FFCP PHASE1:Hg19::chr20:17691468..17691474,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_at_chr20:17691468..17691474,- | |||
|id=chr20:17691468..17691474,- | |||
|ontology_enrichment_celltype=CL:0002563!8.59e-14!4;CL:0000181!5.07e-10!12;CL:0000417!5.07e-10!12;CL:0000668!5.07e-10!12;CL:0000414!5.07e-10!12;CL:0000412!5.07e-10!12;CL:0000182!5.07e-10!12;CL:0000223!7.00e-10!59;CL:0002253!1.05e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.35e-66;4!CL:0002253;5.04e-34;2!CL:0002231;3.27e-23;3!CL:0002076;8.67e-16;42!CL:0002251;2.58e-14;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.35e-66,4;CL:0002253,7.05e-34,2;CL:0002231,3.27e-23,3;CL:0002076,3.52e-15,42;CL:0002251,2.58e-14,20;CL:0000223,2.67e-11,58 | |||
|ontology_enrichment_development_v019=CL:0000223;2.51e-07;58 | |||
|ontology_enrichment_disease=DOID:4929!2.25e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!8.59e-14!4;UBERON:0001262!8.59e-14!4;UBERON:0004786!8.59e-14!4;UBERON:0004808!8.59e-14!4;UBERON:0001277!8.59e-14!4;UBERON:0003350!3.20e-11!5;UBERON:0000160!3.52e-11!27;UBERON:0005409!1.12e-08!35;UBERON:0003929!4.03e-08!54;UBERON:0002108!5.00e-08!14;UBERON:0000949!6.94e-07!45;UBERON:0004921!8.50e-07!129;UBERON:0004185!8.50e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;3.35e-66;4!UBERON:0001262;3.35e-66;4!UBERON:0004786;3.35e-66;4!UBERON:0004808;3.35e-66;4!UBERON:0001277;3.35e-66;4!UBERON:0000485;1.80e-38;7!UBERON:0003929;1.80e-38;7!UBERON:0003350;7.68e-34;8!UBERON:0001052;8.69e-18;4!UBERON:0000160;9.05e-16;17!UBERON:0004907;1.60e-14;5!UBERON:0000344;2.58e-14;20!UBERON:0005409;1.33e-12;22!UBERON:0004921;2.79e-09;33!UBERON:0001155;1.12e-08;9!UBERON:0005911;1.25e-08;36!UBERON:0000490;1.25e-08;33!UBERON:0002367;2.47e-07;11!UBERON:0010147;2.47e-07;11!UBERON:0000059;2.47e-07;11!UBERON:0003937;7.92e-07;12!UBERON:0005399;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.35e-66,4;UBERON:0001262,3.35e-66,4;UBERON:0004786,3.35e-66,4;UBERON:0004808,3.35e-66,4;UBERON:0001277,3.35e-66,4;UBERON:0003350,7.68e-34,8;UBERON:0000485,3.09e-30,9;UBERON:0001052,1.03e-17,4;UBERON:0000160,9.05e-16,17;UBERON:0001046,5.66e-15,19;UBERON:0004907,1.83e-14,5;UBERON:0000344,2.58e-14,20;UBERON:0003929,4.68e-12,54;UBERON:0005409,2.77e-11,25;UBERON:0001155,1.21e-08,9;UBERON:0005911,2.70e-08,82;UBERON:0002367,2.47e-07,11;UBERON:0010147,2.47e-07,11;UBERON:0009846,2.47e-07,11;UBERON:0003353,2.47e-07,11;UBERON:0004902,2.47e-07,11;UBERON:0003820,2.47e-07,11;UBERON:0009847,2.47e-07,11;UBERON:0000059,2.63e-07,11;UBERON:0003937,7.92e-07,12;UBERON:0005399,7.92e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.494495150286999,0.337017719270924,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr20:17691468..17691474,- | |||
}} |
Revision as of 10:22, 21 January 2014
Short description: | p@chr20:17691468..17691474, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:17691468..17691474, - |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.35e-66 | 4 |
epithelial cell of large intestine | 7.05e-34 | 2 |
epithelial cell of prostate | 3.27e-23 | 3 |
endo-epithelial cell | 3.52e-15 | 42 |
epithelial cell of alimentary canal | 2.58e-14 | 20 |
endodermal cell | 2.67e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 3.35e-66 | 4 |
wall of intestine | 3.35e-66 | 4 |
gastrointestinal system mucosa | 3.35e-66 | 4 |
gastrointestinal system epithelium | 3.35e-66 | 4 |
intestinal epithelium | 3.35e-66 | 4 |
epithelium of mucosa | 7.68e-34 | 8 |
simple columnar epithelium | 3.09e-30 | 9 |
rectum | 1.03e-17 | 4 |
intestine | 9.05e-16 | 17 |
hindgut | 5.66e-15 | 19 |
lower digestive tract | 1.83e-14 | 5 |
mucosa | 2.58e-14 | 20 |
gut epithelium | 4.68e-12 | 54 |
gastrointestinal system | 2.77e-11 | 25 |
colon | 1.21e-08 | 9 |
endo-epithelium | 2.70e-08 | 82 |
prostate gland | 2.47e-07 | 11 |
male accessory sex gland | 2.47e-07 | 11 |
embryonic cloacal epithelium | 2.47e-07 | 11 |
epithelium of hindgut | 2.47e-07 | 11 |
urogenital sinus epithelium | 2.47e-07 | 11 |
prostate bud | 2.47e-07 | 11 |
prostate field | 2.47e-07 | 11 |
large intestine | 2.63e-07 | 11 |
sex gland | 7.92e-07 | 12 |
male reproductive gland | 7.92e-07 | 12 |