FFCP PHASE1:Hg19::chr17:73606957..73607009,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80022 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14083 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK096869_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_5_at_MYO15B_5end | |||
|id=chr17:73606957..73607009,+ | |||
|ontology_enrichment_celltype=CL:0002150!1.06e-07!3;CL:0000861!1.06e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;3.25e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,3.25e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.28e-11;1!UBERON:0001045;4.67e-11;1 | |||
|ontology_enrichment_disease=DOID:305!4.58e-17!106;DOID:0050687!4.17e-12!143;DOID:162!1.21e-07!235;DOID:14566!2.76e-07!239;DOID:299!9.12e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.43e-21;2!DOID:4929;6.05e-21;2!DOID:299;6.78e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.55e-21,2;DOID:4929,5.76e-21,2;DOID:299,6.78e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.49e-17!129;UBERON:0004185!3.49e-17!129;UBERON:0001007!1.22e-15!155;UBERON:0001555!1.22e-15!155;UBERON:0007026!1.22e-15!155;UBERON:0004119!1.80e-13!169;UBERON:0000925!1.80e-13!169;UBERON:0006595!1.80e-13!169;UBERON:0000077!2.17e-11!130;UBERON:0005409!3.10e-11!35;UBERON:0001041!8.16e-11!98;UBERON:0000160!2.63e-09!27;UBERON:0002294!2.98e-09!7;UBERON:0001173!2.98e-09!7;UBERON:0004912!2.98e-09!7;UBERON:0001737!3.85e-09!9;UBERON:0009497!1.09e-07!25;UBERON:0000015!1.09e-07!25;UBERON:0002423!1.09e-07!25;UBERON:0006235!1.09e-07!25;UBERON:0004161!1.09e-07!25;UBERON:0009856!2.59e-07!26;UBERON:0001155!3.25e-07!9;UBERON:0000072!5.52e-07!46;UBERON:0009854!6.80e-07!23;UBERON:0001557!8.86e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.48e-34;17!UBERON:0005409;5.23e-34;22!UBERON:0002108;2.58e-32;4!UBERON:0004921;4.19e-21;33!UBERON:0001155;5.00e-18;9!UBERON:0000059;8.45e-15;11!UBERON:0002114;2.26e-14;2!UBERON:0002294;2.19e-13;7!UBERON:0001173;2.19e-13;7!UBERON:0004913;1.69e-11;1!UBERON:0003703;1.69e-11;1!UBERON:0001174;1.69e-11;1!UBERON:0004914;1.69e-11;1!UBERON:0001154;4.67e-11;1!UBERON:0001153;4.67e-11;1!UBERON:0009854;4.67e-11;1!UBERON:0002394;5.87e-11;4!UBERON:0003928;5.87e-11;4!UBERON:0005631;8.61e-10;10!UBERON:0000158;8.61e-10;10!UBERON:0001555;1.44e-07;54!UBERON:0000305;8.13e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.29e-34,17;UBERON:0002108,2.48e-32,4;UBERON:0005409,5.34e-30,25;UBERON:0001155,4.47e-18,9;UBERON:0000059,7.72e-15,11;UBERON:0002114,2.26e-14,2;UBERON:0004913,1.60e-11,1;UBERON:0003703,1.60e-11,1;UBERON:0001174,1.60e-11,1;UBERON:0004914,1.60e-11,1;UBERON:0001154,4.01e-11,1;UBERON:0001153,4.01e-11,1;UBERON:0001045,4.01e-11,1;UBERON:0002294,1.53e-10,9;UBERON:0001173,1.53e-10,9;UBERON:0004912,1.53e-10,9;UBERON:0004921,1.52e-08,118;UBERON:0001007,4.99e-08,145;UBERON:0001555,4.99e-08,145;UBERON:0007026,4.99e-08,145;UBERON:0002394,1.38e-07,6;UBERON:0003928,1.38e-07,6;UBERON:0005631,3.99e-07,14;UBERON:0000158,3.99e-07,14;UBERON:0004119,4.18e-07,160;UBERON:0000925,4.18e-07,160;UBERON:0006595,4.18e-07,160;UBERON:0000305,8.13e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0,0.220587945464788,0,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0.222886768554957,0,16.4733694469006,0,52.5244800589687,0,0,0,0,0,0,2.76283915531148,0,0,0,0,0.359473404589307,3.40140231883657,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,5.42301971544263,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,4.97630965539252,21.6721033033181,5.49927130440263,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0.774050650312681,0.0730893170861856,0.246346371159628,0.387956065953678,0,0,0,0,0,0,0.240476460754601,3.84215390530835,0,0.432271251462318,0,0,0.14405479798815,0,0,0.951329442515298,0.627617077873999,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,2.52178263357434,0.314727528809989,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,7.01456035325751,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.983091635014877,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.50566779354999,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0.118193840883968,0.222462803784138,0,0.157115589916002,0,0,0.431855182437243,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18346471776031,9.99726984854609,0,0,0,0,0,0,0,0.11294608203896,0,0,75.7078491038937,2.62271472604749,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0.730336388246517,0,0,0,0.0679914901909147,0,4.2322147241232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0.435433495793923,0,0.134704106029175,0.502055437748735,0,0,0,0,3.59300808426348,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@MYO15B | |||
}} |
Revision as of 17:20, 20 January 2014
Short description: | p5@MYO15B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MYO15B_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_AK096869_5end |
EntrezGene: | MYO15B |
HGNC: | 14083 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 3.25e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.29e-34 | 17 |
small intestine | 2.48e-32 | 4 |
gastrointestinal system | 5.34e-30 | 25 |
colon | 4.47e-18 | 9 |
large intestine | 7.72e-15 | 11 |
duodenum | 2.26e-14 | 2 |
hepatopancreatic ampulla | 1.60e-11 | 1 |
extrahepatic bile duct | 1.60e-11 | 1 |
common bile duct | 1.60e-11 | 1 |
duodenal papilla | 1.60e-11 | 1 |
vermiform appendix | 4.01e-11 | 1 |
caecum | 4.01e-11 | 1 |
midgut | 4.01e-11 | 1 |
biliary system | 1.53e-10 | 9 |
biliary tree | 1.53e-10 | 9 |
biliary bud | 1.53e-10 | 9 |
subdivision of digestive tract | 1.52e-08 | 118 |
digestive system | 4.99e-08 | 145 |
digestive tract | 4.99e-08 | 145 |
primitive gut | 4.99e-08 | 145 |
bile duct | 1.38e-07 | 6 |
digestive system duct | 1.38e-07 | 6 |
extraembryonic membrane | 3.99e-07 | 14 |
membranous layer | 3.99e-07 | 14 |
endoderm-derived structure | 4.18e-07 | 160 |
endoderm | 4.18e-07 | 160 |
presumptive endoderm | 4.18e-07 | 160 |
amnion | 8.13e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.55e-21 | 2 |
tubular adenocarcinoma | 5.76e-21 | 2 |
adenocarcinoma | 6.78e-10 | 25 |