FFCP PHASE1:Hg19::chr15:45422178..45422201,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53905 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3062 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NRD9 | |||
|association_with_transcript=0bp_to_ENST00000389037,NM_017434,NM_175940,uc001zus.1,uc001zut.1,uc010bee.1_5end | |||
|coexpression_cluster_id=C2335 | |||
|description=CAGE_peak_1_at_DUOX1_5end | |||
|id=chr15:45422178..45422201,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.49e-09!43;CL:0002368!1.33e-08!13;CL:0002159!3.67e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.86e-13;42!CL:0002368;6.35e-12;13!CL:0002159;8.65e-11;14!CL:0002251;9.44e-10;20!CL:0000622;6.30e-09;5!CL:0000244;4.97e-08;4!CL:0000731;4.97e-08;4!CL:0000154;2.48e-07;6!CL:0000840;3.85e-07;5!CL:0002202;8.58e-07;9!CL:0002632;8.58e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.55e-17,42;CL:0002368,6.20e-12,13;CL:0000223,1.74e-11,58;CL:0002159,8.56e-11,14;CL:0000066,5.50e-10,253;CL:0002251,9.95e-10,20;CL:0000622,6.41e-09,5;CL:0000244,5.06e-08,4;CL:0000731,5.06e-08,4;CL:0000154,2.51e-07,6;CL:0000840,3.90e-07,5;CL:0001029,3.90e-07,5;CL:0002202,8.45e-07,9;CL:0002632,8.45e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;1.56e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.57e-07,14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;4.87e-13;28!UBERON:0000161;3.80e-12;19!UBERON:0000166;3.80e-12;19!UBERON:0001044;9.01e-10;6!UBERON:0003293;9.01e-10;6!UBERON:0003294;9.01e-10;6!UBERON:0010047;9.01e-10;6!UBERON:0003408;9.01e-10;6!UBERON:0000167;9.01e-10;6!UBERON:0000365;5.61e-09;5!UBERON:0001041;2.50e-08;14!UBERON:0000486;2.71e-08;12!UBERON:0005910;2.25e-07;6!UBERON:0005178;4.63e-07;34!UBERON:0002224;4.63e-07;34!UBERON:0000974;4.78e-07;6!UBERON:0007811;5.78e-07;52!UBERON:0001004;8.18e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.55e-19,160;UBERON:0000925,4.55e-19,160;UBERON:0006595,4.55e-19,160;UBERON:0000161,1.39e-14,36;UBERON:0001004,1.76e-14,74;UBERON:0000166,5.99e-14,22;UBERON:0003102,6.22e-13,99;UBERON:0000165,2.09e-12,29;UBERON:0000930,2.09e-12,29;UBERON:0001007,1.84e-11,145;UBERON:0001555,1.84e-11,145;UBERON:0007026,1.84e-11,145;UBERON:0000153,5.11e-11,62;UBERON:0007811,5.11e-11,62;UBERON:0000033,1.91e-10,56;UBERON:0001044,9.23e-10,6;UBERON:0003293,9.23e-10,6;UBERON:0003294,9.23e-10,6;UBERON:0010047,9.23e-10,6;UBERON:0000167,9.23e-10,6;UBERON:0001444,2.76e-09,49;UBERON:0005631,3.00e-09,14;UBERON:0000158,3.00e-09,14;UBERON:0000365,5.90e-09,5;UBERON:0000065,2.41e-08,54;UBERON:0005178,6.34e-08,34;UBERON:0002224,6.34e-08,34;UBERON:0005181,1.38e-07,35;UBERON:0005910,2.35e-07,6;UBERON:0004921,3.74e-07,118 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.737201809504527,2.79120467188971,2.62129646556207,2.90143676051299,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,30.3409004078046,31.0242096341598,30.6895828438434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,6.15601654839249,42.6225487302274,39.3031509351495,25.9637914923747,21.9403468997077,10.3707209204715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.9478505699593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0.570471821544449,0,0.23486899728753,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0.277064115484183,1.75591048352335,0.919463387397059,0.600952235626387,0,1.4351170855109,0.213557388818567,0,0,0,1.03056216018252,0.18611685633159,3.71307930930786,0.194874010322397,0,0,0.80823028409406,0,0.10075209822764,0.339121184620975,23.5778240859222,30.2748193855826,18.0686895095072,0.609868530647977,0,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6080821976842,32.5965084447097,17.1904542823889,13.0549707673527,0,0,0,0,0,0,0,0,0,0,0,0,0,6.56136837907439,29.2288903066016,18.714312835995,11.4634909059646,9.00965209393282,18.0189859207649,0,0,0.414656231081544,0.864719720501769,0.6312121671319,0.253991577168676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.60818530127658,0,0,0,0,0,11.2157201435116,6.65741758041988,8.76931850656073,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,19.8501405600252,15.2854441633588,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,15.971356805397,0,0,21.2478249058584,16.251506150913,0,0,0,0,0,0.107420244868274,0,0,0,17.6854859436247,13.6454947829225,52.5764375477687,13.0493537303659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,18.6670898687493,25.4714864703599,33.75620530701,16.0044461320525,36.5929566770545,62.3344459970215,62.967081802208,19.5264890175916,0,0,0,0,0,0,0,0,0,0,8.08632712737405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,35.0954392564404,8.31501106331388,28.5659452952286,0,0.422008249231538,1.44701316529778,0,0,5.97743964753209,0.552567831062295,0,0,0,0.311039587661807,0,0,0,4.63624006493588,0,0,0,0.278304294485554,0,0,0,0,9.90003000083847,0,0,0.344743373241465,0,2.77799991893268,0,0.482385754501632,0,0,0.295547618953547,0.219385397153973,0,48.9377342417898,12.6198423946227,0,0,0.179515288819544,0,8.93203247249374,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.619202951523374,0,0,0,0,2.49384192028505,0,0.234264445725339,0,5.47860933009851,0,74.5764521385348,0,0,2.21153028699708,0,0,0,0,0,0,0,0,0,23.5181753794506,0,65.6972272590033,0,0,0,0,65.9525312121252,0,2.25980740780532,0.137041924646751,0,0.189932387867636,5.27988733383968,0,10.6726497369676,0,0,0,0,0,8.57342495401485,15.7915003193253,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0.458320848023367,0.717873024576814,0.798716001995964,0,0.669514372325618,0.268733889946905,0,0,0,0,0,0,0,0,0.681017030557878,0.160753148465019,0.137539436597234,0,6.07429507189051,88.9872247741642,0.364497339948148,64.7388947066584,0.157611414598396,0.472091293214983,0,0,5.9493711169028,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,111.379271308106,17.9212907813619,95.6892217852022,0,0,0,24.8953090530371,1.08803560673895,0,0.306345576763462,0.655745261419609,0,0,0.244052529803926,0.3755727921195,0,0.554645257684261,0.931446044120752,0.830091809617385,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,1.50257608997218,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,2.47041157728778,0,5.47736352432231,0,0,0,0,0,0.414775308455192,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,22.3807212351111,17.4181632809232,0.639471856518258,0,0,0.109209638192014,1.86705782949428,0,0.867550349813015,0,0,0,0,0,0,0.706521476061055,0,0.159633859057151,0,0,0.345786262321089,0.807378228159255,1.42769420259154,30.2294972983159,0,11.7394303053875,1.27078232765372,0.381382095467167,0,0,1.50420656698514,0,0,0,0,2.06998520703863,0.472763092328763,0,0.206686796501184,0.570742291745161,0,7.67560873600055,11.4128571029538,5.27613733078862,15.459253744391,0,0.672567444437648,0.606965604236632,1.36597314810779,3.99160665731875,0,0,0.135939465953663,0.263091094251396,0.590969204419841,0,7.92780237790192,0,0,0,0,0,6.64731860842904,0,0,0,0,7.8742142381954,40.1188421170782,76.0385627995501,19.7904585057328,0,0.0852134047591577,31.3306417141287,0,0,0,0,0,0.731507549893617,0.647428837187895,0.102662806856247,0,8.25708688200537,0,0,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| |||
|short_description=p1@DUOX1 | |||
}} |
Revision as of 23:18, 11 January 2014
Short description: | p1@DUOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DUOX1_5end |
Coexpression cluster: | C2335_lung_immature_thyroid_salivary_esophagus_ductus_tongue |
Association with transcript: | 0bp_to_ENST00000389037, NM_017434, NM_175940, uc001zus.1, uc001zut.1, uc010bee.1_5end |
EntrezGene: | DUOX1 |
HGNC: | 3062 |
UniProt: | Q9NRD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.55e-17 | 42 |
respiratory epithelial cell | 6.20e-12 | 13 |
endodermal cell | 1.74e-11 | 58 |
general ecto-epithelial cell | 8.56e-11 | 14 |
epithelial cell | 5.50e-10 | 253 |
epithelial cell of alimentary canal | 9.95e-10 | 20 |
acinar cell | 6.41e-09 | 5 |
transitional epithelial cell | 5.06e-08 | 4 |
urothelial cell | 5.06e-08 | 4 |
protein secreting cell | 2.51e-07 | 6 |
immature conventional dendritic cell | 3.90e-07 | 5 |
common dendritic progenitor | 3.90e-07 | 5 |
epithelial cell of tracheobronchial tree | 8.45e-07 | 9 |
epithelial cell of lower respiratory tract | 8.45e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.55e-19 | 160 |
endoderm | 4.55e-19 | 160 |
presumptive endoderm | 4.55e-19 | 160 |
orifice | 1.39e-14 | 36 |
respiratory system | 1.76e-14 | 74 |
oral opening | 5.99e-14 | 22 |
surface structure | 6.22e-13 | 99 |
mouth | 2.09e-12 | 29 |
stomodeum | 2.09e-12 | 29 |
digestive system | 1.84e-11 | 145 |
digestive tract | 1.84e-11 | 145 |
primitive gut | 1.84e-11 | 145 |
anterior region of body | 5.11e-11 | 62 |
craniocervical region | 5.11e-11 | 62 |
head | 1.91e-10 | 56 |
saliva-secreting gland | 9.23e-10 | 6 |
gland of oral region | 9.23e-10 | 6 |
gland of foregut | 9.23e-10 | 6 |
oral gland | 9.23e-10 | 6 |
oral cavity | 9.23e-10 | 6 |
subdivision of head | 2.76e-09 | 49 |
extraembryonic membrane | 3.00e-09 | 14 |
membranous layer | 3.00e-09 | 14 |
urothelium | 5.90e-09 | 5 |
respiratory tract | 2.41e-08 | 54 |
thoracic cavity element | 6.34e-08 | 34 |
thoracic cavity | 6.34e-08 | 34 |
thoracic segment organ | 1.38e-07 | 35 |
transitional epithelium | 2.35e-07 | 6 |
subdivision of digestive tract | 3.74e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.57e-07 | 14 |