FFCP PHASE1:Hg19::chr2:51259724..51259734,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=9378 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8008 | |||
|TSSclassifier=strong | |||
|UniProt=E7EQN4,Q9ULB1,A7E294,A4FVB9,Q49A31 | |||
|association_with_transcript=-50bp_to_ENST00000405581,ENST00000406316,NM_001135659,NM_004801,uc002rxd.1,uc002rxe.3,uc010fbq.2_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_13_at_NRXN1_5end | |||
|id=chr2:51259724..51259734,- | |||
|ontology_enrichment_celltype=CL:0002322!2.77e-10!5;CL:0000047!2.01e-09!8;CL:0000540!4.14e-09!6;CL:0000031!4.14e-09!6;CL:0000404!4.14e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.48e-08;6!CL:0000404;2.48e-08;6!CL:0000123;9.70e-08;2!CL:0000242;9.70e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.54e-09,8;CL:0000540,2.98e-08,6;CL:0000031,2.98e-08,6;CL:0000404,2.98e-08,6;CL:0000242,1.24e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.41e-15;82!UBERON:0006215;1.05e-10;3!UBERON:0006241;1.62e-09;3!UBERON:0003057;1.62e-09;3!CL:0000031;2.48e-08;6!UBERON:0010122;1.59e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.18e-88!82;UBERON:0005743!1.14e-86!86;UBERON:0001049!4.78e-85!57;UBERON:0005068!4.78e-85!57;UBERON:0006241!4.78e-85!57;UBERON:0007135!4.78e-85!57;UBERON:0000073!7.01e-83!94;UBERON:0001016!7.01e-83!94;UBERON:0000955!3.16e-73!69;UBERON:0006238!3.16e-73!69;UBERON:0002780!2.30e-71!41;UBERON:0001890!2.30e-71!41;UBERON:0006240!2.30e-71!41;UBERON:0002616!2.82e-71!59;UBERON:0003080!1.99e-69!42;UBERON:0003075!5.78e-59!86;UBERON:0007284!5.78e-59!86;UBERON:0002020!1.58e-58!34;UBERON:0003528!1.58e-58!34;UBERON:0001893!2.37e-58!34;UBERON:0002791!2.31e-56!33;UBERON:0002346!1.04e-55!90;UBERON:0001869!5.45e-55!32;UBERON:0003056!1.53e-49!61;UBERON:0002619!1.10e-46!22;UBERON:0004121!1.56e-42!169;UBERON:0001950!1.77e-42!20;UBERON:0000924!3.65e-41!173;UBERON:0006601!3.65e-41!173;UBERON:0000956!1.72e-40!25;UBERON:0000203!1.72e-40!25;UBERON:0007023!1.00e-38!115;UBERON:0000033!1.19e-38!123;UBERON:0000153!3.44e-36!129;UBERON:0007811!3.44e-36!129;UBERON:0002420!1.80e-19!9;UBERON:0007245!1.80e-19!9;UBERON:0010009!1.80e-19!9;UBERON:0010011!1.80e-19!9;UBERON:0000454!1.80e-19!9;UBERON:0002308!2.46e-19!9;UBERON:0000125!2.46e-19!9;UBERON:0000025!1.94e-18!194;UBERON:0003076!2.16e-16!15;UBERON:0003057!2.16e-16!15;UBERON:0009663!1.29e-15!7;UBERON:0000200!1.58e-14!6;UBERON:0001871!2.09e-14!7;UBERON:0001894!4.92e-14!7;UBERON:0006222!4.92e-14!7;UBERON:0002021!1.06e-12!5;UBERON:0004111!3.17e-12!241;UBERON:0001872!5.43e-12!5;UBERON:0000349!8.19e-12!5;UBERON:0004733!2.98e-11!12;UBERON:0002028!2.98e-11!12;UBERON:0007277!2.98e-11!12;UBERON:0004732!2.88e-10!13;UBERON:0000369!2.95e-10!4;UBERON:0002435!2.95e-10!4;UBERON:0000204!2.95e-10!4;UBERON:0010082!2.95e-10!4;UBERON:0000483!3.61e-10!309;UBERON:0000064!3.68e-10!219;UBERON:0000119!6.15e-10!312;UBERON:0000477!1.66e-09!286;UBERON:0002298!2.39e-09!8;UBERON:0000475!4.17e-09!365;UBERON:0002680!4.95e-09!9;UBERON:0001895!4.95e-09!9;UBERON:0010092!4.95e-09!9;UBERON:0003296!1.42e-08!4;UBERON:0010133!1.42e-08!4;UBERON:0002771!3.25e-08!3;UBERON:0005383!4.21e-08!3;UBERON:0005382!4.21e-08!3;UBERON:0000988!2.01e-07!3;UBERON:0002240!2.46e-07!3;UBERON:0006331!5.77e-07!3;UBERON:0000922!6.39e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.41e-55;32!UBERON:0002619;1.12e-53;22!UBERON:0003528;1.41e-53;34!UBERON:0002020;1.41e-53;34!UBERON:0002791;3.81e-52;32!UBERON:0001893;4.54e-49;34!UBERON:0001950;5.97e-48;20!UBERON:0000956;7.73e-47;25!UBERON:0000203;7.73e-47;25!UBERON:0002780;3.90e-42;41!UBERON:0001890;3.90e-42;41!UBERON:0000073;1.86e-39;53!UBERON:0002616;1.86e-39;53!UBERON:0000955;6.70e-32;68!UBERON:0001017;4.13e-31;75!UBERON:0001016;3.31e-26;83!UBERON:0000200;1.46e-19;6!UBERON:0002021;4.19e-17;5!UBERON:0000125;8.07e-17;9!UBERON:0002308;8.07e-17;9!UBERON:0004733;2.22e-15;12!UBERON:0002028;2.22e-15;12!UBERON:0004732;4.29e-14;13!UBERON:0000369;1.37e-13;4!UBERON:0002435;1.37e-13;4!UBERON:0000204;1.37e-13;4!UBERON:0002420;7.75e-13;9!UBERON:0007245;7.75e-13;9!UBERON:0010009;7.75e-13;9!UBERON:0010011;7.75e-13;9!UBERON:0000454;7.75e-13;9!UBERON:0002298;2.74e-12;6!UBERON:0002680;3.07e-12;9!UBERON:0001895;3.07e-12;9!UBERON:0001871;6.05e-12;6!UBERON:0009663;8.23e-12;7!UBERON:0007023;2.51e-11;114!UBERON:0001870;6.22e-11;3!UBERON:0001872;6.65e-11;5!UBERON:0011216;8.49e-11;132!UBERON:0000349;1.21e-10;5!UBERON:0005383;1.22e-10;3!UBERON:0005382;1.22e-10;3!UBERON:0000988;1.01e-09;3!UBERON:0002240;1.62e-09;3!UBERON:0005174;1.62e-09;3!UBERON:0001137;1.62e-09;3!UBERON:0002702;5.68e-08;2!UBERON:0002771;1.33e-07;2!UBERON:0001873;1.59e-07;2!UBERON:0001954;2.23e-07;2!UBERON:0003022;2.23e-07;2!UBERON:0002421;2.23e-07;2!UBERON:0002600;2.23e-07;2!UBERON:0002148;5.85e-07;2!UBERON:0006331;5.85e-07;2!UBERON:0009662;5.85e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.47e-82,81;UBERON:0001049,1.86e-81,56;UBERON:0005068,1.86e-81,56;UBERON:0006241,1.86e-81,56;UBERON:0007135,1.86e-81,56;UBERON:0001016,1.43e-79,89;UBERON:0000073,9.92e-74,53;UBERON:0002616,9.92e-74,53;UBERON:0000955,4.47e-65,68;UBERON:0006238,4.47e-65,68;UBERON:0003528,1.60e-62,34;UBERON:0002020,1.60e-62,34;UBERON:0001869,4.90e-62,32;UBERON:0002780,7.84e-59,41;UBERON:0001890,7.84e-59,41;UBERON:0003080,7.84e-59,41;UBERON:0006240,7.84e-59,41;UBERON:0001893,4.50e-58,34;UBERON:0002791,2.37e-57,32;UBERON:0002619,9.96e-54,22;UBERON:0003075,1.10e-52,82;UBERON:0007284,1.10e-52,82;UBERON:0002346,8.74e-50,86;UBERON:0001950,5.61e-48,20;UBERON:0000956,6.96e-47,25;UBERON:0000203,6.96e-47,25;UBERON:0010371,2.76e-44,104;UBERON:0004121,3.94e-40,171;UBERON:0000924,3.94e-40,171;UBERON:0006601,3.94e-40,171;UBERON:0003056,2.84e-37,61;UBERON:0007023,4.44e-33,114;UBERON:0011216,5.28e-31,223;UBERON:0010314,6.59e-31,132;UBERON:0003076,1.28e-22,15;UBERON:0003057,1.28e-22,15;UBERON:0000200,1.69e-19,6;UBERON:0000025,2.73e-19,192;UBERON:0002021,5.74e-17,5;UBERON:0000125,1.06e-16,9;UBERON:0002308,1.06e-16,9;UBERON:0004733,1.89e-15,12;UBERON:0002028,1.89e-15,12;UBERON:0007277,1.89e-15,12;UBERON:0004732,3.71e-14,13;UBERON:0000369,1.38e-13,4;UBERON:0002435,1.38e-13,4;UBERON:0000204,1.38e-13,4;UBERON:0010082,1.38e-13,4;UBERON:0004111,2.09e-13,240;UBERON:0002420,8.53e-13,9;UBERON:0007245,8.53e-13,9;UBERON:0010009,8.53e-13,9;UBERON:0010011,8.53e-13,9;UBERON:0000454,8.53e-13,9;UBERON:0002298,2.64e-12,6;UBERON:0002680,2.89e-12,9;UBERON:0001895,2.89e-12,9;UBERON:0010092,2.89e-12,9;UBERON:0001871,5.41e-12,6;UBERON:0009663,8.72e-12,7;UBERON:0001870,4.86e-11,3;UBERON:0001872,6.75e-11,5;UBERON:0000349,1.15e-10,5;UBERON:0005383,1.30e-10,3;UBERON:0005382,1.30e-10,3;UBERON:0000483,1.48e-10,306;UBERON:0000119,2.37e-10,309;UBERON:0000988,1.13e-09,3;UBERON:0002240,1.48e-09,3;UBERON:0005174,1.48e-09,3;UBERON:0001137,1.48e-09,3;UBERON:0002702,5.41e-08,2;UBERON:0002771,1.20e-07,2;UBERON:0001873,1.51e-07,2;UBERON:0010122,1.51e-07,2;UBERON:0001954,2.09e-07,2;UBERON:0003022,2.09e-07,2;UBERON:0002421,2.09e-07,2;UBERON:0002600,2.09e-07,2;UBERON:0002148,7.62e-07,2;UBERON:0006331,7.62e-07,2;UBERON:0009662,7.62e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,1.32529768321485,0.813357600086629,0.310983165046111,1.7662459561294,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,1.17261385734044,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,3.51673541026282,0,0,0,0,0,2.26739473068848,0,0,0,0,0,0,0,0,0,3.87733098438087,2.59750674853184,7.98455192004777,0,0,0,0,0,0,3.79217710565611,0,0.520874984799877,4.42870692906919,2.53252521113357,4.5774520895125,3.98085335752409,3.54657142744257,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,1.1713222286267,0,0,0,0,0,6.42752799424029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,3.98858014522036,0,0,0,0,0,0,1.37275998289572,0,0,0,0,0,0,0,4.20294202096853,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,2.45166131000836,0.482259445395058,1.10031549277787,2.9080823662043,0,0,5.10296275927407,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19781025814636,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31640907980192,5.00307686098049,4.38168257472749,0,1.44207766997908,1.55241007353459,0.415045904808692,0,0,0,0,4.21501415226193,3.18826262943815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94157053998399,0,0,1.85656384926424,0,0,0,0,0,0,6.40456598628376,0,0,3.85375350578757,12.7526918693026,2.23487402680012,3.28186182785208,12.8556565073076,4.21859240031729,7.10492840780145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22874029240702,0.781078098613847,3.72036233702131,2.72687983833799,8.20462213527329,0,0,0,0,0.535701835878287,0.336283722218824,0.606965604236632,2.04895972216168,0,0,0,2.7867590520501,3.28863867814245,0,0,0,4.08500533781605,0,0,0,0,0.0714765441766563,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,7.95803100645473,0,0,0.329821550236287,2.8682940277668,0.0771741581079447,0,0,0,2.35676547101626,1.76677620403451,1.18818560130834,2.5359343655004,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,4.82739580355494,8.29066311646717,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,2.48750831837634,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@NRXN1 | |||
}} |
Revision as of 03:06, 21 January 2014
Short description: | p13@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_NRXN1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -50bp_to_ENST00000405581, ENST00000406316, NM_001135659, NM_004801, uc002rxd.1, uc002rxe.3, uc010fbq.2_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | E7EQN4Q9ULB1A7E294A4FVB9Q49A31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.54e-09 | 8 |
neuron | 2.98e-08 | 6 |
neuroblast | 2.98e-08 | 6 |
electrically signaling cell | 2.98e-08 | 6 |
Merkel cell | 1.24e-07 | 2 |