FFCP PHASE1:Hg19::chr12:122388174..122388213,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C592 | |||
|description=CAGE_peak_at_chr12:122388174..122388213,+ | |||
|id=chr12:122388174..122388213,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.09e-16!254;CL:0000548!6.34e-16!679;CL:0000004!6.34e-16!679;CL:0000255!6.34e-16!679;CL:0000012!2.03e-15!682;CL:0000220!2.88e-14!246;CL:0002321!7.95e-14!248;CL:0002076!2.68e-13!43;CL:0000055!4.07e-13!180;CL:0000057!9.70e-11!75;CL:0000223!1.16e-10!59;CL:0000144!1.09e-09!625;CL:0000003!2.80e-09!722;CL:0000076!1.56e-08!62;CL:0002251!2.04e-08!21;CL:0002159!9.84e-08!13;CL:0000077!2.59e-07!19;CL:0002371!3.01e-07!591;CL:0000063!4.86e-07!578;CL:0002368!5.66e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.28e-12;42!CL:0002159;1.04e-10;14!CL:0002251;1.55e-10;20!CL:0002368;1.72e-09;13!CL:0000154;1.24e-07;6!CL:0000622;3.82e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.23e-17,253;CL:0002076,1.51e-15,42;CL:0000076,1.84e-13,63;CL:0000223,3.08e-11,58;CL:0002159,1.01e-10,14;CL:0002251,1.38e-10,20;CL:0002321,8.98e-10,250;CL:0002368,1.79e-09,13;CL:0000154,9.66e-08,6;CL:0000622,3.58e-07,5;CL:0000077,6.07e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!6.77e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.81e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.65e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.71e-17!95;UBERON:0004119!6.89e-14!169;UBERON:0000925!6.89e-14!169;UBERON:0006595!6.89e-14!169;UBERON:0001444!3.33e-12!48;UBERON:0000475!2.16e-10!365;UBERON:0000165!9.58e-10!28;UBERON:0000930!9.58e-10!28;UBERON:0000914!1.24e-09!83;UBERON:0002329!1.24e-09!83;UBERON:0003077!1.24e-09!83;UBERON:0003059!1.24e-09!83;UBERON:0007282!1.24e-09!83;UBERON:0009618!1.24e-09!83;UBERON:0007285!1.24e-09!83;UBERON:0001004!4.18e-09!72;UBERON:0001007!9.17e-09!155;UBERON:0001555!9.17e-09!155;UBERON:0007026!9.17e-09!155;UBERON:0000481!1.15e-08!347;UBERON:0003104!1.16e-08!238;UBERON:0009142!1.16e-08!238;UBERON:0005256!1.64e-08!143;UBERON:0000486!2.21e-08!82;UBERON:0005911!4.66e-08!82;UBERON:0002097!1.13e-07!40;UBERON:0000161!1.17e-07!35;UBERON:0000075!3.81e-07!13;UBERON:0005944!3.81e-07!13;UBERON:0004288!3.81e-07!13;UBERON:0003089!3.81e-07!13;UBERON:0002100!7.23e-07!216;UBERON:0000166!7.98e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0003729;7.56e-09;13!UBERON:0000165;9.90e-09;28!UBERON:0000075;3.69e-08;16!UBERON:0001444;1.53e-07;48!UBERON:0000161;1.60e-07;19!UBERON:0000166;1.60e-07;19!UBERON:0000033;1.77e-07;50!UBERON:0010371;3.51e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.60e-16,99;UBERON:0004119,1.15e-13,160;UBERON:0000925,1.15e-13,160;UBERON:0006595,1.15e-13,160;UBERON:0000033,2.16e-12,56;UBERON:0000153,2.82e-10,62;UBERON:0007811,2.82e-10,62;UBERON:0001444,1.06e-09,49;UBERON:0000165,1.75e-09,29;UBERON:0000930,1.75e-09,29;UBERON:0003729,6.47e-09,13;UBERON:0000075,4.50e-08,16;UBERON:0005911,5.54e-08,82;UBERON:0001004,9.41e-08,74;UBERON:0001007,9.51e-08,145;UBERON:0001555,9.51e-08,145;UBERON:0007026,9.51e-08,145;UBERON:0000166,2.89e-07,22 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,3.9319446983431,2.11013582582763,10.8914390604841,8.61633176892581,1.34465029290355,0,2.19093027116212,0.487932798790507,0.738726348460727,0.612002073732759,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0.154816123316076,29.4214791833257,38.8555635223943,28.8408127930094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.2786256184353,0,0,0,0,0,0.945348171640679,0,1.05401742831751,0.0654895377488563,39.7081864238871,50.7974686614668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.045499266396,2.48485975847659,3.29239330327907,20.3910138452357,1.72101972449288,1.06400514659507,3.92474320099615,0,1.97334038733728,0.933633106199299,0.134710672069688,0.326923806226917,0.454072282934794,0,1.40592859100278,0,3.4228309292667,0.298897361103602,0.939475989150119,0.323745888736263,1.40450806702248,0.61246251376468,0.859840221182376,0.206651562351531,2.37600571456411,2.96720315134268,0,0.718618141816238,2.35670559535693,1.00094815897571,1.6623846929051,0.877955241761676,3.37136575378922,0.901428353439581,0.794025282120147,1.25572744982203,1.2813443329114,0.211931901159562,1.20036438433761,1.03052529238439,0.257640540045629,0,0,0,0.252433774244115,0.644349290496095,0.646584227275248,2.13005755509969,1.81353776809752,0.339121184620975,46.5758656123545,151.101350807322,39.8658387590715,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,1.44375896333917,0.236613600079688,0.337169380156203,0,0.110293972732394,0.653638332277218,0,0.404493924480493,0.784885860501384,0.38474715694639,0,0,1.6462960453256,1.47008711385542,0,0,0,0,0.245976877086227,0.343135620597051,42.1441095969122,47.2087363682002,29.2539309717846,71.848633443019,3.25808305310325,0,0,0.115930404975077,2.23076519048061,0.144366447761074,0,0,0,0,0,0,0,35.6188569149753,119.099328892991,106.473098029032,7.6124744297421,9.30028603244678,19.5525166374258,0,0,0,0,0,0.126995788584338,0.763976851116555,0,0,0.411309970813294,0.600686115687835,0,0.560655421726804,1.30788020649984,0.51336800074665,3.10252117818667,0,0,0.531876233169741,0,0,2.83698264046557,0.266422179016099,26.8798628077317,0.542621605391443,0.823240336780769,0.325736184293735,18.8357732833549,1.58390374586686,2.71295439353627,1.74306691720059,1.3996218765488,0,0,0,0.958499421966331,0,0,1.01346914667305,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,0,1.08506009479894,0,0.356857977594324,0.473107245101804,0.117141414992713,0.902838299183157,0,0,2.65690239414175,1.10621501125022,3.38846096425523,0.587403472388222,0.343143423810856,0,0,0,2.12189300012382,3.32870879020994,6.95497674658265,0,0.153461973288062,0,0.256278298511402,0,0.482561763430822,0,1.07946785661859,0,0.492762936082855,4.15403543346897,1.16210378459959,0.120859449591622,41.9058522933865,9.48434186039732,0.574072240823034,2.54927635209404,1.18011973463482,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.512900250232778,4.59220503979588,2.27764876265012,0,0.366277859273374,0,229.131949660473,104.009639365843,1.6068392984416,0.386682873168488,0,0,0.827019434907183,0.859361958946189,0.290033387828457,0.170453254832202,0.267096106940212,27.9331506960053,8.07198282933446,66.7414486346675,4.2486267959331,2.78907329578371,8.49993336442728,5.5762981612848,0,0,1.73986598415015,0.18532421910392,0,1.116475108079,6.32758849437452,4.00323407240032,5.62975140884935,0.855877976067841,0,0,2.69808686374972,1.37268514868027,1.53156123049392,1.2130948894399,0,0,0,0,0,0.9554993798559,0.707027159768564,1.13008116620243,0,1.99031692572366,1.31535265576129,0,0.655894752046633,1.42037263873893,2.16876448669825,0.281695602532241,3.15504974848913,2.45622602532803,0.7133421029625,0.709522128141196,0.422215270595328,0,0.379473173765715,0.349934720244983,48.7846111518346,45.5805547364335,59.8900416737274,0,27.9828492236299,16.8471475667626,14.6331950667103,27.3370846246282,0,0,0,0,0,0,0,0,0.213648142254946,0,17.8879357666153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.890894042497916,0,0,0,11.4647966173593,0,0,0.19924798825107,0,0,16.5675265653491,0,2.48831670129446,1.16828856491525,0.895105873378046,0,0,0,2.22273980289274,0,0,0,0,0,0,6.94140034541548,0,0,0,0,0,0,0,0,0,0,0,0,7.80772967960178,0.230850775511391,1.02547850262301,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0.421996129056054,1.46909527343233,0,0,0,0,0,0,0,0,0,0,0,0,5.86993856796269,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0.173559738335131,6.27151343452017,14.0165322594448,0,0.51595809741485,0,0,0,0,0,0.451961481561065,5.48167698587004,0.596143835108969,0,0.977756913674015,1.84365286578528,1.06726497369676,0,0,0,0,0,8.32491988288398,33.9399409848185,0.135904206073614,0.418411385249333,0.305994652908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| |||
|short_description=p@chr12:122388174..122388213,+ | |||
}} |
Revision as of 16:25, 11 January 2014
Short description: | p@chr12:122388174..122388213, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122388174..122388213, + |
Coexpression cluster: | C592_Sebocyte_Small_Keratinocyte_Gingival_Mallassezderived_oral_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.23e-17 | 253 |
endo-epithelial cell | 1.51e-15 | 42 |
squamous epithelial cell | 1.84e-13 | 63 |
endodermal cell | 3.08e-11 | 58 |
general ecto-epithelial cell | 1.01e-10 | 14 |
epithelial cell of alimentary canal | 1.38e-10 | 20 |
embryonic cell | 8.98e-10 | 250 |
respiratory epithelial cell | 1.79e-09 | 13 |
protein secreting cell | 9.66e-08 | 6 |
acinar cell | 3.58e-07 | 5 |
mesothelial cell | 6.07e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.60e-16 | 99 |
endoderm-derived structure | 1.15e-13 | 160 |
endoderm | 1.15e-13 | 160 |
presumptive endoderm | 1.15e-13 | 160 |
head | 2.16e-12 | 56 |
anterior region of body | 2.82e-10 | 62 |
craniocervical region | 2.82e-10 | 62 |
subdivision of head | 1.06e-09 | 49 |
mouth | 1.75e-09 | 29 |
stomodeum | 1.75e-09 | 29 |
mouth mucosa | 6.47e-09 | 13 |
subdivision of skeletal system | 4.50e-08 | 16 |
endo-epithelium | 5.54e-08 | 82 |
respiratory system | 9.41e-08 | 74 |
digestive system | 9.51e-08 | 145 |
digestive tract | 9.51e-08 | 145 |
primitive gut | 9.51e-08 | 145 |
oral opening | 2.89e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.65e-12 | 14 |