FFCP PHASE1:Hg19::chr12:71314392..71314444,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9680 | |||
|TSSclassifier=strong | |||
|UniProt=Q15256 | |||
|association_with_transcript=139bp_to_NM_002849,uc001swi.1_5end | |||
|coexpression_cluster_id=C1164 | |||
|description=CAGE_peak_2_at_PTPRR_5end | |||
|id=chr12:71314392..71314444,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.85e-09;2!CL:0000242;6.85e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.07e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.63e-16;82!UBERON:0006215;1.39e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.91e-88!57;UBERON:0005068!1.91e-88!57;UBERON:0006241!1.91e-88!57;UBERON:0007135!1.91e-88!57;UBERON:0001017!2.23e-74!82;UBERON:0002616!6.61e-74!59;UBERON:0000073!7.14e-74!94;UBERON:0001016!7.14e-74!94;UBERON:0005743!2.58e-73!86;UBERON:0002780!1.54e-67!41;UBERON:0001890!1.54e-67!41;UBERON:0006240!1.54e-67!41;UBERON:0000955!6.06e-67!69;UBERON:0006238!6.06e-67!69;UBERON:0003080!1.01e-65!42;UBERON:0003075!3.75e-65!86;UBERON:0007284!3.75e-65!86;UBERON:0002020!3.34e-64!34;UBERON:0003528!3.34e-64!34;UBERON:0001893!4.38e-64!34;UBERON:0002346!1.15e-61!90;UBERON:0002791!1.17e-61!33;UBERON:0001869!3.05e-60!32;UBERON:0002619!2.19e-56!22;UBERON:0007023!3.33e-52!115;UBERON:0001950!9.38e-52!20;UBERON:0000956!4.59e-49!25;UBERON:0000203!4.59e-49!25;UBERON:0003056!4.38e-45!61;UBERON:0004121!2.02e-41!169;UBERON:0000924!4.02e-40!173;UBERON:0006601!4.02e-40!173;UBERON:0000033!5.03e-36!123;UBERON:0000153!9.15e-34!129;UBERON:0007811!9.15e-34!129;UBERON:0003076!1.41e-22!15;UBERON:0003057!1.41e-22!15;UBERON:0001871!2.28e-20!7;UBERON:0000025!3.67e-20!194;UBERON:0004733!1.72e-16!12;UBERON:0002028!1.72e-16!12;UBERON:0007277!1.72e-16!12;UBERON:0002420!1.78e-16!9;UBERON:0007245!1.78e-16!9;UBERON:0010009!1.78e-16!9;UBERON:0010011!1.78e-16!9;UBERON:0000454!1.78e-16!9;UBERON:0002308!3.17e-16!9;UBERON:0000125!3.17e-16!9;UBERON:0000200!4.65e-16!6;UBERON:0004732!4.50e-15!13;UBERON:0000064!1.54e-14!219;UBERON:0002298!2.16e-14!8;UBERON:0004111!9.58e-14!241;UBERON:0002021!1.46e-13!5;UBERON:0001872!1.79e-13!5;UBERON:0000349!2.44e-13!5;UBERON:0000483!2.60e-13!309;UBERON:0000119!4.77e-13!312;UBERON:0009663!5.71e-12!7;UBERON:0000477!4.98e-11!286;UBERON:0000369!2.33e-10!4;UBERON:0002435!2.33e-10!4;UBERON:0000204!2.33e-10!4;UBERON:0010082!2.33e-10!4;UBERON:0002680!2.42e-10!9;UBERON:0001895!2.42e-10!9;UBERON:0010092!2.42e-10!9;UBERON:0000062!2.99e-09!511;UBERON:0002771!6.13e-09!3;UBERON:0000475!1.01e-08!365;UBERON:0000922!1.13e-08!612;UBERON:0000481!1.24e-08!347;UBERON:0001896!2.07e-08!3;UBERON:0005290!2.07e-08!3;UBERON:0010096!2.07e-08!3;UBERON:0000923!2.12e-08!604;UBERON:0005291!2.12e-08!604;UBERON:0006598!2.12e-08!604;UBERON:0002532!2.12e-08!604;UBERON:0002050!2.34e-08!605;UBERON:0005423!2.34e-08!605;UBERON:0000467!4.06e-08!625;UBERON:0000988!4.28e-08!3;UBERON:0000480!4.47e-08!626;UBERON:0002240!5.09e-08!3;UBERON:0005383!6.83e-08!3;UBERON:0005382!6.83e-08!3;UBERON:0006331!7.91e-08!3;UBERON:0001905!5.94e-07!2;UBERON:0002757!5.94e-07!2;UBERON:0010134!5.94e-07!2;UBERON:0002784!5.94e-07!2;UBERON:0005408!5.94e-07!2;UBERON:0001899!5.94e-07!2;UBERON:0000468!9.13e-07!659;UBERON:0003296!9.83e-07!4;UBERON:0010133!9.83e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.69e-76;22!UBERON:0001950;5.68e-69;20!UBERON:0000956;4.50e-67;25!UBERON:0000203;4.50e-67;25!UBERON:0001869;1.87e-56;32!UBERON:0003528;4.66e-55;34!UBERON:0002020;4.66e-55;34!UBERON:0002791;7.73e-51;32!UBERON:0001893;1.59e-49;34!UBERON:0002780;3.17e-40;41!UBERON:0001890;3.17e-40;41!UBERON:0000073;8.18e-38;53!UBERON:0002616;8.18e-38;53!UBERON:0000955;5.15e-26;68!UBERON:0000200;2.22e-25;6!UBERON:0001017;1.49e-22;75!UBERON:0001871;1.95e-21;6!UBERON:0002021;5.32e-21;5!UBERON:0000349;1.20e-20;5!UBERON:0001016;5.42e-20;83!UBERON:0004733;8.74e-17;12!UBERON:0002028;8.74e-17;12!UBERON:0004732;2.03e-15;13!UBERON:0001872;3.69e-14;5!UBERON:0001870;1.70e-13;3!UBERON:0002680;6.16e-12;9!UBERON:0001895;6.16e-12;9!UBERON:0011216;8.11e-12;132!UBERON:0007023;1.03e-11;114!UBERON:0002298;3.68e-11;6!UBERON:0001905;2.34e-10;2!UBERON:0002757;2.34e-10;2!UBERON:0010134;2.34e-10;2!UBERON:0005408;2.34e-10;2!UBERON:0001899;2.34e-10;2!UBERON:0002771;7.55e-10;2!UBERON:0002702;2.62e-09;2!UBERON:0001876;2.74e-09;2!UBERON:0001954;4.25e-09;2!UBERON:0003022;4.25e-09;2!UBERON:0002421;4.25e-09;2!UBERON:0002600;4.25e-09;2!UBERON:0002148;6.85e-09;2!UBERON:0006331;6.85e-09;2!UBERON:0009662;6.85e-09;2!UBERON:0002108;8.32e-08;4!UBERON:0002037;1.74e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.52e-76,22;UBERON:0001049,2.44e-74,56;UBERON:0005068,2.44e-74,56;UBERON:0006241,2.44e-74,56;UBERON:0007135,2.44e-74,56;UBERON:0000073,4.48e-74,53;UBERON:0002616,4.48e-74,53;UBERON:0001950,5.19e-69,20;UBERON:0000956,4.09e-67,25;UBERON:0000203,4.09e-67,25;UBERON:0003528,7.71e-64,34;UBERON:0002020,7.71e-64,34;UBERON:0000955,3.62e-63,68;UBERON:0006238,3.62e-63,68;UBERON:0001869,1.01e-62,32;UBERON:0001016,3.83e-59,89;UBERON:0001017,7.31e-59,81;UBERON:0001893,8.17e-59,34;UBERON:0002780,8.05e-58,41;UBERON:0001890,8.05e-58,41;UBERON:0003080,8.05e-58,41;UBERON:0006240,8.05e-58,41;UBERON:0002791,3.65e-57,32;UBERON:0003075,8.77e-52,82;UBERON:0007284,8.77e-52,82;UBERON:0002346,4.83e-49,86;UBERON:0010371,1.78e-44,104;UBERON:0003056,2.60e-40,61;UBERON:0007023,2.32e-38,114;UBERON:0004121,1.32e-32,171;UBERON:0000924,1.32e-32,171;UBERON:0006601,1.32e-32,171;UBERON:0010314,1.64e-31,132;UBERON:0011216,9.98e-28,223;UBERON:0000200,3.55e-25,6;UBERON:0001871,2.10e-21,6;UBERON:0002021,4.23e-21,5;UBERON:0000349,9.79e-21,5;UBERON:0003076,5.79e-17,15;UBERON:0003057,5.79e-17,15;UBERON:0004733,1.04e-16,12;UBERON:0002028,1.04e-16,12;UBERON:0007277,1.04e-16,12;UBERON:0000025,1.47e-16,192;UBERON:0004732,2.38e-15,13;UBERON:0001872,3.45e-14,5;UBERON:0001870,1.93e-13,3;UBERON:0002680,6.54e-12,9;UBERON:0001895,6.54e-12,9;UBERON:0010092,6.54e-12,9;UBERON:0004111,9.21e-12,240;UBERON:0002298,4.51e-11,6;UBERON:0001905,2.39e-10,2;UBERON:0002757,2.39e-10,2;UBERON:0010134,2.39e-10,2;UBERON:0005408,2.39e-10,2;UBERON:0001899,2.39e-10,2;UBERON:0000483,6.70e-10,306;UBERON:0002771,7.56e-10,2;UBERON:0000119,9.97e-10,309;UBERON:0001876,2.52e-09,2;UBERON:0002702,2.98e-09,2;UBERON:0001954,4.17e-09,2;UBERON:0003022,4.17e-09,2;UBERON:0002421,4.17e-09,2;UBERON:0002600,4.17e-09,2;UBERON:0002148,7.75e-09,2;UBERON:0006331,7.75e-09,2;UBERON:0009662,7.75e-09,2;UBERON:0002108,7.75e-08,4;UBERON:0002037,1.72e-07,6;UBERON:0006215,1.72e-07,6;UBERON:0000923,1.78e-07,560;UBERON:0010316,1.78e-07,560;UBERON:0005291,1.78e-07,560;UBERON:0006598,1.78e-07,560;UBERON:0010317,1.78e-07,560;UBERON:0002532,1.78e-07,560;UBERON:0002050,2.35e-07,564;UBERON:0000922,3.25e-07,592;UBERON:0005423,7.36e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,3.09472716103128,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,3.87733098438087,1.85536196323703,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.60298219312704,33.5679819897583,58.4964285036178,22.1660714215161,2.85201016300164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,2.4441205797345,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0,1.20990716048664,0.91821828489147,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,5.0648636764703,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,1.63444087333891,0,0,0,0,0,7.41144591227901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,1.3223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,2.65820453990096,4.27091927156871,2.3786276834235,0.573409195690071,3.10601344303186,2.54595252059672,0,0,0,0,0,1.40500471742064,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.594719339945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,3.45039396469382,0,28.1760866535396,0,0,0,0,0,0,0,0,0,3.78952428069111,2.8339315265117,2.71377560397157,3.89721092057435,1.26035848110859,4.49522141017416,4.68279372332368,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,3.03919130782776,3.90539049306924,3.51367554052013,3.29762213008315,0.546974809018219,0,0,0,0,33.2135138244538,71.9647165548283,0,0.455324382702595,0,0,0,0.611727596791485,3.28863867814245,0,0,0,0.628462359664008,0,6.39211104356647,0,0,1.1436247068265,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,1.74847648403166,0,0,0,1.37415926980462,0.594092800654172,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,4.6234213329822,1.30905207102113,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p2@PTPRR | |||
}} |
Revision as of 14:40, 11 January 2014
Short description: | p2@PTPRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTPRR_5end |
Coexpression cluster: | C1164_pineal_cerebellum_neuroblastoma_insula_rectum_frontal_olfactory |
Association with transcript: | 139bp_to_NM_002849, uc001swi.1_5end |
EntrezGene: | PTPRR |
HGNC: | 9680 |
UniProt: | Q15256 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.07e-09 | 2 |