FFCP PHASE1:Hg19::chr19:36001433..36001463,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25063 | |||
|TSSclassifier=strong | |||
|UniProt=Q6E0U4 | |||
|association_with_transcript=-21bp_to_ENST00000461300,ENST00000462538,ENST00000480507,NR_033746,uc002nzk.3,uc002nzl.3,uc002nzp.2,uc002nzq.2,uc002nzr.2,uc002nzs.2,uc002nzt.2,uc002nzu.2,uc002nzv.2,uc002nzw.2,uc002nzx.3,uc002nzy.3,uc010xsv.1,uc010xsw.1_5end | |||
|coexpression_cluster_id=C2484 | |||
|description=CAGE_peak_7_at_DMKN_5end | |||
|id=chr19:36001433..36001463,- | |||
|ontology_enrichment_celltype=CL:0000066!9.71e-27!254;CL:0002076!7.20e-12!43;CL:0000223!8.38e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.74e-11;42!CL:0002202;7.67e-07;9!CL:0002632;7.67e-07;9!CL:0002368;8.58e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.53e-36,253;CL:0002076,2.54e-14,42;CL:0000223,1.02e-08,58;CL:0002202,6.75e-07,9;CL:0002632,6.75e-07,9;CL:0000082,8.89e-07,19;CL:0002368,8.96e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.35e-11;29 | |||
|ontology_enrichment_disease=DOID:305!1.10e-18!106;DOID:0050687!1.40e-14!143;DOID:299!1.70e-07!25;DOID:1749!1.75e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;1.39e-10;25!DOID:1749;9.08e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.95e-23,106;DOID:0050687,3.53e-19,143;DOID:162,1.95e-11,235;DOID:14566,1.04e-10,239;DOID:299,1.82e-10,25;DOID:1749,1.38e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.41e-15!169;UBERON:0000925!2.41e-15!169;UBERON:0006595!2.41e-15!169;UBERON:0000064!3.18e-15!219;UBERON:0001004!1.24e-12!72;UBERON:0000464!8.13e-12!104;UBERON:0001007!1.36e-11!155;UBERON:0001555!1.36e-11!155;UBERON:0007026!1.36e-11!155;UBERON:0008947!2.31e-11!38;UBERON:0003258!2.31e-11!38;UBERON:0004921!4.11e-11!129;UBERON:0004185!4.11e-11!129;UBERON:0000077!1.33e-10!130;UBERON:0000065!2.41e-10!53;UBERON:0001041!7.82e-10!98;UBERON:0000466!1.95e-09!126;UBERON:0000062!2.82e-09!511;UBERON:0000072!2.49e-08!46;UBERON:0000481!2.50e-08!347;UBERON:0005177!4.57e-08!107;UBERON:0005157!4.71e-08!51;UBERON:0001048!4.97e-08!168;UBERON:0005153!1.21e-07!37;UBERON:0006554!4.75e-07!44;UBERON:0001737!6.02e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.50e-11;37!UBERON:0000065;3.27e-10;44!UBERON:0001737;7.14e-10;9!UBERON:0001557;7.14e-10;9!UBERON:0005911;4.86e-08;36!UBERON:0005178;2.36e-07;34!UBERON:0002224;2.36e-07;34!UBERON:0004807;2.67e-07;22!UBERON:0001004;4.18e-07;65!UBERON:0002048;5.21e-07;22!UBERON:0000117;5.21e-07;22!UBERON:0000171;5.21e-07;22!UBERON:0000170;5.21e-07;22!UBERON:0006554;7.98e-07;30!UBERON:0001008;7.98e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,2.87e-15,38;UBERON:0003258,2.87e-15,38;UBERON:0004119,8.65e-13,160;UBERON:0000925,8.65e-13,160;UBERON:0006595,8.65e-13,160;UBERON:0001004,1.23e-11,74;UBERON:0005157,3.47e-11,47;UBERON:0005153,5.04e-11,37;UBERON:0000065,1.01e-10,54;UBERON:0001007,5.01e-10,145;UBERON:0001555,5.01e-10,145;UBERON:0007026,5.01e-10,145;UBERON:0001737,6.04e-10,9;UBERON:0000072,9.34e-10,47;UBERON:0004921,5.07e-09,118;UBERON:0001041,5.32e-09,87;UBERON:0006554,7.72e-09,47;UBERON:0001008,1.71e-08,48;UBERON:0005178,2.75e-08,34;UBERON:0002224,2.75e-08,34;UBERON:0005177,3.28e-08,101;UBERON:0005181,7.05e-08,35;UBERON:0002048,2.96e-07,22;UBERON:0000117,2.96e-07,22;UBERON:0000171,2.96e-07,22;UBERON:0000170,2.96e-07,22;UBERON:0005597,2.96e-07,22;UBERON:0000118,2.96e-07,22;UBERON:0005911,4.42e-07,82;UBERON:0004802,8.89e-07,19;UBERON:0000115,8.89e-07,19 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,3.19454117451962,9.07141518364156,1.96597234917155,2.11013582582763,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,1.06978768047132,0.656804715599566,0.550975469195755,0,0,0.309632246632152,2.75826367343678,3.0120591877825,1.47901604066715,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0.950452044448374,0,0.127986611154418,0,0.473554504088034,0.821127996921047,0.201606743224732,0,0.579297615531196,0,0.670700859703636,0.383587685530591,0.361439152384566,0,0.579386075843295,0,0,0.189069634328136,0.665188192387692,0.614843499851882,0.654895377488563,6.55731518926576,6.3033355273353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79703457356788,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0.352303495931295,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0.368199594569197,0,0,0.201504196455281,0,0.966304265816484,1.09098448236334,3.72845974005705,1.09776335516636,1.06023814657188,0.580969714347592,1.0366105501537,0.504641701751257,1.45990943630332,0,0,1.38134921352481,0,0,2.9576700009961,2.36018566109342,4.09718750801919,2.75734931830985,3.26819166138609,3.08451804844426,3.64044532032444,3.72820783738158,4.23221872641029,0,0,0.8231480226628,0,0,0.982827216677626,0,0,2.58275720940538,0.514703430895577,4.49976170175365,1.1240175325762,3.01586917234893,2.68506490959736,0,0,0,0.463721619900307,0.234817388471643,0,0,0,3.95102198979638,4.29243081047436,0,0,0,2.81201501960331,1.51183915378974,2.1266264586358,2.50763863567975,2.3250715081117,3.4504441124869,0,0,0,0.144119953416961,0.12624243342638,0.317489471460845,1.90994212779139,0,0,1.23392991243988,3.30377363628309,0.857479297891735,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,2.1100756394171,3.48613383440118,3.79897366491817,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.358121926479791,0.112085143993527,0.985153801009636,0.646882724578552,0.77005821767849,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0,0,0.601892199455438,2.27407504055985,0,0,0.368738337083406,0.0868836144680828,0,0,0.620304078368662,0.215714200818617,0.320182673410333,0.909382714338778,1.66435439510497,2.41912234663744,0.496215615637554,0.153461973288062,0.280660094433074,0.640695746278505,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0,2.1754700926492,2.80709058424599,5.70902131402557,0,0,0.393373244878272,1.80479845162965,1.77135275340154,5.49044838423799,1.46139224653261,1.26661954671451,0,0,0,1.54227252690289,0.270946437543853,1.50506932156456,1.52925763827023,2.49322802678617,2.91037181138832,0,0,0,0.984043937099117,0.976135183992909,0.412164046590889,0,0,4.01985876597321,5.85054221432869,0,0,0,0.15350367472613,0.137836572484531,0.429680979473094,0,0,0.0890320356467374,3.14041339185858,0.768760269460425,0.765676274967505,2.2254711788221,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0.823611089208164,0.117812402345686,0,0,0.842516912477962,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,2.21310859268678,3.35151137767894,4.3556393944529,0.470719003883896,4.3050537267123,6.73885902670502,1.7737206141467,2.52695740227655,0,0,0,0.238231775457789,0,0,0,0.79312517629427,1.38871292465715,0,4.6557641036396,0,0,0,0.318852545457645,0,0,0,0,0,0,0,2.50634477090067,4.40158622284169,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,1.49712432326576,0,14.6846231316911,0.111443384277478,0,2.86493381685228,1.78178808499583,3.99308912729002,0,0,0,0,0.63337622438398,0.796991953004279,0.276283915531148,0.755798243562828,2.0453736500431,2.09244169283818,0,0.449341755736634,1.9692329214317,0,0.887790650732402,0,0,0,0.74214478529481,0,1.04171104434093,2.36141999989728,0,3.86897724170699,1.77977555204936,10.1646703160213,0,0,0,0,2.17073589525734,0,0.331737779793674,0.295547618953547,0.87754158861589,1.74301541630384,2.78847488557207,1.00035336054936,0,1.84451123510448,1.79515288819544,3.47671590150426,2.55200927785536,0,1.06606955203727,0,0,0,0,0,0,0,0,3.16497096792041,5.71314828557017,4.38194521445217,0,0.995261931078505,0.176915129006678,0,0,0,0,0.539209063845416,0.802577647298789,0.468528891450678,0,2.93496928398135,0,1.57833761139756,1.20990716048664,0.30607276163049,0.758238955541855,0.60129367765797,1.55532287095871,1.99396161812156,0.661983911750998,1.56966459203613,3.58417289318877,6.26141001265544,0.138674673013139,2.42983633669183,2.05784034570193,4.26590112243973,2.2714466871463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| |||
|short_description=p7@DMKN | |||
}} |
Revision as of 22:49, 20 January 2014
Short description: | p7@DMKN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DMKN_5end |
Coexpression cluster: | C2484_Alveolar_Mallassezderived_Urothelial_epidermoid_Esophageal_Corneal_endometrial |
Association with transcript: | -21bp_to_ENST00000461300, ENST00000462538, ENST00000480507, NR_033746, uc002nzk.3, uc002nzl.3, uc002nzp.2, uc002nzq.2, uc002nzr.2, uc002nzs.2, uc002nzt.2, uc002nzu.2, uc002nzv.2, uc002nzw.2, uc002nzx.3, uc002nzy.3, uc010xsv.1, uc010xsw.1_5end |
EntrezGene: | DMKN |
HGNC: | 25063 |
UniProt: | Q6E0U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.53e-36 | 253 |
endo-epithelial cell | 2.54e-14 | 42 |
endodermal cell | 1.02e-08 | 58 |
epithelial cell of tracheobronchial tree | 6.75e-07 | 9 |
epithelial cell of lower respiratory tract | 6.75e-07 | 9 |
epithelial cell of lung | 8.89e-07 | 19 |
respiratory epithelial cell | 8.96e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 2.87e-15 | 38 |
endoderm of foregut | 2.87e-15 | 38 |
endoderm-derived structure | 8.65e-13 | 160 |
endoderm | 8.65e-13 | 160 |
presumptive endoderm | 8.65e-13 | 160 |
respiratory system | 1.23e-11 | 74 |
epithelial fold | 3.47e-11 | 47 |
epithelial bud | 5.04e-11 | 37 |
respiratory tract | 1.01e-10 | 54 |
digestive system | 5.01e-10 | 145 |
digestive tract | 5.01e-10 | 145 |
primitive gut | 5.01e-10 | 145 |
larynx | 6.04e-10 | 9 |
segment of respiratory tract | 9.34e-10 | 47 |
subdivision of digestive tract | 5.07e-09 | 118 |
foregut | 5.32e-09 | 87 |
urinary system structure | 7.72e-09 | 47 |
renal system | 1.71e-08 | 48 |
thoracic cavity element | 2.75e-08 | 34 |
thoracic cavity | 2.75e-08 | 34 |
trunk region element | 3.28e-08 | 101 |
thoracic segment organ | 7.05e-08 | 35 |
lung | 2.96e-07 | 22 |
respiratory tube | 2.96e-07 | 22 |
respiration organ | 2.96e-07 | 22 |
pair of lungs | 2.96e-07 | 22 |
lung primordium | 2.96e-07 | 22 |
lung bud | 2.96e-07 | 22 |
endo-epithelium | 4.42e-07 | 82 |
respiratory tract epithelium | 8.89e-07 | 19 |
lung epithelium | 8.89e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.95e-23 | 106 |
cell type cancer | 3.53e-19 | 143 |
cancer | 1.95e-11 | 235 |
disease of cellular proliferation | 1.04e-10 | 239 |
adenocarcinoma | 1.82e-10 | 25 |
squamous cell carcinoma | 1.38e-07 | 14 |