FFCP PHASE1:Hg19::chr12:14927297..14927347,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55766 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14456 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BTM1 | |||
|association_with_transcript=-5bp_to_ENST00000389078_5end | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_1_at_H2AFJ_5end | |||
|id=chr12:14927297..14927347,+ | |||
|ontology_enrichment_celltype=CL:0000183!8.06e-18!59;CL:0000680!6.58e-17!57;CL:0000056!6.58e-17!57;CL:0000355!6.58e-17!57;CL:0000187!3.27e-16!54;CL:0000192!1.97e-15!42;CL:0000514!1.97e-15!42;CL:0000222!2.15e-15!119;CL:0000359!2.52e-12!32;CL:0000393!2.80e-12!60;CL:0000211!2.80e-12!60;CL:0000055!3.05e-11!180;CL:0000136!7.91e-09!15;CL:0000220!8.37e-08!246;CL:0002321!2.56e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.04e-11;32!CL:0000192;3.76e-11;43!CL:0000187;1.88e-09;55!CL:0000136;3.90e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.40e-17,58;CL:0000056,6.40e-17,58;CL:0000355,6.40e-17,58;CL:0000187,3.20e-16,55;CL:0000222,1.40e-15,121;CL:0000192,2.08e-15,43;CL:0000514,2.08e-15,43;CL:0000393,2.50e-12,61;CL:0000211,2.50e-12,61;CL:0000359,2.52e-12,32;CL:0000136,7.91e-09,15;CL:0002321,1.83e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;3.76e-11;43!CL:0000355;4.02e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.19e-23!448;UBERON:0004120!2.19e-23!448;UBERON:0006603!2.19e-23!448;UBERON:0003104!4.17e-23!238;UBERON:0009142!4.17e-23!238;UBERON:0002100!4.41e-21!216;UBERON:0005256!2.79e-18!143;UBERON:0003914!2.12e-16!118;UBERON:0004535!2.75e-16!110;UBERON:0001009!2.76e-16!113;UBERON:0004290!5.38e-16!70;UBERON:0000914!1.39e-15!83;UBERON:0002329!1.39e-15!83;UBERON:0003077!1.39e-15!83;UBERON:0003059!1.39e-15!83;UBERON:0007282!1.39e-15!83;UBERON:0009618!1.39e-15!83;UBERON:0007285!1.39e-15!83;UBERON:0001134!1.90e-15!61;UBERON:0002036!1.90e-15!61;UBERON:0003082!1.90e-15!61;UBERON:0002385!5.94e-15!63;UBERON:0001015!5.94e-15!63;UBERON:0000383!5.94e-15!63;UBERON:0004872!7.95e-15!84;UBERON:0002049!2.86e-14!79;UBERON:0007798!2.86e-14!79;UBERON:0000486!3.42e-14!82;UBERON:0000490!6.35e-14!138;UBERON:0001981!1.91e-12!60;UBERON:0007500!1.91e-12!60;UBERON:0004537!1.91e-12!60;UBERON:0006965!1.91e-12!60;UBERON:0000055!1.93e-12!69;UBERON:0001637!2.00e-11!42;UBERON:0003509!2.00e-11!42;UBERON:0004572!2.00e-11!42;UBERON:0000481!7.12e-11!347;UBERON:0009569!3.97e-10!113;UBERON:0004573!7.68e-09!33;UBERON:0004571!7.68e-09!33;UBERON:0003081!1.80e-08!216;UBERON:0000468!1.87e-08!659;UBERON:0004119!4.23e-08!169;UBERON:0000925!4.23e-08!169;UBERON:0006595!4.23e-08!169;UBERON:0000915!8.85e-08!52;UBERON:0000077!2.04e-07!130;UBERON:0004921!3.46e-07!129;UBERON:0004185!3.46e-07!129;UBERON:0001007!5.00e-07!155;UBERON:0001555!5.00e-07!155;UBERON:0007026!5.00e-07!155;UBERON:0003103!5.99e-07!69;UBERON:0001048!7.50e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.44e-08;42!UBERON:0003509;4.44e-08;42!UBERON:0004572;4.44e-08;42!UBERON:0004573;6.98e-08;33!UBERON:0004571;6.98e-08;33!UBERON:0007500;6.98e-07;56!UBERON:0001981;6.98e-07;56!UBERON:0004537;6.98e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.75e-21,199;UBERON:0003104,1.51e-18,160;UBERON:0009142,1.51e-18,160;UBERON:0007503,3.47e-18,78;UBERON:0005256,7.88e-17,122;UBERON:0003914,2.52e-16,117;UBERON:0002329,4.89e-16,71;UBERON:0003059,4.89e-16,71;UBERON:0007282,4.89e-16,71;UBERON:0004290,4.89e-16,71;UBERON:0009618,4.89e-16,71;UBERON:0004535,5.02e-16,109;UBERON:0001009,5.04e-16,112;UBERON:0001134,1.77e-15,62;UBERON:0002036,1.77e-15,62;UBERON:0003082,1.77e-15,62;UBERON:0003077,2.62e-15,72;UBERON:0007285,2.62e-15,72;UBERON:0007524,3.87e-15,73;UBERON:0002385,5.46e-15,64;UBERON:0001015,5.46e-15,64;UBERON:0000383,5.46e-15,64;UBERON:0000490,6.21e-15,148;UBERON:0004872,1.45e-14,83;UBERON:0000486,2.97e-14,83;UBERON:0002049,5.22e-14,78;UBERON:0007798,5.22e-14,78;UBERON:0000926,5.37e-14,315;UBERON:0004120,5.37e-14,315;UBERON:0006603,5.37e-14,315;UBERON:0007500,3.46e-12,59;UBERON:0001981,3.46e-12,59;UBERON:0004537,3.46e-12,59;UBERON:0006965,3.46e-12,59;UBERON:0000055,3.47e-12,68;UBERON:0001637,2.00e-11,42;UBERON:0003509,2.00e-11,42;UBERON:0004572,2.00e-11,42;UBERON:0009569,9.13e-10,112;UBERON:0004573,7.68e-09,33;UBERON:0004571,7.68e-09,33;UBERON:0004119,8.04e-09,160;UBERON:0000925,8.04e-09,160;UBERON:0006595,8.04e-09,160;UBERON:0001048,4.43e-08,160;UBERON:0004921,5.71e-08,118;UBERON:0001007,1.22e-07,145;UBERON:0001555,1.22e-07,145;UBERON:0007026,1.22e-07,145;UBERON:0003081,1.39e-07,203;UBERON:0001041,1.91e-07,87;UBERON:0000915,1.96e-07,52;UBERON:0003103,7.04e-07,68 | |||
|phase1_expression=200.936287473236,285.395998346681,221.721277642963,444.325444687899,438.468833633169,268.680265422914,648.447688110875,116.868176583964,206.859017534272,109.843069616174,367.741215521469,96.1142037372758,121.06904300686,199.635127324555,238.606110524099,181.527789541979,182.616441991265,229.317368381635,139.548780454085,82.3679878533711,106.284360138256,53.2873026512749,45.511521953838,35.3136016688041,43.8143812185862,5.04328477936478,6.15754420874593,7.00525953691745,54.6776344819977,37.6152810135268,38.5492147057029,132.396656324966,90.361775633475,136.439229751545,0,2.41687695228617,41.1040615068786,37.1176923716358,34.8947338598047,35.5897827973997,88.89444327325,56.6813915533214,56.4090493118869,35.3317720234342,26.8291920019055,38.5708657288628,44.1615170120801,27.5482484974623,38.0938836200977,45.1677055945776,39.4487488054815,43.0397658397225,44.4721928150238,40.0200503821972,35.2108865145289,44.2369497925121,30.019676506363,35.0568635734332,40.70915768533,35.6231220054464,30.688182038354,38.9224534220325,35.5045310566505,38.7864522984752,55.4299645780595,43.1212770765266,45.466024176677,55.2747063564835,42.2401163920363,45.8268462327796,50.2481587185696,43.0884834105451,47.1528957286918,46.0536524160033,60.8048297900025,44.2379742022673,53.2437711634387,67.7297786715193,36.8061593536314,69.2580967291234,84.1417544552151,54.4339178218609,35.1992488922645,22.3916830617474,16.9006758234075,16.6424786800938,15.2150475073685,28.1628695577697,15.2040320740518,31.483773899667,10.2458334439701,17.0298784917572,21.4073007750128,55.5119580031909,61.655941927969,40.0343808858117,31.0801436779856,43.2311839024081,48.5219537638842,38.2857074444653,64.2066865268173,69.5968274430058,68.189354942769,54.0340715893092,70.7054177939609,62.6940921671648,37.3709331995721,37.9150306387998,34.7258457984875,72.1882401210138,65.2186041974602,69.5527405764126,41.0753779958907,39.8635833853672,51.2224066644386,43.8507156239581,55.1837510786767,63.9147048597692,34.1576584226329,36.316457232947,32.5541726928209,43.7207940446252,30.7173242918656,30.2048402324427,37.4792179657038,36.7004740668226,46.8042958244997,34.2731463482045,35.5695460392065,34.7578569318718,107.275021178143,289.742771391971,145.379732816094,68.311999800683,159.425455582213,125.437085420073,56.465302240628,87.1076417841718,49.7253138282997,52.3281378011651,56.47776720068,197.058019086309,146.811001181895,133.853183845179,46.085729898965,51.8906617151816,50.5240249971688,22.1796280603968,34.3196946468077,31.2024301116835,71.1569418372804,61.936890847641,84.0080013890378,110.800356617106,94.8068725834387,72.3560450302377,79.8360772170616,54.7843529438977,49.8072767761394,34.476223114761,102.318646545723,92.7531968976585,94.6960783286898,62.8703867391435,113.419872703446,73.2257771929454,93.1796896398605,86.0351710892582,65.9261541103298,80.6875810632909,71.082276644998,26.3560834872127,11.6334079244498,164.843551709878,95.4186147255012,108.142456961551,84.74187572046,34.9940677313553,62.7763036491092,79.6162192202076,191.080702356172,127.033787434837,143.779498354692,181.859407294079,171.634998269132,121.691371826525,114.08283304704,156.292395033142,79.6008195917317,106.678230628812,100.728410691914,64.8238432513582,57.3030223063186,42.8374960441858,119.430190184113,68.7872176945901,97.6428632110983,110.484265727231,109.539249670401,229.360663208383,465.664555896922,78.1079568746867,65.5621044129092,52.6421819419948,74.1872179288616,140.064922680152,118.838304595118,175.252722982232,26.011497174885,60.223183646836,60.8244556327942,32.7099294731998,55.2361556718032,60.5455269107229,105.34214068368,33.4177137837707,84.5753204799204,44.17591049272,61.3972823944137,55.1213053752149,36.5659880292113,75.4633215725026,82.067326678276,53.9197780325598,37.911710762126,39.0054249729045,15.978555502977,13.38550660047,26.4922189742502,24.3603479286121,20.4379889209259,34.307871753128,134.546597803642,138.29680171147,133.990873711906,241.935690504661,233.888952060946,217.329591673193,198.92993429216,214.981838656066,225.551174237746,195.002102462704,201.680026244432,240.404222449573,214.666282847129,257.780595154082,115.89040637607,152.863533445756,192.616637303095,317.538816592771,39.2940607947676,34.3989525837169,54.9434613213706,1.7658523976586,94.0861554854819,66.0536069649323,50.704631858785,87.6733675409433,35.9893721233638,51.756940843618,160.29768621268,132.071717730506,41.8560891873293,32.9242350129218,61.0525210026273,94.8487561790255,180.101364392302,126.138502931539,775.190514398049,710.826542214554,74.6037528444814,55.2250065728601,79.6663029867583,104.98189406519,32.5885328705788,50.613709715532,114.634909059646,70.0427791818648,80.5103626246944,52.714966454866,40.3261827780575,59.08851292912,62.9804196432121,50.3707309371256,123.693898081145,140.189752179888,295.387966969318,167.650997102251,87.094886319715,239.373417101602,265.246929481177,58.4202949439329,121.632859204485,38.5026000559988,67.47983562556,2378.41536491502,118.34238535784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| |||
|short_description=p1@H2AFJ | |||
}} |
Revision as of 12:24, 11 January 2014
Short description: | p1@H2AFJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_H2AFJ_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | -5bp_to_ENST00000389078_5end |
EntrezGene: | H2AFJ |
HGNC: | 14456 |
UniProt: | Q9BTM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.40e-17 | 58 |
myoblast | 6.40e-17 | 58 |
multi-potent skeletal muscle stem cell | 6.40e-17 | 58 |
muscle cell | 3.20e-16 | 55 |
mesodermal cell | 1.40e-15 | 121 |
smooth muscle cell | 2.08e-15 | 43 |
smooth muscle myoblast | 2.08e-15 | 43 |
electrically responsive cell | 2.50e-12 | 61 |
electrically active cell | 2.50e-12 | 61 |
vascular associated smooth muscle cell | 2.52e-12 | 32 |
fat cell | 7.91e-09 | 15 |
embryonic cell | 1.83e-07 | 250 |