FFCP PHASE1:Hg19::chr3:31099711..31099712,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1160 | |||
|description=CAGE_peak_at_chr3:31099711..31099712,- | |||
|id=chr3:31099711..31099712,- | |||
|ontology_enrichment_celltype=CL:0002057!7.55e-16!42;CL:0000860!2.73e-14!45;CL:0000839!4.57e-14!70;CL:0000557!6.56e-13!71;CL:0002009!9.24e-13!65;CL:0002194!3.35e-12!63;CL:0000576!3.35e-12!63;CL:0000040!3.35e-12!63;CL:0000559!3.35e-12!63;CL:0000766!2.92e-11!76;CL:0000763!2.77e-10!112;CL:0000049!2.77e-10!112;CL:0002031!4.40e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.47e-15;6!CL:0002539;8.35e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.75e-15,6;CL:0002539,7.99e-10,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.81e-10!80;UBERON:0001474!5.69e-10!86;UBERON:0001737!1.48e-09!9;UBERON:0004765!7.80e-08!101;UBERON:0001434!7.80e-08!101;UBERON:0002405!4.54e-07!115;UBERON:0002390!5.28e-07!102;UBERON:0003061!5.28e-07!102;UBERON:0002193!5.74e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;8.62e-12;1!UBERON:0000026;8.62e-12;1!UBERON:0008784;8.62e-12;1!UBERON:0006058;8.62e-12;1!UBERON:0003663;8.62e-12;1!UBERON:0004256;8.62e-12;1!UBERON:0004708;8.62e-12;1!UBERON:0002101;8.62e-12;1!UBERON:0004709;8.62e-12;1!UBERON:0002529;8.62e-12;1!UBERON:0010538;8.62e-12;1!UBERON:0003661;8.62e-12;1!UBERON:0010890;8.62e-12;1!UBERON:0002471;8.62e-12;1!UBERON:0001383;8.62e-12;1!UBERON:0010758;8.62e-12;1!UBERON:0010707;8.62e-12;1!UBERON:0000978;8.62e-12;1!UBERON:0002103;8.62e-12;1!UBERON:0001665;8.62e-12;1!UBERON:0003823;8.62e-12;1!UBERON:0000154;8.62e-12;1!UBERON:0010709;8.62e-12;1!UBERON:0004237;8.35e-10;10!UBERON:0004695;8.35e-10;10!UBERON:0002111;8.35e-10;10!UBERON:0004178;8.35e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,8.62e-12,1;UBERON:0001389,8.62e-12,1;UBERON:0000026,8.62e-12,1;UBERON:0008784,8.62e-12,1;UBERON:0006058,8.62e-12,1;UBERON:0003663,8.62e-12,1;UBERON:0004256,8.62e-12,1;UBERON:0004708,8.62e-12,1;UBERON:0002101,8.62e-12,1;UBERON:0004709,8.62e-12,1;UBERON:0002529,8.62e-12,1;UBERON:0010538,8.62e-12,1;UBERON:0003661,8.62e-12,1;UBERON:0010890,8.62e-12,1;UBERON:0002471,8.62e-12,1;UBERON:0001383,8.62e-12,1;UBERON:0004357,8.62e-12,1;UBERON:0004347,8.62e-12,1;UBERON:0005420,8.62e-12,1;UBERON:0005732,8.62e-12,1;UBERON:0010758,8.62e-12,1;UBERON:0010707,8.62e-12,1;UBERON:0000978,8.62e-12,1;UBERON:0002103,8.62e-12,1;UBERON:0001665,8.62e-12,1;UBERON:0003823,8.62e-12,1;UBERON:0000154,8.62e-12,1;UBERON:0010709,8.62e-12,1;UBERON:0005733,8.62e-12,1;UBERON:0005730,8.62e-12,1;UBERON:0004237,7.99e-10,10;UBERON:0004695,7.99e-10,10;UBERON:0002111,7.99e-10,10;UBERON:0004178,7.99e-10,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,4.82155622419182,5.11217063271161,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.752969358170419,0.818718450173537,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0,1.16083695451434,0,0,0.502497330513487,2.08593167368081,0.217188844705117,0,0,0,0,0.637812899895131,0.209658645508376,0.336985893439485,0.450530678524519,0,0,0.79566670879636,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.501559486172034,0,0,0,0.334231370655521,0.883817722424512,0.664601683750863,0.541607727530031,0.512365278902701,0,0.328875809207352,0,0.579606171470105,0.444859689486181,0.535081656179426,0,0.226618685395132,0,0,1.01207876807801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.723033089650446,0.220587945464788,0.217879444092406,0.237270619111097,0,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.352193736052904,0.207328115540772,0,0,0,0,0,0,0,0.901029173531752,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0.199579371432817,0,0,0.324621940274555,0,0,0,5.01268954180134,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0.0824158583811665,0,0,0,1.59045937961861,0,0.643012593860077,0,0,1.1248694577575,0,0.0607495566580247,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,1.24411862352257,0,0,0,0.380805212168795,0,0,0,0,1.19428766609585,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12431239445539,0,0.0634158101939068,0.546974809018219,0,0,0,0,0.535701835878287,0,1.21393120847326,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0.31020638566432,0,0.111855431797792,0,0,9.71143255781842,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,1.65833887891756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:31099711..31099712,- | |||
}} |
Revision as of 18:01, 21 January 2014
Short description: | p@chr3:31099711..31099712, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:31099711..31099712, - |
Coexpression cluster: | C1160_skeletal_acute_Monocytederived_hippocampus_medulla_optic_Aortic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.75e-15 | 6 |
aortic smooth muscle cell | 7.99e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 8.62e-12 | 1 |
soleus muscle | 8.62e-12 | 1 |
appendage | 8.62e-12 | 1 |
lower limb segment | 8.62e-12 | 1 |
multi-limb segment region | 8.62e-12 | 1 |
hindlimb muscle | 8.62e-12 | 1 |
hindlimb zeugopod muscle | 8.62e-12 | 1 |
paired limb/fin | 8.62e-12 | 1 |
limb | 8.62e-12 | 1 |
pelvic appendage | 8.62e-12 | 1 |
limb segment | 8.62e-12 | 1 |
paired limb/fin segment | 8.62e-12 | 1 |
limb muscle | 8.62e-12 | 1 |
pelvic complex muscle | 8.62e-12 | 1 |
zeugopod | 8.62e-12 | 1 |
muscle of leg | 8.62e-12 | 1 |
paired limb/fin bud | 8.62e-12 | 1 |
limb bud | 8.62e-12 | 1 |
pelvic appendage bud | 8.62e-12 | 1 |
limb/fin field | 8.62e-12 | 1 |
subdivision of organism along appendicular axis | 8.62e-12 | 1 |
appendage girdle complex | 8.62e-12 | 1 |
leg | 8.62e-12 | 1 |
hindlimb | 8.62e-12 | 1 |
triceps surae | 8.62e-12 | 1 |
hindlimb zeugopod | 8.62e-12 | 1 |
posterior region of body | 8.62e-12 | 1 |
pelvic complex | 8.62e-12 | 1 |
limb field | 8.62e-12 | 1 |
hindlimb/pelvic fin field | 8.62e-12 | 1 |
blood vessel smooth muscle | 7.99e-10 | 10 |
arterial system smooth muscle | 7.99e-10 | 10 |
artery smooth muscle tissue | 7.99e-10 | 10 |
aorta smooth muscle tissue | 7.99e-10 | 10 |