FFCP PHASE1:Hg19::chr20:55091890..55091904,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16100 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-338bp_to_ENST00000481560_5end | |||
|description=CAGE_peak_2_at_FAM209A_5end | |||
|id=chr20:55091890..55091904,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.10e-16!10;CL:0000541!2.10e-16!10;CL:0002567!1.51e-11!3;CL:0000147!2.17e-11!14;CL:0000710!1.24e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0002567;7.36e-31;3!CL:0000148;3.84e-25;10!CL:0000147;5.92e-18;14!CL:0000710;1.52e-12;20!CL:0002566;8.62e-12;1!CL:0000075;2.92e-09;27!CL:0002077;9.53e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,6.02e-31,3;CL:0000148,3.15e-25,10;CL:0000541,3.15e-25,10;CL:0000147,5.14e-18,14;CL:0000710,1.38e-12,20;CL:0002566,8.62e-12,1;CL:0000075,2.73e-09,27;CL:0002077,2.41e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.61e-14;3!UBERON:0003057;1.61e-14;3!UBERON:0006601;1.19e-07;82 | |||
|ontology_enrichment_disease=DOID:1909!2.34e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.97e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.53e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.23e-72!57;UBERON:0005068!6.23e-72!57;UBERON:0006241!6.23e-72!57;UBERON:0007135!6.23e-72!57;UBERON:0002616!1.88e-57!59;UBERON:0003075!8.99e-53!86;UBERON:0007284!8.99e-53!86;UBERON:0001017!2.75e-52!82;UBERON:0005743!3.87e-52!86;UBERON:0000955!3.67e-50!69;UBERON:0006238!3.67e-50!69;UBERON:0002346!5.38e-50!90;UBERON:0002780!5.03e-49!41;UBERON:0001890!5.03e-49!41;UBERON:0006240!5.03e-49!41;UBERON:0003080!1.03e-47!42;UBERON:0002020!1.08e-46!34;UBERON:0003528!1.08e-46!34;UBERON:0001893!2.02e-46!34;UBERON:0000073!2.46e-46!94;UBERON:0001016!2.46e-46!94;UBERON:0007023!5.85e-44!115;UBERON:0002791!7.17e-44!33;UBERON:0001869!6.16e-41!32;UBERON:0003056!2.33e-33!61;UBERON:0000033!1.80e-29!123;UBERON:0004121!3.62e-29!169;UBERON:0002308!1.37e-28!9;UBERON:0000125!1.37e-28!9;UBERON:0000924!2.99e-28!173;UBERON:0006601!2.99e-28!173;UBERON:0000153!1.14e-27!129;UBERON:0007811!1.14e-27!129;UBERON:0003076!7.97e-25!15;UBERON:0003057!7.97e-25!15;UBERON:0002619!1.08e-23!22;UBERON:0000956!1.24e-23!25;UBERON:0000203!1.24e-23!25;UBERON:0001950!1.31e-22!20;UBERON:0009663!1.74e-22!7;UBERON:0002420!2.46e-22!9;UBERON:0007245!2.46e-22!9;UBERON:0010009!2.46e-22!9;UBERON:0010011!2.46e-22!9;UBERON:0000454!2.46e-22!9;UBERON:0002298!2.25e-20!8;UBERON:0000025!7.01e-18!194;UBERON:0004733!1.88e-16!12;UBERON:0002028!1.88e-16!12;UBERON:0007277!1.88e-16!12;UBERON:0004732!4.46e-15!13;UBERON:0004111!2.28e-13!241;UBERON:0000369!3.85e-13!4;UBERON:0002435!3.85e-13!4;UBERON:0000204!3.85e-13!4;UBERON:0010082!3.85e-13!4;UBERON:0000483!4.75e-13!309;UBERON:0000119!8.12e-13!312;UBERON:0000064!1.96e-12!219;UBERON:0002240!4.34e-11!3;UBERON:0001896!4.49e-11!3;UBERON:0005290!4.49e-11!3;UBERON:0010096!4.49e-11!3;UBERON:0006331!4.64e-11!3;UBERON:0000988!7.17e-11!3;UBERON:0002021!9.08e-11!5;UBERON:0000477!1.86e-10!286;UBERON:0005383!4.16e-10!3;UBERON:0005382!4.16e-10!3;UBERON:0002680!8.86e-09!9;UBERON:0001895!8.86e-09!9;UBERON:0010092!8.86e-09!9;UBERON:0000475!1.46e-08!365;UBERON:0000200!2.07e-08!6;UBERON:0001897!3.94e-08!2;UBERON:0001875!7.77e-08!2;UBERON:0006514!7.77e-08!2;UBERON:0002148!8.31e-08!2;UBERON:0009662!8.31e-08!2;UBERON:0001873!1.72e-07!2;UBERON:0010122!1.72e-07!2;UBERON:0005174!8.59e-07!5;UBERON:0001137!8.59e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;6.10e-30;3!UBERON:0005290;6.10e-30;3!UBERON:0002298;2.42e-26;6!UBERON:0001897;6.36e-21;2!UBERON:0010225;6.36e-21;2!UBERON:0002240;1.61e-14;3!UBERON:0005174;1.61e-14;3!UBERON:0001137;1.61e-14;3!UBERON:0004733;2.52e-13;12!UBERON:0002028;2.52e-13;12!UBERON:0004732;2.55e-12;13!UBERON:0002038;3.63e-11;1!UBERON:0009661;3.63e-11;1!UBERON:0002950;3.63e-11;1!UBERON:0001891;3.63e-11;1!UBERON:0002784;6.01e-11;4!UBERON:0000125;2.12e-10;9!UBERON:0002308;2.12e-10;9!UBERON:0000073;6.00e-09;53!UBERON:0002616;6.00e-09;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.50e-29,3;UBERON:0005290,1.50e-29,3;UBERON:0010096,1.50e-29,3;UBERON:0002298,3.37e-26,6;UBERON:0003076,2.87e-23,15;UBERON:0003057,2.87e-23,15;UBERON:0001897,7.05e-21,2;UBERON:0010225,7.05e-21,2;UBERON:0001049,2.70e-19,56;UBERON:0005068,2.70e-19,56;UBERON:0006241,2.70e-19,56;UBERON:0007135,2.70e-19,56;UBERON:0002240,1.73e-14,3;UBERON:0005174,1.73e-14,3;UBERON:0001137,1.73e-14,3;UBERON:0010371,5.72e-14,104;UBERON:0000073,1.55e-13,53;UBERON:0002616,1.55e-13,53;UBERON:0004733,2.96e-13,12;UBERON:0002028,2.96e-13,12;UBERON:0007277,2.96e-13,12;UBERON:0001017,9.45e-13,81;UBERON:0003075,9.45e-13,82;UBERON:0007284,9.45e-13,82;UBERON:0004732,2.97e-12,13;UBERON:0002346,4.33e-12,86;UBERON:0002038,2.18e-11,1;UBERON:0009661,2.18e-11,1;UBERON:0002950,2.18e-11,1;UBERON:0001891,2.18e-11,1;UBERON:0009616,2.18e-11,1;UBERON:0010286,2.18e-11,1;UBERON:0001016,2.41e-11,89;UBERON:0002784,6.33e-11,4;UBERON:0000125,1.74e-10,9;UBERON:0002308,1.74e-10,9;UBERON:0000955,3.57e-10,68;UBERON:0006238,3.57e-10,68;UBERON:0007023,7.72e-09,114;UBERON:0004121,1.28e-07,171;UBERON:0000924,1.28e-07,171;UBERON:0006601,1.28e-07,171;UBERON:0010314,2.43e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.76270941231933,2.29193055334967,5.86087236050235,1.71072446022705,0.411309970813294,0.901029173531752,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.67401132980677,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.821432273351958,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,1.14681839138014,1.33114861844223,1.1177352529449,0,0,3.94287705608284,2.85465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0.834979926253974,1.41696576325585,0.798169295285756,0.82046545696302,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.413373593002368,0.697573912132975,0,0,0,0,0,0,0,0,0,0,0,0,0.883606528698812,0.394636641377094,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4794432940146,0.485710993059139,0,0,0,0.11294608203896,0,0,0,0,0,0,0,2.55201007249429,2.0793248022896,0.4226557275834,0,0,0,0,0,0,0,0,0,1.72007499781742,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,1.24119595034274,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@FAM209A | |||
}} |
Revision as of 12:21, 21 January 2014
Short description: | p2@FAM209A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM209A_5end |
Coexpression cluster: | NA |
Association with transcript: | -338bp_to_ENST00000481560_5end |
EntrezGene: | FAM209A |
HGNC: | 16100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 6.02e-31 | 3 |
melanocyte | 3.15e-25 | 10 |
melanoblast | 3.15e-25 | 10 |
pigment cell | 5.14e-18 | 14 |
neurecto-epithelial cell | 1.38e-12 | 20 |
dark melanocyte | 8.62e-12 | 1 |
columnar/cuboidal epithelial cell | 2.73e-09 | 27 |
ecto-epithelial cell | 2.41e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.53e-21 | 2 |