FFCP PHASE1:Hg19::chr2:175412101..175412118,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000412835_5end | |||
|coexpression_cluster_id=C4146 | |||
|description=CAGE_peak_1_at_ENST00000412835_5end | |||
|id=chr2:175412101..175412118,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.06e-08!3;CL:0002563!1.64e-07!4;CL:0002253!4.14e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.12e-18;4!CL:0002253;8.22e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.53e-18,4;CL:0002253,8.24e-17,2;CL:0000223,1.09e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.88e-09;1 | |||
|ontology_enrichment_disease=DOID:14566!2.55e-21!239;DOID:162!7.08e-20!235;DOID:0050687!2.36e-15!143;DOID:8692!6.14e-14!31;DOID:0050686!1.09e-11!137;DOID:1240!2.09e-10!39;DOID:299!1.49e-09!25;DOID:305!2.43e-09!106;DOID:2531!1.83e-08!51;DOID:0060083!1.83e-08!51;DOID:1036!3.22e-08!8;DOID:5409!2.57e-07!4;DOID:4468!5.71e-07!2;DOID:1325!7.76e-07!7;DOID:3904!7.76e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:4468;8.22e-17;2!DOID:299;9.79e-15;25!DOID:3119;2.64e-14;14!DOID:0050619;7.96e-10;1!DOID:1357;7.96e-10;1!DOID:1799;1.16e-09;1!DOID:10165;1.16e-09;1!DOID:1798;1.16e-09;1!DOID:5409;4.07e-09;4!DOID:0050615;2.29e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.77e-17,143;DOID:4468,1.99e-16,2;DOID:299,1.28e-14,25;DOID:3119,2.43e-14,14;DOID:305,3.19e-14,106;DOID:162,7.96e-13,235;DOID:14566,1.76e-12,239;DOID:0050619,7.98e-10,1;DOID:1357,7.98e-10,1;DOID:1799,1.12e-09,1;DOID:10165,1.12e-09,1;DOID:1798,1.12e-09,1;DOID:5409,3.01e-09,4;DOID:0050686,6.55e-09,137;DOID:0050615,2.04e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.06e-08!3;UBERON:0000920!1.06e-08!3;UBERON:0001242!1.64e-07!4;UBERON:0001262!1.64e-07!4;UBERON:0004786!1.64e-07!4;UBERON:0004808!1.64e-07!4;UBERON:0001277!1.64e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;2.12e-18;4!UBERON:0001262;2.12e-18;4!UBERON:0004786;2.12e-18;4!UBERON:0004808;2.12e-18;4!UBERON:0001277;2.12e-18;4!UBERON:0000485;9.26e-11;7!UBERON:0003929;9.26e-11;7!UBERON:0001764;7.96e-10;1!UBERON:0001825;7.96e-10;1!UBERON:0000997;1.16e-09;1!UBERON:0005056;1.16e-09;1!UBERON:0004176;1.16e-09;1!UBERON:0003350;1.77e-09;8!UBERON:0001052;7.28e-09;4!UBERON:0005409;1.46e-08;22!UBERON:0005911;2.19e-08;36!UBERON:0000945;1.91e-07;5!UBERON:0010039;1.91e-07;5!UBERON:0004907;2.94e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.53e-18,4;UBERON:0001262,1.53e-18,4;UBERON:0004786,1.53e-18,4;UBERON:0004808,1.53e-18,4;UBERON:0001277,1.53e-18,4;UBERON:0001764,7.98e-10,1;UBERON:0001825,7.98e-10,1;UBERON:0000997,1.32e-09,1;UBERON:0005056,1.32e-09,1;UBERON:0003350,1.51e-09,8;UBERON:0001052,7.29e-09,4;UBERON:0000485,1.53e-08,9;UBERON:0005409,1.31e-07,25;UBERON:0004907,2.94e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8448265781467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,0.403599414382095,0,0,0.921722292925374,0.223676107892416,1.83534055883099,0,0.556812347790485,0,0.540911356951966,0.99921590399346,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.922255617552241,0.538545866458633,1.84700532267414,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0.902382642468723,0.19606253431774,0.167821586975843,0.37950746544837,0,1.26598838716816,1.14262965711403,1.97894300007517,1.08194319871046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15583274311631,0,0,0,0,0,0,0,0.529536760149002,0,2.46675464364152,0.794858446811959,0,0,0.480952921509202,0,1.79828648623917,0,4.12331746197296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,1.47305718976163,0,0,0,0,0,1.40963004463334,0,0,0,0,0.592834895693833,0,0,0,0,0,0,13.1925440850197,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.491545817507439,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80682027481408,0,2.3571602503328,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41923792260222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3948971044175,0,0,0,0,0,0,0.473328002922261,0.426067023795788,0,1.3746412112643,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0.356760272332706,12.7629072704025,0,1.96251696636676,0,0,2.35158648180761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64708051314868,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,1.60091018816573,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000412835 | |||
}} |
Revision as of 06:41, 21 January 2014
Short description: | p1@ENST00000412835 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000412835_5end |
Coexpression cluster: | C4146_maxillary_small_smallcell_lung_Prostate_gastric_pancreatic |
Association with transcript: | 0bp_to_ENST00000412835_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.53e-18 | 4 |
epithelial cell of large intestine | 8.24e-17 | 2 |
endodermal cell | 1.09e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.53e-18 | 4 |
wall of intestine | 1.53e-18 | 4 |
gastrointestinal system mucosa | 1.53e-18 | 4 |
gastrointestinal system epithelium | 1.53e-18 | 4 |
intestinal epithelium | 1.53e-18 | 4 |
maxillary sinus | 7.98e-10 | 1 |
paranasal sinus | 7.98e-10 | 1 |
mammalian vulva | 1.32e-09 | 1 |
external female genitalia | 1.32e-09 | 1 |
epithelium of mucosa | 1.51e-09 | 8 |
rectum | 7.29e-09 | 4 |
simple columnar epithelium | 1.53e-08 | 9 |
gastrointestinal system | 1.31e-07 | 25 |
lower digestive tract | 2.94e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.77e-17 | 143 |
clear cell adenocarcinoma | 1.99e-16 | 2 |
adenocarcinoma | 1.28e-14 | 25 |
gastrointestinal system cancer | 2.43e-14 | 14 |
carcinoma | 3.19e-14 | 106 |
cancer | 7.96e-13 | 235 |
disease of cellular proliferation | 1.76e-12 | 239 |
paranasal sinus cancer | 7.98e-10 | 1 |
maxillary sinus cancer | 7.98e-10 | 1 |
islet cell tumor | 1.12e-09 | 1 |
endocrine pancreas cancer | 1.12e-09 | 1 |
pancreatic endocrine carcinoma | 1.12e-09 | 1 |
lung small cell carcinoma | 3.01e-09 | 4 |
organ system cancer | 6.55e-09 | 137 |
respiratory system cancer | 2.04e-08 | 16 |