FFCP PHASE1:Hg19::chr17:39686752..39686759,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:39686752..39686759,+ | |||
|id=chr17:39686752..39686759,+ | |||
|ontology_enrichment_celltype=CL:0002274!9.86e-15!5;CL:0000457!9.86e-15!5;CL:0002191!9.86e-15!5;CL:0000097!9.86e-15!5;CL:0000831!9.86e-15!5;CL:0002028!9.86e-15!5;CL:0002537!1.99e-09!5;CL:0000066!2.74e-09!254;CL:0002231!4.17e-08!3;CL:0000163!5.82e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.04e-28;5!CL:0002591;1.78e-16;1!CL:0000163;5.16e-16;9!CL:0002537;3.23e-13;5!CL:0000349;7.90e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.30e-28,5;CL:0002028,2.30e-28,5;CL:0002591,2.25e-16,1;CL:0000163,4.43e-16,9;CL:0002537,3.43e-13,5;CL:0000349,8.00e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.21e-16;4!DOID:1612;1.21e-16;4!DOID:4929;6.67e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.21e-16,4;DOID:1612,1.21e-16,4;DOID:4929,8.74e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.94e-14!14;UBERON:0000158!1.94e-14!14;UBERON:0000305!7.12e-10!7;UBERON:0004871!1.39e-08!8;UBERON:0000478!1.19e-07!24;UBERON:0006554!3.83e-07!44;UBERON:0003937!6.34e-07!12;UBERON:0005399!6.34e-07!12;UBERON:0001008!6.37e-07!45;UBERON:0000058!8.52e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.78e-16;1!UBERON:0003703;1.78e-16;1!UBERON:0001174;1.78e-16;1!UBERON:0004914;1.78e-16;1!UBERON:0000305;1.04e-09;7!UBERON:0000078;6.67e-09;2!UBERON:0002012;6.67e-09;2!UBERON:0008886;6.67e-09;2!UBERON:0000310;3.33e-07;10!UBERON:0005631;4.66e-07;10!UBERON:0000158;4.66e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,3.07e-16,1;UBERON:0003703,3.07e-16,1;UBERON:0001174,3.07e-16,1;UBERON:0004914,3.07e-16,1;UBERON:0005631,2.03e-10,14;UBERON:0000158,2.03e-10,14;UBERON:0000305,1.09e-09,7;UBERON:0000078,7.49e-09,2;UBERON:0007497,7.49e-09,2;UBERON:0003643,7.49e-09,2;UBERON:0003504,7.49e-09,2;UBERON:0003469,7.49e-09,2;UBERON:0003496,7.49e-09,2;UBERON:0002012,7.49e-09,2;UBERON:0008886,7.49e-09,2;UBERON:0007303,7.49e-09,2;UBERON:0002061,7.49e-09,2;UBERON:0005432,7.49e-09,2;UBERON:0004363,7.49e-09,2;UBERON:0004871,1.37e-08,8;UBERON:0000485,1.05e-07,9;UBERON:0000310,3.33e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53143078571493,5.15091697256924,0,0,0,0,0,0.283550194484773,0,0,0,0.492663237895943,0.616339038092582,4.35389042635621,1.58531948758658,2.77733353538036,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20956117331872,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0.40101294060657,0.0920809889358963,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,1.19372242368845,0.890894042497916,2.76444631889309,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.174118413160805,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0.192914038270915,0.844712203265363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03499260351932,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.196300467230486,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506794004045748,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:39686752..39686759,+ | |||
}} |
Revision as of 15:18, 20 January 2014
Short description: | p@chr17:39686752..39686759, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:39686752..39686759, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.30e-28 | 5 |
basophil mast progenitor cell | 2.30e-28 | 5 |
smooth muscle cell of the pulmonary artery | 2.25e-16 | 1 |
endocrine cell | 4.43e-16 | 9 |
amnion mesenchymal stem cell | 3.43e-13 | 5 |
extraembryonic cell | 8.00e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 3.07e-16 | 1 |
extrahepatic bile duct | 3.07e-16 | 1 |
common bile duct | 3.07e-16 | 1 |
duodenal papilla | 3.07e-16 | 1 |
extraembryonic membrane | 2.03e-10 | 14 |
membranous layer | 2.03e-10 | 14 |
amnion | 1.09e-09 | 7 |
mixed ectoderm/mesoderm/endoderm-derived structure | 7.49e-09 | 2 |
developing epithelial placode | 7.49e-09 | 2 |
respiratory system arterial blood vessel | 7.49e-09 | 2 |
respiratory system blood vessel | 7.49e-09 | 2 |
respiratory system artery | 7.49e-09 | 2 |
head blood vessel | 7.49e-09 | 2 |
pulmonary artery | 7.49e-09 | 2 |
pulmonary vascular system | 7.49e-09 | 2 |
pharyngeal vasculature | 7.49e-09 | 2 |
truncus arteriosus | 7.49e-09 | 2 |
aortic sac | 7.49e-09 | 2 |
pharyngeal arch artery | 7.49e-09 | 2 |
somatic layer of lateral plate mesoderm | 1.37e-08 | 8 |
simple columnar epithelium | 1.05e-07 | 9 |
breast | 3.33e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.21e-16 | 4 |
breast cancer | 1.21e-16 | 4 |
tubular adenocarcinoma | 8.74e-09 | 2 |