FFCP PHASE1:Hg19::chr12:24858599..24858608,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr12:24858599..24858608,- | |||
|id=chr12:24858599..24858608,- | |||
|ontology_enrichment_celltype=CL:0002057!3.24e-30!42;CL:0000860!4.14e-28!45;CL:0002194!2.42e-19!63;CL:0000576!2.42e-19!63;CL:0000040!2.42e-19!63;CL:0000559!2.42e-19!63;CL:0002009!1.03e-18!65;CL:0000080!9.17e-18!6;CL:0000839!2.72e-17!70;CL:0000557!4.96e-17!71;CL:0000766!7.89e-16!76;CL:0000988!1.32e-11!182;CL:0002087!1.45e-11!119;CL:0002031!4.92e-11!124;CL:0000763!2.65e-10!112;CL:0000049!2.65e-10!112;CL:0000738!1.38e-09!140;CL:0002032!7.05e-08!165;CL:0000837!7.05e-08!165;CL:0000037!1.73e-07!172;CL:0000566!1.73e-07!172 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.06e-22!102;UBERON:0003061!3.06e-22!102;UBERON:0002193!4.27e-20!112;UBERON:0002371!5.66e-15!80;UBERON:0001474!7.74e-14!86;UBERON:0000178!2.14e-12!15;UBERON:0000179!2.14e-12!15;UBERON:0000463!2.14e-12!15;UBERON:0004765!1.40e-11!101;UBERON:0001434!1.40e-11!101;UBERON:0002331!6.85e-11!10;UBERON:0000358!6.85e-11!10;UBERON:0000307!6.85e-11!10;UBERON:0000091!6.85e-11!10;UBERON:0000087!6.85e-11!10;UBERON:0007806!6.85e-11!10;UBERON:0008780!6.85e-11!10;UBERON:0005728!6.85e-11!10;UBERON:0002405!5.37e-10!115;UBERON:0003081!1.88e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.85e-45;10!UBERON:0000178;2.01e-30;15!UBERON:0000179;2.01e-30;15!UBERON:0000463;2.01e-30;15!UBERON:0000478;2.00e-19;24!UBERON:0002390;6.20e-15;32!UBERON:0000922;9.72e-10;49!UBERON:0002193;7.50e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.85e-45,10;UBERON:0000358,4.85e-45,10;UBERON:0000307,4.85e-45,10;UBERON:0000091,4.85e-45,10;UBERON:0000087,4.85e-45,10;UBERON:0007010,4.85e-45,10;UBERON:0007806,4.85e-45,10;UBERON:0008780,4.85e-45,10;UBERON:0005728,4.85e-45,10;UBERON:0000178,2.01e-30,15;UBERON:0000179,2.01e-30,15;UBERON:0000463,2.01e-30,15;UBERON:0000478,2.00e-19,24;UBERON:0002390,7.68e-09,98;UBERON:0003061,7.68e-09,98;UBERON:0002193,4.22e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0.306083892370903,0.962787081228281,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,3.11411124497787,0,0,0,0,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6686901581256,4.2011739241811,5.63878527329459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:24858599..24858608,- | |||
}} |
Revision as of 12:40, 11 January 2014
Short description: | p@chr12:24858599..24858608, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:24858599..24858608, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.85e-45 | 10 |
blastocyst | 4.85e-45 | 10 |
blastula | 4.85e-45 | 10 |
bilaminar disc | 4.85e-45 | 10 |
inner cell mass | 4.85e-45 | 10 |
cleaving embryo | 4.85e-45 | 10 |
connecting stalk | 4.85e-45 | 10 |
inner cell mass derived epiblast | 4.85e-45 | 10 |
extraembryonic mesoderm | 4.85e-45 | 10 |
blood | 2.01e-30 | 15 |
haemolymphatic fluid | 2.01e-30 | 15 |
organism substance | 2.01e-30 | 15 |
extraembryonic structure | 2.00e-19 | 24 |
hematopoietic system | 7.68e-09 | 98 |
blood island | 7.68e-09 | 98 |
hemolymphoid system | 4.22e-08 | 108 |