FFCP PHASE1:Hg19::chr22:42739839..42739867,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6942 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=-217bp_to_ENST00000515426_5end | |||
|description=CAGE_peak_20_at_TCF20_5end | |||
|id=chr22:42739839..42739867,- | |||
|ontology_enrichment_celltype=CL:0002319!6.89e-09!25;CL:0000133!5.67e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.18e-10;5!CL:0000540;1.08e-07;6!CL:0000404;1.08e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.53e-10,8;CL:0002322,4.68e-10,5;CL:0000540,9.25e-08,6;CL:0000031,9.25e-08,6;CL:0000404,9.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.58e-09;82!CL:0000031;1.08e-07;6 | |||
|ontology_enrichment_disease=DOID:0050687!4.59e-14!143;DOID:305!4.14e-10!106;DOID:162!2.12e-07!235;DOID:3095!6.73e-07!22;DOID:2994!6.73e-07!22;DOID:14566!9.06e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.56e-08;22!DOID:2994;9.56e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.04e-07,22;DOID:2994,1.04e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.77e-29!94;UBERON:0001016!6.77e-29!94;UBERON:0001017!4.05e-28!82;UBERON:0005743!1.43e-26!86;UBERON:0000924!9.10e-24!173;UBERON:0006601!9.10e-24!173;UBERON:0001049!3.80e-23!57;UBERON:0005068!3.80e-23!57;UBERON:0006241!3.80e-23!57;UBERON:0007135!3.80e-23!57;UBERON:0004121!6.24e-22!169;UBERON:0000955!9.59e-22!69;UBERON:0006238!9.59e-22!69;UBERON:0002346!5.94e-21!90;UBERON:0003080!1.28e-20!42;UBERON:0002780!4.70e-20!41;UBERON:0001890!4.70e-20!41;UBERON:0006240!4.70e-20!41;UBERON:0003075!5.71e-19!86;UBERON:0007284!5.71e-19!86;UBERON:0002616!2.62e-18!59;UBERON:0000153!4.47e-18!129;UBERON:0007811!4.47e-18!129;UBERON:0000033!5.43e-18!123;UBERON:0007023!5.49e-17!115;UBERON:0003056!3.51e-16!61;UBERON:0001893!8.66e-16!34;UBERON:0002020!2.31e-15!34;UBERON:0003528!2.31e-15!34;UBERON:0002791!3.80e-15!33;UBERON:0001869!1.76e-14!32;UBERON:0000956!1.75e-10!25;UBERON:0000203!1.75e-10!25;UBERON:0001950!1.24e-09!20;UBERON:0002619!1.85e-09!22;UBERON:0000064!7.07e-07!219;UBERON:0000475!9.80e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.82e-24;41!UBERON:0001890;3.82e-24;41!UBERON:0001893;6.02e-21;34!UBERON:0003528;9.12e-21;34!UBERON:0002020;9.12e-21;34!UBERON:0001869;6.76e-20;32!UBERON:0002791;1.06e-19;32!UBERON:0000073;4.15e-19;53!UBERON:0002616;4.15e-19;53!UBERON:0002619;2.47e-18;22!UBERON:0001950;6.57e-18;20!UBERON:0000956;1.21e-15;25!UBERON:0000203;1.21e-15;25!UBERON:0000955;1.45e-14;68!UBERON:0001016;5.50e-13;83!UBERON:0001017;9.27e-13;75!UBERON:0000125;4.04e-11;9!UBERON:0002308;4.04e-11;9!UBERON:0002420;6.37e-09;9!UBERON:0007245;6.37e-09;9!UBERON:0010009;6.37e-09;9!UBERON:0010011;6.37e-09;9!UBERON:0000454;6.37e-09;9!UBERON:0001894;9.40e-09;7!UBERON:0009663;1.23e-08;7!UBERON:0001872;1.78e-08;5!UBERON:0000369;9.60e-08;4!UBERON:0002435;9.60e-08;4!UBERON:0000204;9.60e-08;4!UBERON:0003296;1.68e-07;4!UBERON:0010133;1.68e-07;4!UBERON:0007023;3.99e-07;114!UBERON:0002784;5.41e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.32e-38,89;UBERON:0001017,3.21e-38,81;UBERON:0002780,1.38e-33,41;UBERON:0001890,1.38e-33,41;UBERON:0003080,1.38e-33,41;UBERON:0006240,1.38e-33,41;UBERON:0000073,8.26e-33,53;UBERON:0002616,8.26e-33,53;UBERON:0000955,1.89e-31,68;UBERON:0006238,1.89e-31,68;UBERON:0001049,1.78e-30,56;UBERON:0005068,1.78e-30,56;UBERON:0006241,1.78e-30,56;UBERON:0007135,1.78e-30,56;UBERON:0001893,4.26e-26,34;UBERON:0003056,4.42e-26,61;UBERON:0002346,1.59e-25,86;UBERON:0003528,3.07e-25,34;UBERON:0002020,3.07e-25,34;UBERON:0001869,3.03e-23,32;UBERON:0002791,3.73e-23,32;UBERON:0003075,8.24e-23,82;UBERON:0007284,8.24e-23,82;UBERON:0004121,4.53e-20,171;UBERON:0000924,4.53e-20,171;UBERON:0006601,4.53e-20,171;UBERON:0002619,3.76e-19,22;UBERON:0007023,7.70e-19,114;UBERON:0010371,8.40e-19,104;UBERON:0001950,1.08e-18,20;UBERON:0000956,2.37e-16,25;UBERON:0000203,2.37e-16,25;UBERON:0011216,1.57e-14,223;UBERON:0010314,8.24e-11,132;UBERON:0000125,9.44e-11,9;UBERON:0002308,9.44e-11,9;UBERON:0001872,4.08e-09,5;UBERON:0001894,4.54e-09,7;UBERON:0006222,4.54e-09,7;UBERON:0002420,5.50e-09,9;UBERON:0007245,5.50e-09,9;UBERON:0010009,5.50e-09,9;UBERON:0010011,5.50e-09,9;UBERON:0000454,5.50e-09,9;UBERON:0009663,1.25e-08,7;UBERON:0003296,8.75e-08,4;UBERON:0010133,8.75e-08,4;UBERON:0000369,1.04e-07,4;UBERON:0002435,1.04e-07,4;UBERON:0000204,1.04e-07,4;UBERON:0010082,1.04e-07,4;UBERON:0002784,2.48e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.492484232307152,0.204000691244253,0.313454721478088,0.572471974262113,0.958120975510189,0.753255837568817,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.786021525498329,0.616804496998528,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0.444859689486181,1.07016331235885,1.04535523804977,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,1.24930726552346,0.710331756132051,0,0.604820229674197,0.267440195783507,0.289648807765598,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.567208902984407,0.221729397462564,0.527008714158756,0.261958150995425,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.352303495931295,0.161872944368132,0.421352420106746,0,0.245668634623536,0.103325781175765,0,0,0,0,0.505008341862199,0.625592599359821,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0.717558542755448,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0.252433774244115,0.184099797284599,0.161646056818812,0.710019185033229,0,0,0.193260853163297,0,0,4.02513230227665,3.5783037446801,2.32387885739037,2.48786532036889,2.52320850875628,4.74470566798579,0,0.643240938192885,0,0,0,0.709840800239063,0.337169380156203,0.964044119533928,0.55146986366197,0.435758888184812,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0.860919069801795,0,0.109750285408626,0,0.201057944823262,0.185176890317059,0.325808305310325,0,0,0.34779121492523,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0,0.207328115540772,0,0,0.317489471460845,0,1.17217447210047,0,0.205654985406647,0,0.285826432630578,0.224262168690721,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0,1.27047312111232,2.60279707715243,5.41302168944387,3.35032530668698,2.55175500661265,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,1.20859449591622,0,0,0.114814448164607,0.364182336013434,0,0,0,2.35304930753057,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.457847324091717,1.07262349896764,0,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0.290033387828457,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.709522128141196,0.211107635297664,0.329294892959902,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.854592569019785,0,0.735120647943095,0.743212700502875,0,1.9919716137556,1.11598390910176,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,1.42068073403207,0,0.593929361665277,0,0,2.95405774462077,0,0,1.68900326502395,0.19924798825107,0,2.01546198283421,0.306806047506464,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0.969332746095218,1.39152147242777,1.99613798001194,0,0.0874599999961957,1.44999915086959,0.455173793141999,0,0.709163045303809,0,0.874813840149763,2.77799991893268,2.65722415744152,2.29133233388275,0,0.442317039724898,1.18219047581419,1.31631238292384,0.10893846351899,0.278847488557207,1.53900517007594,0.113942055847001,0.69169171316418,0,0.54323685961004,0,0.0915975934018623,0.533034776018635,2.04386596391473,0,0,0.225595660617181,0,0.335643173951685,0,0,0.421996129056054,0,0.424059214301822,1.94749775767882,2.98578579323551,0.530745387020035,0,0.296521128680622,0.494255755786011,0,3.50485891499521,0,0.937057782901357,0,0.586993856796269,0.485560759068186,1.57833761139756,0,8.87611008728421,0.442306057399416,0.60129367765797,0.829505531177977,0.664653872707185,0.330991955875499,0.941798755221676,1.19472429772959,0.284609546029793,0.138674673013139,0,0.391969589657511,0,0.34945333648406,0.51595809741485,0.290268993867255,0.0730893170861856,0.164230914106418,0.290967049465258,1.3238419003725,0.677942222341597,0.274083849293502,0,1.89932387867636,0.195551382734803,0.721429382263803,0,0,0.576361668616424,0.229073192331831,2.9171149636534,0.14405479798815,0.99402028452346,0.942776138467182,0.271808412147228,0.523014231561666,1.52997326454483,0,1.20084057741958,0.958337652243951,1.27746588066972,0,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0,0.268733889946905,0.360299883542404,0,0,0.082415858381166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| |||
|short_description=p20@TCF20 | |||
}} |
Revision as of 16:21, 21 January 2014
Short description: | p20@TCF20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_TCF20_5end |
Coexpression cluster: | NA |
Association with transcript: | -217bp_to_ENST00000515426_5end |
EntrezGene: | TCF20 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.53e-10 | 8 |
embryonic stem cell | 4.68e-10 | 5 |
neuron | 9.25e-08 | 6 |
neuroblast | 9.25e-08 | 6 |
electrically signaling cell | 9.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.04e-07 | 22 |
germ cell cancer | 1.04e-07 | 22 |