FFCP PHASE1:Hg19::chr2:154335173..154335188,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56475 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24201 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NS64 | |||
|association_with_transcript=133bp_to_ENST00000325926,NM_019845,uc002tyq.1_5end | |||
|description=CAGE_peak_2_at_RPRM_5end | |||
|id=chr2:154335173..154335188,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.61e-12;5!CL:0002586;2.39e-09;3!CL:0000149;4.44e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.83e-12,5;CL:0002586,2.33e-09,3;CL:0000149,4.37e-07,4;CL:0000540,9.52e-07,6;CL:0000031,9.52e-07,6;CL:0000404,9.52e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.18e-38!86;UBERON:0000073!9.02e-38!94;UBERON:0001016!9.02e-38!94;UBERON:0001017!3.00e-34!82;UBERON:0001049!5.44e-30!57;UBERON:0005068!5.44e-30!57;UBERON:0006241!5.44e-30!57;UBERON:0007135!5.44e-30!57;UBERON:0007023!1.35e-29!115;UBERON:0003075!1.54e-29!86;UBERON:0007284!1.54e-29!86;UBERON:0002346!1.71e-28!90;UBERON:0000955!7.22e-28!69;UBERON:0006238!7.22e-28!69;UBERON:0003056!8.72e-26!61;UBERON:0002780!1.33e-25!41;UBERON:0001890!1.33e-25!41;UBERON:0006240!1.33e-25!41;UBERON:0002616!2.39e-25!59;UBERON:0003080!1.03e-24!42;UBERON:0001893!2.15e-21!34;UBERON:0002020!2.91e-21!34;UBERON:0003528!2.91e-21!34;UBERON:0002791!1.96e-20!33;UBERON:0000033!4.98e-20!123;UBERON:0001869!5.32e-20!32;UBERON:0000153!9.48e-20!129;UBERON:0007811!9.48e-20!129;UBERON:0004121!3.87e-19!169;UBERON:0000924!7.33e-19!173;UBERON:0006601!7.33e-19!173;UBERON:0000956!5.76e-18!25;UBERON:0000203!5.76e-18!25;UBERON:0001950!2.41e-17!20;UBERON:0002619!4.41e-17!22;UBERON:0000200!1.44e-07!6;UBERON:0000966!1.91e-07!5;UBERON:0005388!1.91e-07!5;UBERON:0001802!1.91e-07!5;UBERON:0001872!4.33e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.90e-28;20!UBERON:0002619;2.02e-25;22!UBERON:0000956;5.49e-25;25!UBERON:0000203;5.49e-25;25!UBERON:0001869;1.19e-21;32!UBERON:0001893;5.43e-20;34!UBERON:0002791;3.85e-19;32!UBERON:0003528;2.18e-17;34!UBERON:0002020;2.18e-17;34!UBERON:0002780;1.97e-15;41!UBERON:0001890;1.97e-15;41!UBERON:0001872;6.65e-13;5!UBERON:0000073;2.11e-11;53!UBERON:0002616;2.11e-11;53!UBERON:0000955;3.61e-10;68!UBERON:0000966;1.55e-09;5!UBERON:0005388;1.55e-09;5!UBERON:0001802;1.55e-09;5!UBERON:0001781;2.39e-09;3!UBERON:0001782;2.39e-09;3!UBERON:0001017;4.15e-09;75!UBERON:0002021;1.10e-08;5!UBERON:0000922;1.22e-08;49!UBERON:0001016;5.48e-08;83!UBERON:0000200;7.91e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.48e-28,20;UBERON:0002619,1.75e-25,22;UBERON:0000956,4.41e-25,25;UBERON:0000203,4.41e-25,25;UBERON:0001017,1.06e-24,81;UBERON:0001869,1.59e-23,32;UBERON:0001016,7.25e-23,89;UBERON:0001893,7.06e-22,34;UBERON:0003056,1.50e-21,61;UBERON:0002780,1.74e-21,41;UBERON:0001890,1.74e-21,41;UBERON:0003080,1.74e-21,41;UBERON:0006240,1.74e-21,41;UBERON:0000955,2.43e-21,68;UBERON:0006238,2.43e-21,68;UBERON:0002791,5.05e-21,32;UBERON:0003528,1.54e-19,34;UBERON:0002020,1.54e-19,34;UBERON:0001049,2.80e-19,56;UBERON:0005068,2.80e-19,56;UBERON:0006241,2.80e-19,56;UBERON:0007135,2.80e-19,56;UBERON:0000073,8.18e-19,53;UBERON:0002616,8.18e-19,53;UBERON:0003075,2.16e-18,82;UBERON:0007284,2.16e-18,82;UBERON:0002346,3.51e-17,86;UBERON:0010371,3.93e-14,104;UBERON:0004121,4.97e-13,171;UBERON:0000924,4.97e-13,171;UBERON:0006601,4.97e-13,171;UBERON:0001872,7.22e-13,5;UBERON:0010314,2.09e-10,132;UBERON:0011216,2.19e-09,223;UBERON:0001782,2.33e-09,3;UBERON:0005424,2.33e-09,3;UBERON:0007023,8.74e-09,114;UBERON:0002021,9.22e-09,5;UBERON:0000966,6.20e-08,6;UBERON:0005388,6.20e-08,6;UBERON:0001802,6.20e-08,6;UBERON:0001781,4.37e-07,4;UBERON:0000200,7.15e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,1.88072832886853,0,0.684372125364421,2.88748071068046,0,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,1.90090408889675,0,0,1.24930726552346,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.756278537312543,0.443458794925128,0.614843499851882,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,1.46368447355514,1.32529768321485,2.32387885739037,1.45125477021519,2.27088765788066,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82570336417754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.508189248444927,0,0.773288812777695,4.35542289869307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59030175162945,8.85639543389205,9.11059505060049,0,0.457847324091717,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,6.94356462328575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20476840718897,0,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,2.90799823828566,1.94813006139888,23.9536557601433,0,0,0,0,0.508507300585533,0,0.344743373241465,0,0,0,0.60298219312704,0,0,0.295547618953547,0.658156191461918,0,0,1.76985594558733,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51472047819464,0,0.619202951523374,0.611030144933625,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0.789168805698781,0,10.4064738954367,0.126373159256976,12.6271672308174,10.3688191397247,0,0,0,0,0.284609546029793,0,0,0,0,2.97035336011451,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0.387956065953678,0,0,0,0,2.72236422610278,0,1.12222348352147,0.213452994739353,0,0,0,7.20698991020251,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.681017030557878,1.60753148465019,1.92555211236127,1.24632101408756,0,0,3.09822738955926,0,0.236417121897595,0.209818352539992,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.387848869084652,0.66116300871345,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0.157054096250234,0.886068179966986,2.3184990331373,1.6274820991845,1.14681839138014,0.554645257684261,0.558867626472451,5.53394539744923,0,0,0,0,0,5.07223600137888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93433888087225,5.48088013126944,0,0,0,0,2.16161013012681,0,0,0,0,0,0.345430341731199,0,0.967809053062115,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,1.15104934173287,0.107824811396682,0.157265941855896,0.218419276384028,0,0.212574920101683,0,0,0,0,3.20228299314188,0,0,1.22035527683273,0,1.75597244962866,3.48697819209284,7.56215088665154,2.83544735103293,1.61475645631851,0,0,0,0,0,0,0,0,2.18109952212846,0,0,0,0,0,1.75597720007826,3.90539049306924,1.65349437200947,2.09272173639893,2.18789923607288,1.09651553371436,0,0,0,1.60710550763486,0,1.82089681270989,0.91064876540519,0.177404740325278,0.230467975111559,0.514464028312255,0.203909198930495,3.42018422526815,0,0,1.33438257845874,0.471346769748006,0,0.913158720509496,0,0,0.714765441766563,7.58465336317088,0,0,0,0,0,0,0,0,0,1.27016115057279,0.22910686854405,0,0,0,0,0,0,0.205325613712494,0,0,1.63757624423474,0,0,1.35535298446752,6.59643100472575,0.150962843566674,0.0771741581079447,0,5.64380755633827,0.980593287015622,3.06379511232114,0.392616934229891,0,2.113278637917,0,0.187967835959707,0,0,0,0,0,1.46067277649303,0.458729283404541,0.286679166302903,3.94428905482962,3.80752345069122,2.61810414204226,0.5290268405154,0,0,0,0.504665699340316,5.24474745425739,1.77377901416012,3.05966489225945,2.6721740526556,1.10273879441814,0,0.303114792872958,0.267964130156178,0.829169439458779,0.620597975171371,0.213233981900981,0,0,0.186224142887574,0,0.318235791390825,0.202117188958219,0,0,0.0673520530145875,0.860666464712116,0,0.162806537221949,0.213454691755431,0,0,0,3.54500188130313,3.66206560484165,0,0.201273793591026,0 | |||
|short_description=p2@RPRM | |||
}} |
Revision as of 06:04, 21 January 2014
Short description: | p2@RPRM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPRM_5end |
Coexpression cluster: | NA |
Association with transcript: | 133bp_to_ENST00000325926, NM_019845, uc002tyq.1_5end |
EntrezGene: | RPRM |
HGNC: | 24201 |
UniProt: | Q9NS64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.83e-12 | 5 |
retinal pigment epithelial cell | 2.33e-09 | 3 |
visual pigment cell | 4.37e-07 | 4 |
neuron | 9.52e-07 | 6 |
neuroblast | 9.52e-07 | 6 |
electrically signaling cell | 9.52e-07 | 6 |