FFCP PHASE1:Hg19::chr17:425023..425038,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C502 | |||
|description=CAGE_peak_at_chr17:425023..425038,- | |||
|id=chr17:425023..425038,- | |||
|ontology_enrichment_celltype=CL:0002057!2.63e-16!42;CL:0000860!9.34e-15!45;CL:0000766!1.99e-10!76;CL:0002194!2.19e-09!63;CL:0000576!2.19e-09!63;CL:0000040!2.19e-09!63;CL:0000559!2.19e-09!63;CL:0002009!6.60e-09!65;CL:0000839!7.72e-08!70;CL:0000557!1.21e-07!71;CL:0000767!8.96e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-19;33!CL:0002057;1.60e-19;33!CL:0000197;2.29e-15;6!CL:0000098;2.29e-15;6!CL:0002167;2.29e-15;6!CL:0000473;4.58e-15;39!CL:0000234;4.58e-15;39!CL:0000650;5.36e-12;2!CL:1000500;5.36e-12;2!CL:1000618;5.36e-12;2!CL:1001318;5.36e-12;2!CL:0002173;5.36e-12;2!CL:0000576;2.74e-09;48!CL:0000767;1.31e-08;3!CL:0000766;2.04e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.69e-19,42;CL:0002057,8.69e-19,42;CL:0000473,4.13e-16,48;CL:0000234,4.13e-16,48;CL:0000197,2.43e-15,6;CL:0000098,2.43e-15,6;CL:0002167,2.43e-15,6;CL:0000766,2.12e-13,72;CL:0002194,2.29e-12,59;CL:0000576,2.29e-12,59;CL:0000040,2.29e-12,59;CL:0000559,2.29e-12,59;CL:0000650,6.52e-12,2;CL:1000500,6.52e-12,2;CL:1000618,6.52e-12,2;CL:1001318,6.52e-12,2;CL:0002173,6.52e-12,2;CL:0002009,6.94e-12,61;CL:0000839,8.32e-11,66;CL:0000557,1.31e-10,67;CL:0000767,1.17e-08,3;CL:0000763,5.78e-08,108;CL:0000049,5.78e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.81e-16;42 | |||
|ontology_enrichment_disease=DOID:2394!2.73e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.34e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.03e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002619!1.85e-08!22;UBERON:0002390!1.49e-07!102;UBERON:0003061!1.49e-07!102;UBERON:0002193!1.65e-07!112;UBERON:0000956!3.80e-07!25;UBERON:0000203!3.80e-07!25;UBERON:0001871!9.41e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;5.36e-12;2!UBERON:0003838;5.36e-12;2!UBERON:0003586;5.36e-12;2!UBERON:0005169;5.36e-12;2!UBERON:0002321;5.36e-12;2!UBERON:0005215;5.36e-12;2!UBERON:0002303;5.36e-12;2!UBERON:0002319;5.36e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,6.52e-12,2;UBERON:0003838,6.52e-12,2;UBERON:0003586,6.52e-12,2;UBERON:0005169,6.52e-12,2;UBERON:0002321,6.52e-12,2;UBERON:0005215,6.52e-12,2;UBERON:0002303,6.52e-12,2;UBERON:0002319,6.52e-12,2;UBERON:0002371,4.50e-09,76;UBERON:0001474,3.09e-08,82;UBERON:0004765,2.70e-07,90;UBERON:0002405,5.52e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9478425202584,2.68680578668049,0.928896739896456,0,0,0,0,0,0,0,1.20326668482085,0.651032612147555,0,0,0,1.74477886535478,1.88937971844405,0,1.62700325833979,0.411167888021826,0,1.7261543539329,1.0246428261164,0,2.06847408441971,1.29096936716765,0,2.25890807451126,0.272906150057846,0,1.83650335422542,0.320929027076094,0,0.659702600373432,1.39624560335142,0,4.06292934080018,0.56738522469114,0,1.25624332628372,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,0,0,0,0,0,0,0.357198913136319,0.44905874525234,0.337834441449967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0.30648779579902,0,0,1.07633781413317,0.213557388818567,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,2.07970861530807,3.21172179834891,4.41566762095017,2.34282829985426,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.524497659837696,0,0,1.56869953835371,0,0,0,0.510281115829547,0.647747748306418,0,1.35473218771926,3.01013864312912,0,0.831076008928724,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85945290885737,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,2.45699840534374,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36310417428337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,1.43367090447332,0,0.931577741257556,0,0.53168342911599,1.04349012362347,0,2.66563648518157,1.62748293281865,0.727394636810238,0.429642228169954,0,1.99047944349308,0,0,0,0,0,4.07439023612359,0,0,11.113078767544,0.244736704506468,34.5641463287271,0.308801447160972,0,0,0,0,0,0,5.46947921119288,0.276516872303462,0,0,0,0,0,0,0,0,0,2.27006381426734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr17:425023..425038,- | |||
}} |
Revision as of 12:54, 20 January 2014
Short description: | p@chr17:425023..425038, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:425023..425038, - |
Coexpression cluster: | C502_mesothelioma_Basophils_liposarcoma_Olfactory_Fibroblast_mesenchymal_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.69e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.69e-19 | 42 |
defensive cell | 4.13e-16 | 48 |
phagocyte | 4.13e-16 | 48 |
receptor cell | 2.43e-15 | 6 |
sensory epithelial cell | 2.43e-15 | 6 |
olfactory epithelial cell | 2.43e-15 | 6 |
myeloid leukocyte | 2.12e-13 | 72 |
monopoietic cell | 2.29e-12 | 59 |
monocyte | 2.29e-12 | 59 |
monoblast | 2.29e-12 | 59 |
promonocyte | 2.29e-12 | 59 |
mesangial cell | 6.52e-12 | 2 |
kidney interstitial cell | 6.52e-12 | 2 |
juxtaglomerular complex cell | 6.52e-12 | 2 |
renal interstitial pericyte | 6.52e-12 | 2 |
extraglomerular mesangial cell | 6.52e-12 | 2 |
macrophage dendritic cell progenitor | 6.94e-12 | 61 |
myeloid lineage restricted progenitor cell | 8.32e-11 | 66 |
granulocyte monocyte progenitor cell | 1.31e-10 | 67 |
basophil | 1.17e-08 | 3 |
myeloid cell | 5.78e-08 | 108 |
common myeloid progenitor | 5.78e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 6.52e-12 | 2 |
abdominal segment connective tissue | 6.52e-12 | 2 |
trunk connective tissue | 6.52e-12 | 2 |
interstitial tissue | 6.52e-12 | 2 |
extraglomerular mesangium | 6.52e-12 | 2 |
kidney interstitium | 6.52e-12 | 2 |
juxtaglomerular apparatus | 6.52e-12 | 2 |
mesangium | 6.52e-12 | 2 |
bone marrow | 4.50e-09 | 76 |
bone element | 3.09e-08 | 82 |
skeletal element | 2.70e-07 | 90 |
immune system | 5.52e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.03e-09 | 14 |