FFCP PHASE1:Hg19::chr13:32605534..32605545,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10129 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20367 | |||
|TSSclassifier=strong | |||
|UniProt=F8WC26,Q5TBA9,F8W6Q0 | |||
|association_with_transcript=97bp_to_ENST00000380235,ENST00000380250,ENST00000380257,NM_023037,uc001utx.2,uc010tdw.1_5end | |||
|description=CAGE_peak_11_at_FRY_5end | |||
|id=chr13:32605534..32605545,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000487;4.85e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,5.90e-09,108;CL:0000049,5.90e-09,108;CL:0000766,6.65e-08,72;CL:1000487,3.77e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.46e-21!115;UBERON:0001049!3.23e-17!57;UBERON:0005068!3.23e-17!57;UBERON:0006241!3.23e-17!57;UBERON:0007135!3.23e-17!57;UBERON:0002780!2.01e-16!41;UBERON:0001890!2.01e-16!41;UBERON:0006240!2.01e-16!41;UBERON:0003080!1.09e-15!42;UBERON:0001893!4.88e-14!34;UBERON:0002616!1.02e-13!59;UBERON:0001869!1.44e-13!32;UBERON:0002020!1.55e-13!34;UBERON:0003528!1.55e-13!34;UBERON:0002791!2.39e-13!33;UBERON:0001017!4.92e-13!82;UBERON:0005743!5.01e-13!86;UBERON:0002619!1.14e-12!22;UBERON:0000073!4.58e-12!94;UBERON:0001016!4.58e-12!94;UBERON:0000955!4.93e-12!69;UBERON:0006238!4.93e-12!69;UBERON:0003075!6.50e-12!86;UBERON:0007284!6.50e-12!86;UBERON:0001950!1.57e-11!20;UBERON:0002346!1.44e-10!90;UBERON:0000956!3.51e-10!25;UBERON:0000203!3.51e-10!25;UBERON:0003056!1.53e-09!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.07e-15;32!UBERON:0002791;8.32e-14;32!UBERON:0001893;1.75e-13;34!UBERON:0001950;6.69e-12;20!UBERON:0003528;1.28e-11;34!UBERON:0002020;1.28e-11;34!UBERON:0002780;4.36e-11;41!UBERON:0001890;4.36e-11;41!UBERON:0002619;1.09e-10;22!UBERON:0000956;3.15e-09;25!UBERON:0000203;3.15e-09;25!UBERON:0000369;1.50e-07;4!UBERON:0002435;1.50e-07;4!UBERON:0000204;1.50e-07;4!UBERON:0009663;2.54e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.19e-16,32;UBERON:0001893,1.73e-15,34;UBERON:0002791,2.20e-14,32;UBERON:0002780,3.62e-14,41;UBERON:0001890,3.62e-14,41;UBERON:0003080,3.62e-14,41;UBERON:0006240,3.62e-14,41;UBERON:0003528,2.27e-13,34;UBERON:0002020,2.27e-13,34;UBERON:0001950,6.86e-12,20;UBERON:0001049,7.16e-11,56;UBERON:0005068,7.16e-11,56;UBERON:0006241,7.16e-11,56;UBERON:0007135,7.16e-11,56;UBERON:0002619,1.11e-10,22;UBERON:0000073,3.66e-10,53;UBERON:0002616,3.66e-10,53;UBERON:0000956,3.21e-09,25;UBERON:0000203,3.21e-09,25;UBERON:0003056,2.24e-08,61;UBERON:0001017,3.63e-08,81;UBERON:0000955,4.20e-08,68;UBERON:0006238,4.20e-08,68;UBERON:0000369,1.05e-07,4;UBERON:0002435,1.05e-07,4;UBERON:0000204,1.05e-07,4;UBERON:0010082,1.05e-07,4;UBERON:0009663,1.91e-07,7;UBERON:0003075,3.66e-07,82;UBERON:0007284,3.66e-07,82;UBERON:0001016,5.98e-07,89 | |||
|phase1_expression=0,0,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0,0,0,0,0.0774672005803016,0.426507697462265,0.293600439334847,1.66198622559563,0,0,0,0,0,0.872389432677388,0.377875943688809,1.94067248950253,1.16214518452842,0.822335776043652,2.16794459626573,0.28769239232215,0.256160706529101,1.41889337933151,0.689491361473237,0,0,0.752969358170419,1.36453075028923,0.674170453335254,0.306083892370903,0.641858054152187,0.639337125799041,0,0.797854630486527,0,0.580418477257168,0,2.4912889959823,0.251248665256743,0,0.217188844705117,0,0,0.949387162322653,0,0,0,0.22465726229299,0.150176892841506,0.48217676009124,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,3.96513985737078,1.12101712596307,0,0.196709770113833,0,0,0,0,0,0,0.334231370655521,0,0,0,0,0.650296737799391,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.289693037921647,0.795285947051099,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.523916301990851,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0.528290604079356,1.4512968087854,1.72943944100354,1.13618190083742,0,0,0,0,0,0,0,0,0.43596006883328,0,1.16344544182,0,0,2.6593811658487,3.12022310734098,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0,2.10833939483032,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0,0,0,1.30139853857622,0,0.335032530668698,0,2.24702107184155,0,2.90090859405225,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.521301686808497,0,0,0,0,0.213455115606889,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0.511707249066704,0.64341568457443,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0.803701137152247,0.546273504020151,1.04899531967539,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.712256285173899,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,2.15846949099978,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,2.32049849393576,1.55545975149084,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.392996164052485,0,1.06428319221179,0.211107635297664,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,1.13929437434833,0,0,0,0.540031437238115,0,0,0,0.490080431962063,0,0,0.284567373393656,0.159426272728822,0,0.383010740264733,0.635020748171649,0,1.12318871245384,0,0.47003968731907,0,0,2.72999727676289,2.82519590067467,4.68430861459359,0.343505344755765,4.91585222893533,3.57881772627865,3.17013369252626,0.19538809540204,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0,0,0.994147647766298,0.562677665642051,0,0,0.211125408127993,1.39473591775749,0,0.251932747854276,0.20453736500431,0,0.311039587661807,0,0,1.53471711068062,0.493217028184668,2.3948309234694,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0,0,0,0,2.05013945663194,0,0.110579259931225,0.591095237907095,0.658156191461918,0,0.697118721393016,0.538651809526579,0,0,0,0.108647371922008,0,0.549585560411174,0,0,0.31396051279005,0.498635045700469,0,0,0,0,0.476809736941136,0,0,0.848118428603645,0,0,0.176915129006678,0,0.889563386041866,0.86494757262552,1.35748534357092,0.539209063845416,0.802577647298789,0.468528891450678,0.547364367646998,0,0,0.789168805698781,1.20990716048664,0,0.442306057399416,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0,0,1.83601308272048,0.195551382734803,0.0801588202515337,0.213452994739353,0.599428828746391,0,0,0.343189995723929,0,0,0,0,0,2.03996435272644,0,2.40168115483916,0.684526894459965,2.55493176133945,0,0.262887354279314,1.39641200636127,0.229160424011684,0,0.199679000498991,0.429226048136571,0.223171457441873,0.806201669840715,0,0,0.551482276150566,0.412079291905832,0.471824806979294,0.0984274815147488,0,0.795229689809303,0.817220436669454,0,0.137539436597234,0,0,0,2.55148137963704,0.335434687599266,0.394028536495991,1.10154635083496,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0.979762080328227,0,0.246277562248017,0,0.339936274560377,0.146552233678082,0,0.258565912723101,0.52893040697076,0,0,0,2.04365596629566,0,0,0,0,0,0,0.2506898940227,0,0,0.471162288750703,0.886068179966986,0.488105059607853,0.625954653532499,0.573409195690071,0.221858103073705,0.807253238237985,0,0,0,0,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| |||
|short_description=p11@FRY | |||
}} |
Revision as of 17:14, 11 January 2014
Short description: | p11@FRY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FRY_5end |
Coexpression cluster: | NA |
Association with transcript: | 97bp_to_ENST00000380235, ENST00000380250, ENST00000380257, NM_023037, uc001utx.2, uc010tdw.1_5end |
EntrezGene: | FRY |
HGNC: | 20367 |
UniProt: | F8WC26Q5TBA9F8W6Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.90e-09 | 108 |
common myeloid progenitor | 5.90e-09 | 108 |
myeloid leukocyte | 6.65e-08 | 72 |
smooth muscle cell of prostate | 3.77e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 1.19e-16 | 32 |
telencephalon | 1.73e-15 | 34 |
regional part of telencephalon | 2.20e-14 | 32 |
regional part of forebrain | 3.62e-14 | 41 |
forebrain | 3.62e-14 | 41 |
anterior neural tube | 3.62e-14 | 41 |
future forebrain | 3.62e-14 | 41 |
brain grey matter | 2.27e-13 | 34 |
gray matter | 2.27e-13 | 34 |
neocortex | 6.86e-12 | 20 |
neural tube | 7.16e-11 | 56 |
neural rod | 7.16e-11 | 56 |
future spinal cord | 7.16e-11 | 56 |
neural keel | 7.16e-11 | 56 |
regional part of cerebral cortex | 1.11e-10 | 22 |
regional part of nervous system | 3.66e-10 | 53 |
regional part of brain | 3.66e-10 | 53 |
cerebral cortex | 3.21e-09 | 25 |
pallium | 3.21e-09 | 25 |
pre-chordal neural plate | 2.24e-08 | 61 |
central nervous system | 3.63e-08 | 81 |
brain | 4.20e-08 | 68 |
future brain | 4.20e-08 | 68 |
corpus striatum | 1.05e-07 | 4 |
striatum | 1.05e-07 | 4 |
ventral part of telencephalon | 1.05e-07 | 4 |
future corpus striatum | 1.05e-07 | 4 |
telencephalic nucleus | 1.91e-07 | 7 |
neural plate | 3.66e-07 | 82 |
presumptive neural plate | 3.66e-07 | 82 |
nervous system | 5.98e-07 | 89 |