76e-07 | 47 |
renal system | 4.96e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.60e-18 | 14 |
carcinoma | 1.12e-16 | 106 |
cell type cancer | 4.55e-16 | 143 |
cancer | 3.53e-12 | 235 |
disease of cellular proliferation | 4.48e-12 | 239 |