FFCP PHASE1:Hg19::chr2:234580789..234580822,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=54600 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12541 | |||
|TSSclassifier=not | |||
|UniProt=Q5DSZ5,O60656 | |||
|association_with_transcript=208bp_to_AY435144,CU691312,S55985_5end | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_4_at_UGT1A9_5end | |||
|id=chr2:234580789..234580822,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.99e-21;10!UBERON:0007687;6.99e-21;10!UBERON:0003104;9.35e-16;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!9.77e-11!55;UBERON:0005173!9.77e-11!55;UBERON:0002417!1.17e-09!61;UBERON:0000916!1.17e-09!61;UBERON:0002107!1.57e-08!19;UBERON:0006925!1.57e-08!19;UBERON:0008836!1.57e-08!19;UBERON:0008835!1.94e-07!22;UBERON:0003894!1.94e-07!22;UBERON:0005177!3.35e-07!107;UBERON:0009854!3.87e-07!23;UBERON:0009569!8.59e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0005172;1.14e-12;52!UBERON:0005173;1.14e-12;52!UBERON:0002107;1.91e-11;19!UBERON:0006925;1.91e-11;19!UBERON:0002113;2.35e-09;24!UBERON:0011143;2.35e-09;24!UBERON:0002423;5.95e-09;25!UBERON:0000489;6.44e-08;29!UBERON:0006554;1.10e-07;30!UBERON:0001008;1.10e-07;30!UBERON:0002365;1.25e-07;31!UBERON:0002330;1.25e-07;31!UBERON:0002417;3.85e-07;58!UBERON:0000916;3.85e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.70e-15,54;UBERON:0005173,1.70e-15,54;UBERON:0002417,4.87e-14,60;UBERON:0000916,4.87e-14,60;UBERON:0002107,1.91e-11,19;UBERON:0006925,1.91e-11,19;UBERON:0008836,1.91e-11,19;UBERON:0008835,4.96e-10,22;UBERON:0003894,4.96e-10,22;UBERON:0009854,1.22e-09,23;UBERON:0007499,5.95e-09,25;UBERON:0009497,5.95e-09,25;UBERON:0000015,5.95e-09,25;UBERON:0002423,5.95e-09,25;UBERON:0006235,5.95e-09,25;UBERON:0004161,5.95e-09,25;UBERON:0002113,1.03e-08,26;UBERON:0003918,1.03e-08,26;UBERON:0011143,1.03e-08,26;UBERON:0005095,1.03e-08,26;UBERON:0007687,1.03e-08,26;UBERON:0005177,1.11e-08,101;UBERON:0009856,1.20e-08,26;UBERON:0009569,6.64e-08,112;UBERON:0000489,1.80e-07,31;UBERON:0002365,2.05e-07,31;UBERON:0002330,2.05e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06803946203826,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23891386827932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@UGT1A9 | |||
}} |
Revision as of 09:17, 21 January 2014
Short description: | p4@UGT1A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_UGT1A9_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 208bp_to_AY435144, CU691312, S55985_5end |
EntrezGene: | UGT1A9 |
HGNC: | 12541 |
UniProt: | Q5DSZ5O60656 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.70e-15 | 54 |
abdominal segment element | 1.70e-15 | 54 |
abdominal segment of trunk | 4.87e-14 | 60 |
abdomen | 4.87e-14 | 60 |
liver | 1.91e-11 | 19 |
digestive gland | 1.91e-11 | 19 |
liver bud | 1.91e-11 | 19 |
hepatic diverticulum | 4.96e-10 | 22 |
liver primordium | 4.96e-10 | 22 |
digestive tract diverticulum | 1.22e-09 | 23 |
epithelial sac | 5.95e-09 | 25 |
epithelium of foregut-midgut junction | 5.95e-09 | 25 |
anatomical boundary | 5.95e-09 | 25 |
hepatobiliary system | 5.95e-09 | 25 |
foregut-midgut junction | 5.95e-09 | 25 |
septum transversum | 5.95e-09 | 25 |
kidney | 1.03e-08 | 26 |
kidney mesenchyme | 1.03e-08 | 26 |
upper urinary tract | 1.03e-08 | 26 |
kidney rudiment | 1.03e-08 | 26 |
kidney field | 1.03e-08 | 26 |
trunk region element | 1.11e-08 | 101 |
sac | 1.20e-08 | 26 |
subdivision of trunk | 6.64e-08 | 112 |
cavitated compound organ | 1.80e-07 | 31 |
exocrine gland | 2.05e-07 | 31 |
exocrine system | 2.05e-07 | 31 |