FFCP PHASE1:Hg19::chr12:6451235..6451281,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7132 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11916 | |||
|TSSclassifier=strong | |||
|UniProt=P19438,F5H6V7,F5GWJ4 | |||
|association_with_transcript=0bp_to_ENST00000162749,ENST00000440083,ENST00000534885,uc001qnu.2,uc009zek.2,uc010sey.1,uc010sez.1,uc010sfa.1_5end | |||
|description=CAGE_peak_1_at_TNFRSF1A_5end | |||
|id=chr12:6451235..6451281,- | |||
|ontology_enrichment_celltype=CL:0000220!3.62e-14!246;CL:0002321!1.14e-13!248;CL:0000222!2.96e-12!119;CL:0000066!1.78e-10!254;CL:1000497!7.13e-10!18;CL:0002518!7.13e-10!18;CL:1000449!1.64e-09!16;CL:0000055!2.21e-09!180;CL:0000183!1.17e-08!59;CL:0002681!9.70e-08!13;CL:0002584!9.70e-08!13;CL:1000507!3.79e-07!12;CL:1000494!3.79e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.96e-09;17!CL:0002518;1.96e-09;17!CL:1000449;4.41e-09;15!CL:0002681;2.61e-07;12!CL:0002584;2.61e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.59e-14,250;CL:0000222,5.52e-13,121;CL:0000066,3.21e-10,253;CL:1000497,1.82e-09,17;CL:0002518,1.82e-09,17;CL:1000449,4.14e-09,15;CL:0002681,2.46e-07,12;CL:0002584,2.46e-07,12;CL:0002078,4.51e-07,45;CL:0000187,8.53e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!4.51e-15!118;UBERON:0002100!2.80e-12!216;UBERON:0000481!5.88e-12!347;UBERON:0004872!3.49e-11!84;UBERON:0003104!4.10e-11!238;UBERON:0009142!4.10e-11!238;UBERON:0002049!4.80e-11!79;UBERON:0007798!4.80e-11!79;UBERON:0000468!1.89e-10!659;UBERON:0000467!3.35e-10!625;UBERON:0000490!3.38e-10!138;UBERON:0003103!3.85e-10!69;UBERON:0000480!6.48e-10!626;UBERON:0005256!6.79e-10!143;UBERON:0000119!9.19e-10!312;UBERON:0004535!1.51e-09!110;UBERON:0001009!1.56e-09!113;UBERON:0004211!1.64e-09!16;UBERON:0001285!1.64e-09!16;UBERON:0007684!1.64e-09!16;UBERON:0003220!1.64e-09!16;UBERON:0004208!1.64e-09!16;UBERON:0001008!2.41e-09!45;UBERON:0000483!3.71e-09!309;UBERON:0004876!4.74e-09!20;UBERON:0000926!4.87e-09!448;UBERON:0004120!4.87e-09!448;UBERON:0006603!4.87e-09!448;UBERON:0006555!5.48e-09!17;UBERON:0005103!5.48e-09!17;UBERON:0000083!5.48e-09!17;UBERON:0009201!5.48e-09!17;UBERON:0004819!5.48e-09!17;UBERON:0006553!5.48e-09!17;UBERON:0003074!5.48e-09!17;UBERON:0003060!5.48e-09!17;UBERON:0006554!5.50e-09!44;UBERON:0000080!1.13e-08!18;UBERON:0002120!1.13e-08!18;UBERON:0004875!1.13e-08!18;UBERON:0005721!1.13e-08!18;UBERON:0005754!1.13e-08!18;UBERON:0007297!1.13e-08!18;UBERON:0001048!1.36e-08!168;UBERON:0000475!2.90e-08!365;UBERON:0002050!3.37e-08!605;UBERON:0005423!3.37e-08!605;UBERON:0009569!3.50e-08!113;UBERON:0000923!4.33e-08!604;UBERON:0005291!4.33e-08!604;UBERON:0006598!4.33e-08!604;UBERON:0002532!4.33e-08!604;UBERON:0005177!5.97e-08!107;UBERON:0000922!6.84e-08!612;UBERON:0000353!7.70e-08!17;UBERON:0000477!8.80e-08!286;UBERON:0001225!9.70e-08!13;UBERON:0008987!9.70e-08!13;UBERON:0002113!1.06e-07!27;UBERON:0003918!1.06e-07!27;UBERON:0005095!1.06e-07!27;UBERON:0007687!1.06e-07!27;UBERON:0001981!1.48e-07!60;UBERON:0007500!1.48e-07!60;UBERON:0004537!1.48e-07!60;UBERON:0006965!1.48e-07!60;UBERON:0003887!1.95e-07!21;UBERON:0000489!2.01e-07!32;UBERON:0003064!2.96e-07!37;UBERON:0000055!3.03e-07!69;UBERON:0009773!3.79e-07!12;UBERON:0001231!3.79e-07!12;UBERON:0004810!3.79e-07!12;UBERON:0000058!3.94e-07!26;UBERON:0000019!7.09e-07!19;UBERON:0000047!7.09e-07!19;UBERON:0004088!7.09e-07!19;UBERON:0003072!7.09e-07!19;UBERON:0003071!7.09e-07!19;UBERON:0004128!7.09e-07!19;UBERON:0000970!7.40e-07!20;UBERON:0001801!9.41e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.67e-09;30!UBERON:0001008;2.67e-09;30!UBERON:0006555;4.41e-09;15!UBERON:0004819;4.41e-09;15!UBERON:0001285;4.41e-09;15!UBERON:0007684;4.41e-09;15!UBERON:0002113;9.85e-08;24!UBERON:0011143;9.85e-08;24!UBERON:0000353;1.72e-07;15!UBERON:0000489;2.22e-07;29!UBERON:0001225;2.61e-07;12!UBERON:0008987;2.61e-07;12!UBERON:0000019;7.11e-07;19!UBERON:0000047;7.11e-07;19!UBERON:0004088;7.11e-07;19!UBERON:0010230;7.11e-07;19!UBERON:0003914;7.25e-07;74!UBERON:0000970;7.37e-07;20!UBERON:0001801;9.23e-07;14 | |||
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| |||
|short_description=p1@TNFRSF1A | |||
}} |
Revision as of 11:39, 11 January 2014
Short description: | p1@TNFRSF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFRSF1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000162749, ENST00000440083, ENST00000534885, uc001qnu.2, uc009zek.2, uc010sey.1, uc010sez.1, uc010sfa.1_5end |
EntrezGene: | TNFRSF1A |
HGNC: | 11916 |
UniProt: | P19438F5H6V7F5GWJ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.59e-14 | 250 |
mesodermal cell | 5.52e-13 | 121 |
epithelial cell | 3.21e-10 | 253 |
kidney cell | 1.82e-09 | 17 |
kidney epithelial cell | 1.82e-09 | 17 |
epithelial cell of nephron | 4.14e-09 | 15 |
kidney cortical cell | 2.46e-07 | 12 |
renal cortical epithelial cell | 2.46e-07 | 12 |
meso-epithelial cell | 4.51e-07 | 45 |
muscle cell | 8.53e-07 | 55 |