FFCP PHASE1:Hg19::chr11:102668074..102668126,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=4312 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7155 | |||
|TSSclassifier=strong | |||
|UniProt=Q53G97 | |||
|association_with_transcript=0bp_to_AK223034_5end | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_3_at_MMP1_5end | |||
|id=chr11:102668074..102668126,- | |||
|ontology_enrichment_celltype=CL:0000359!1.10e-24!32;CL:0000192!1.63e-22!42;CL:0000514!1.63e-22!42;CL:0000055!2.88e-19!180;CL:0000187!2.53e-16!54;CL:0000222!3.78e-16!119;CL:0000183!2.69e-15!59;CL:0000680!6.10e-15!57;CL:0000056!6.10e-15!57;CL:0000355!6.10e-15!57;CL:0000393!1.05e-13!60;CL:0000211!1.05e-13!60;CL:0002139!5.21e-13!24;CL:0000220!1.37e-12!246;CL:0002321!2.55e-12!248;CL:0002371!1.40e-11!591;CL:0002539!2.31e-11!10;CL:0000071!2.48e-10!18;CL:0002546!2.48e-10!18;CL:0000548!2.80e-10!679;CL:0000004!2.80e-10!679;CL:0000255!2.80e-10!679;CL:0000144!3.13e-10!625;CL:0000012!4.67e-10!682;CL:0000057!1.15e-09!75;CL:1000413!4.06e-09!9;CL:0000115!2.46e-08!35;CL:0000048!3.49e-08!430;CL:0000723!4.58e-08!436;CL:0002494!1.34e-07!16;CL:0000034!1.80e-07!444;CL:0000003!2.83e-07!722;CL:0002594!6.05e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.55e-40;32!CL:0000192;8.96e-22;43!CL:0002539;2.46e-19;10!CL:0002139;1.54e-16;24!CL:1000413;3.32e-12;9!CL:0000071;1.78e-11;18!CL:0002594;3.67e-11;4!CL:0000115;7.09e-11;36!CL:1000306;1.34e-10;4!CL:0002547;1.34e-10;4!CL:0000187;6.49e-10;55!CL:0002544;7.84e-10;6!CL:0002595;1.32e-09;5!CL:0002551;1.97e-09;6!CL:0002592;2.59e-09;3!CL:0000393;6.32e-09;61!CL:0000211;6.32e-09;61!CL:0002582;5.21e-08;3!CL:0002494;1.58e-07;16!CL:0002593;8.66e-07;2!CL:0002138;8.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.62e-42,32;CL:0000192,1.63e-29,43;CL:0000514,1.63e-29,43;CL:0000222,1.06e-21,121;CL:0000187,1.59e-21,55;CL:0000680,4.72e-20,58;CL:0000056,4.72e-20,58;CL:0000355,4.72e-20,58;CL:0002539,2.29e-19,10;CL:0000393,9.99e-19,61;CL:0000211,9.99e-19,61;CL:0002139,1.70e-16,24;CL:1000413,3.27e-12,9;CL:0000115,2.06e-11,36;CL:0000071,2.23e-11,18;CL:0002546,2.23e-11,18;CL:0002594,3.87e-11,4;CL:0002321,7.99e-11,250;CL:1000306,1.28e-10,4;CL:0002547,1.28e-10,4;CL:0002544,8.83e-10,6;CL:0002595,1.30e-09,5;CL:0002551,1.46e-09,6;CL:0002592,2.70e-09,3;CL:0002078,1.97e-08,45;CL:0000048,3.45e-08,427;CL:0002582,5.28e-08,3;CL:0000723,7.11e-08,433;CL:0002494,1.44e-07,16;CL:0000034,1.80e-07,441;CL:0005020,7.35e-07,6;CL:0002138,7.35e-07,6;CL:0005022,7.35e-07,6;CL:0002593,8.44e-07,2;CL:0000569,9.50e-07,4;CL:0000011,9.50e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;8.96e-22;43!CL:0002546;1.78e-11;18!CL:0000355;1.20e-09;58!CL:0005022;8.73e-07;6 | |||
|ontology_enrichment_disease=DOID:2394!8.36e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!3.91e-43!42;UBERON:0003509!3.91e-43!42;UBERON:0004572!3.91e-43!42;UBERON:0000055!5.66e-37!69;UBERON:0001981!1.55e-36!60;UBERON:0007500!1.55e-36!60;UBERON:0004537!1.55e-36!60;UBERON:0006965!1.55e-36!60;UBERON:0004872!5.83e-33!84;UBERON:0004573!1.70e-32!33;UBERON:0004571!1.70e-32!33;UBERON:0002049!4.26e-30!79;UBERON:0007798!4.26e-30!79;UBERON:0004535!6.39e-25!110;UBERON:0001009!9.08e-24!113;UBERON:0003914!2.42e-22!118;UBERON:0000947!2.40e-19!21;UBERON:0010191!2.40e-19!21;UBERON:0004290!7.94e-17!70;UBERON:0000486!2.26e-16!82;UBERON:0000914!4.28e-15!83;UBERON:0002329!4.28e-15!83;UBERON:0003077!4.28e-15!83;UBERON:0003059!4.28e-15!83;UBERON:0007282!4.28e-15!83;UBERON:0009618!4.28e-15!83;UBERON:0007285!4.28e-15!83;UBERON:0000490!1.94e-14!138;UBERON:0002385!1.83e-13!63;UBERON:0001015!1.83e-13!63;UBERON:0000383!1.83e-13!63;UBERON:0001134!2.52e-13!61;UBERON:0002036!2.52e-13!61;UBERON:0003082!2.52e-13!61;UBERON:0004237!2.31e-11!10;UBERON:0004695!2.31e-11!10;UBERON:0002111!2.31e-11!10;UBERON:0004178!2.31e-11!10;UBERON:0004111!1.58e-10!241;UBERON:0001986!2.48e-10!18;UBERON:0004638!2.48e-10!18;UBERON:0004852!2.48e-10!18;UBERON:0001135!1.77e-09!15;UBERON:0003915!4.06e-09!9;UBERON:0004700!4.06e-09!9;UBERON:0001917!4.06e-09!9;UBERON:0000487!5.43e-09!22;UBERON:0000477!1.22e-08!286;UBERON:0000992!5.05e-08!13;UBERON:0003081!6.15e-08!216;UBERON:0003498!1.09e-07!5;UBERON:0005985!1.09e-07!5;UBERON:0003102!1.24e-07!95;UBERON:0000025!1.25e-07!194;UBERON:0005256!1.79e-07!143;UBERON:0006914!1.84e-07!25;UBERON:0000483!3.11e-07!309;UBERON:0000119!5.47e-07!312;UBERON:0001310!6.05e-07!4;UBERON:0001828!8.11e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.13e-51;33!UBERON:0004571;7.13e-51;33!UBERON:0001637;1.46e-49;42!UBERON:0003509;1.46e-49;42!UBERON:0004572;1.46e-49;42!UBERON:0000947;2.55e-34;21!UBERON:0010191;2.55e-34;21!UBERON:0007500;9.02e-30;56!UBERON:0001981;9.02e-30;56!UBERON:0004537;9.02e-30;56!UBERON:0000055;3.50e-29;65!UBERON:0002049;1.88e-20;75!UBERON:0007798;1.88e-20;75!UBERON:0004237;2.46e-19;10!UBERON:0004695;2.46e-19;10!UBERON:0002111;2.46e-19;10!UBERON:0004178;2.46e-19;10!UBERON:0003914;4.72e-19;74!UBERON:0001135;2.95e-12;15!UBERON:0003915;3.32e-12;9!UBERON:0004700;3.32e-12;9!UBERON:0001917;3.32e-12;9!UBERON:0004638;1.78e-11;18!UBERON:0001986;1.78e-11;18!UBERON:0004852;1.78e-11;18!UBERON:0001310;3.67e-11;4!UBERON:0004535;6.53e-11;109!UBERON:0004797;1.34e-10;4!UBERON:0000415;1.34e-10;4!UBERON:0007240;1.34e-10;4!UBERON:0005742;1.34e-10;4!UBERON:0005734;1.34e-10;4!UBERON:0004664;1.34e-10;4!UBERON:0004663;1.34e-10;4!UBERON:0001009;1.60e-10;112!UBERON:0000025;6.57e-10;93!UBERON:0003834;1.32e-09;5!UBERON:0001533;1.32e-09;5!UBERON:0003498;2.59e-09;3!UBERON:0005985;2.59e-09;3!UBERON:0001621;2.59e-09;3!UBERON:0000487;5.13e-09;22!UBERON:0002067;1.32e-08;9!UBERON:0006914;1.07e-07;25!UBERON:0003513;8.21e-07;7!UBERON:0002456;8.66e-07;2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,8.0679017574213,5.42425075221579,2.92124036154949,6.8310591830671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0.47296445977717,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0.795285947051099,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,2.18638648103376,4.30117297553062,1.04142150482278,1.69592382577203,0.419499436209906,2.20094433552054,2.92592953151535,0,4.98072767761394,3.68192674041137,2.01414658554573,0,0.488124115096339,0,2.43042584364528,0,0,0,3.06633274931766,0.949265659568129,2.19842092716489,0,0,0,0,7.21793916488105,1.58891016975863,3.15520282823695,4.965357350777,0.560677600142307,0,6.41335625884616,0,0.404132016209064,0.653847612453835,0,0,0,2.49728061464256,1.1409436430889,0,1.996386476944,1.94247533241758,2.24721290723598,0.408308342509787,1.59684612505298,0.826606249406124,0,0.494533858557114,0,0,0,0.375355559615893,0.554128230968366,0,0,0.45071417671979,0.113432183160021,0,0,0,0.900273288253207,0.515262646192195,0,0,0.506328996723799,0,0.252433774244115,0.0920498986422993,0,0,0,0,1.15956511897978,0.545492241181669,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,2.59859605969933,1.38895653772983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,3.381211010224,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0.368738337083406,1.21637060255316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86469438393543,2.84098760501003,1.31403449622095,3.63478100428535,3.37010097533882,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,1.53084334748864,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.2023155617111,0,2.51849877464512,2.0911118104818,1.23213432070436,5.32306030317022,3.47973196830029,11.675425803547,0.286249773483982,0,0,0,0,0,1.59101623962968,14.1290755235861,0,0,0.235624804691373,6.2676569287728,15.8510321173008,16.4290797933203,0,14.8665228675083,14.7910205459458,0.136499911407986,0.848432591722276,3.39024349860728,0,18.5762913067542,28.4993075414946,0,0,4.05820753925408,4.957175969596,5.63391205064483,0,0,4.280052617775,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,3.11039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95501140960464,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17199840701485,0,2.28611152076586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27473676312472,0,3.52898729547258,0,0,0.895528817321244,0.934853239388898,0,0.378806010550178,0,0,3.8902811627477,0,3.73049281398673,23.0654033983829,1.11507737014592,2.69881867298163,0.776314784381297,0,0.265841714557995,1.04349012362347,0,0,0.813741466409323,11.6383141889638,0.214821114084977,1.85613503951397,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,2.02516545277025,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0,0,2.0710797781803,0,0,0,0,0,13.1017534008077,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,3.1020638566432,2.8666168169323,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26101077806331,0,0,0,0,0,0.0717222053926763,0,0.162806537221949,0,0,1.79650404213174,0,0,0,0,0,0 | |||
|short_description=p3@MMP1 | |||
}} |
Revision as of 10:03, 11 January 2014
Short description: | p3@MMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_3_at_MMP1_5end |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | 0bp_to_AK223034_5end |
EntrezGene: | MMP1 |
HGNC: | 7155 |
UniProt: | Q53G97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data