FFCP PHASE1:Hg19::chr19:38755237..38755321,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10653 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11247 | |||
|TSSclassifier=strong | |||
|UniProt=O43291 | |||
|association_with_transcript=35bp_to_uc002ohr.1,uc002ohs.1_5end | |||
|coexpression_cluster_id=C1820 | |||
|description=CAGE_peak_2_at_SPINT2_5end | |||
|id=chr19:38755237..38755321,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.99e-14!254;CL:0002076!4.86e-14!43;CL:0000223!4.65e-09!59;CL:0002368!7.47e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.74e-12;42!CL:0002251;7.32e-07;20!CL:0002368;7.99e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.08e-16,253;CL:0002076,3.18e-15,42;CL:0000223,3.11e-10,58;CL:0002251,7.45e-07,20;CL:0002368,8.10e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!2.31e-10!25;DOID:305!9.08e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:299;9.36e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.52e-11,106;DOID:299,8.88e-11,25 | |||
|ontology_enrichment_uberon=UBERON:0000464!3.34e-13!104;UBERON:0007023!3.90e-13!115;UBERON:0000062!1.78e-12!511;UBERON:0004119!1.54e-09!169;UBERON:0000925!1.54e-09!169;UBERON:0006595!1.54e-09!169;UBERON:0000466!2.52e-09!126;UBERON:0002553!3.30e-08!70;UBERON:0000064!6.74e-08!219;UBERON:0005177!9.97e-08!107;UBERON:0001008!8.37e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;7.46e-07;30!UBERON:0001008;7.46e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.09e-13,114;UBERON:0001008,2.92e-08,48;UBERON:0006554,3.50e-08,47;UBERON:0005177,5.71e-08,101;UBERON:0004119,9.41e-08,160;UBERON:0000925,9.41e-08,160;UBERON:0006595,9.41e-08,160 | |||
|phase1_expression=1.99846217197612,1.92690471501885,2.81908808191942,10.007329835313,3.5756887554183,12.2127393374052,2.53299878168311,0,0,70.525639775933,278.422666020999,152.47207774686,150.874711546675,2.72285976512103,6.62794751455832,0,0.602694528023977,0.730310090387373,0.487932798790507,3.93987385845721,3.26401105990805,1.88072832886853,1.14494394852423,1.36874425072884,1.25542639594803,0,0,0,12.5876568591649,3.83829398097213,17.1845896880844,117.685916733303,124.699250374196,106.489154928035,0,1.13735385989937,14.6800219667424,6.09394949385065,3.81034450193269,6.72733699219141,16.1219141452746,10.3645973126073,17.7727141667589,4.36194716338694,4.91238726795452,4.60909716256851,3.71886459049095,8.22335776043652,4.02618282163635,6.90461741573161,7.94098190240212,8.51336027598907,4.13694816883942,9.68227025375739,4.06279459783025,6.40023954444856,6.27684145133045,4.49446968890169,6.42776173978895,9.62787081228281,4.47535988059329,3.95821560224059,10.3721101963249,5.54092175692502,6.96502172708602,7.37600792098482,6.22822248995575,7.03496262718881,9.90817544998383,6.95004303056373,12.1079900526674,8.47038562771399,8.86094684834476,6.33765858935825,9.779797798392,11.740884148469,9.32327638515909,10.3622056060639,4.98249318760948,5.41524213108372,7.75775041076451,4.38393969035121,3.51992488922645,3.27683166757279,0.889509253863555,3.84057200309856,4.40435585739614,2.29900975981793,6.61044872784862,2.86216126360609,3.41527781465669,4.69789751496751,1.91136614062614,9.25199300053181,11.2101712596307,19.7538063581308,1.96709770113833,1.96505381374582,1.23360899399706,1.5046784585161,3.2592226663359,4.2610302516126,3.89653456815823,0.779873198196215,0.589211814949674,1.55073726208535,0,6.40456598628376,3.25148368899696,1.97325485524411,1.38175008892924,0.869409257205157,1.92772532110679,4.54819407752512,2.09071047609954,0.679856056185397,3.06576394881537,2.74901956386104,1.01207876807801,1.91139248594458,0,0.950452044448374,1.80690142893327,1.4078527226986,1.24930726552346,0.710331756132051,1.64225599384209,0.80642697289893,0.267440195783507,1.30341963494519,0,0.670700859703636,1.40648818027883,2.1686349143074,5.51471701699479,5.35932120155048,1.5905718941022,8.75942766544745,8.41359872760204,14.4124108350667,18.6209745669427,22.0699742213646,286.700391886231,178.718101422095,130.143504855528,107.089788439049,102.510587560045,28.1418936680304,21.7358066096449,30.0880576076948,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0,0.402829317109147,0.760272105718513,3.1728067481262,0,0,4.28638695763583,2.91888184414021,3.71617885594963,0,0,0.366403487860815,6.58902087180316,0,234.618600052683,4.47274756525787,3.92554586160197,0,5.16305917347865,1.77334191099179,8.41016400213461,0,3.20667812942308,0,0,0.326923806226917,0.605429710579726,0.576175924479999,0,0,2.85235910772225,0,0,0,0,0,0.61417158655884,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.919463387397059,2.25357088359895,0.453728732640084,2.69084453533293,7.26095121983129,1.69545520927649,1.50045548042201,1.13357782162283,1.54584324027377,3.7223371266318,0.168776332241266,0.389748020644795,0.504867548488229,1.74894807420369,0.161646056818812,2.84007674013291,1.81353776809752,0.169560592310488,147.844552669922,101.734302980381,116.155861132547,17.5642136826617,14.8433340520063,20.3339400021657,19.591939397905,19.9333472191746,14.2341170039574,4.69348596989448,5.78916844373597,4.14404764057442,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,2.4694440679884,4.41026134156626,0,0,4.72631925345123,0,66.2907683747382,7.89211927373218,112.055041402207,105.657648062162,110.682398625206,83.4221890878352,0,0,15.8764476227801,16.6939783164111,8.57083467921498,4.47535988059329,2.77791307545966,4.37584550139576,169.103741163285,150.235078366603,17.2351904261178,1.63802985597466,11.8904929830983,223.086524888529,164.454503506683,113.987178182879,89.9167567936597,121.194352360322,131.883641632833,8.86793828212698,23.5969803155446,11.817702585824,10.0883967391873,9.97315224068402,0.317489471460845,0,0,5.13217338068116,0,0,0,0.224262168690721,3.48768055066624,0.1466765716419,0.387815147273333,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.499864955910285,13.378615870531,20.5925407487172,8.43335757932127,7.42837052023906,14.9320516584348,0,0.434343920002738,0,0,0,0.985153801009636,1.07813787429759,1.92514554419623,0.254094624222463,0,4.63973287666617,2.51274398001523,3.82763250991898,2.99602809578873,8.97484377612075,5.8018171881045,1.2269149171914,5.00170521059677,0.271265023699736,4.15941723061614,1.78428988797162,4.88877486605197,1.99140405487612,0.300946099727719,2.27407504055985,2.0694614258501,0,0.921845842708516,0.521301686808497,4.11182430671755,2.05886054286514,1.86091223510599,3.66714141391649,3.62873696531711,41.8316048595838,143.134477979027,58.9661071992877,1.73675465473144,1.99500565274481,1.68396056659844,2.81906128362542,2.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| |||
|short_description=p2@SPINT2 | |||
}} |
Revision as of 23:05, 20 January 2014
Short description: | p2@SPINT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPINT2_5end |
Coexpression cluster: | C1820_amniotic_Corneal_Urothelial_smallcell_Alveolar_endometrial_choriocarcinoma |
Association with transcript: | 35bp_to_uc002ohr.1, uc002ohs.1_5end |
EntrezGene: | SPINT2 |
HGNC: | 11247 |
UniProt: | O43291 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.08e-16 | 253 |
endo-epithelial cell | 3.18e-15 | 42 |
endodermal cell | 3.11e-10 | 58 |
epithelial cell of alimentary canal | 7.45e-07 | 20 |
respiratory epithelial cell | 8.10e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.09e-13 | 114 |
renal system | 2.92e-08 | 48 |
urinary system structure | 3.50e-08 | 47 |
trunk region element | 5.71e-08 | 101 |
endoderm-derived structure | 9.41e-08 | 160 |
endoderm | 9.41e-08 | 160 |
presumptive endoderm | 9.41e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.52e-11 | 106 |
adenocarcinoma | 8.88e-11 | 25 |