FFCP PHASE1:Hg19::chr3:98700113..98700136,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=211bp_to_ENST00000473756_5end | |||
|coexpression_cluster_id=C1081 | |||
|description=CAGE_peak_4_at_ENST00000473756_5end | |||
|id=chr3:98700113..98700136,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.75e-15!679;CL:0000004!4.75e-15!679;CL:0000255!4.75e-15!679;CL:0000680!5.52e-15!57;CL:0000056!5.52e-15!57;CL:0000355!5.52e-15!57;CL:0000183!6.62e-15!59;CL:0000012!1.05e-14!682;CL:0000359!1.08e-14!32;CL:0000220!1.92e-14!246;CL:0000187!3.87e-14!54;CL:0002321!4.33e-14!248;CL:0000192!4.05e-13!42;CL:0000514!4.05e-13!42;CL:0000144!5.22e-12!625;CL:0000393!1.53e-11!60;CL:0000211!1.53e-11!60;CL:0002371!1.78e-11!591;CL:0000003!7.53e-11!722;CL:0000222!1.96e-10!119;CL:0000055!3.33e-10!180;CL:0002539!3.50e-09!10;CL:0000066!7.21e-09!254;CL:1000507!1.05e-08!12;CL:1000494!1.05e-08!12;CL:1000497!2.15e-08!18;CL:0002518!2.15e-08!18;CL:1000449!6.52e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;4.63e-18;10!CL:1000494;4.63e-18;10!CL:1000497;5.87e-16;17!CL:0002518;5.87e-16;17!CL:1000449;2.41e-13;15!CL:0002539;3.85e-10;10!CL:0002681;9.00e-09;12!CL:0002584;9.00e-09;12!CL:0000306;1.39e-07;4!CL:0002222;1.39e-07;4!CL:0002224;1.39e-07;4!CL:0000359;4.31e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.24e-18,10;CL:1000494,3.24e-18,10;CL:1000497,4.25e-16,17;CL:0002518,4.25e-16,17;CL:1000449,2.31e-13,15;CL:0002539,5.19e-10,10;CL:0000066,1.43e-09,253;CL:0002681,9.30e-09,12;CL:0002584,9.30e-09,12;CL:0000306,9.80e-08,4;CL:0002222,9.80e-08,4;CL:0002224,9.80e-08,4;CL:0000359,2.80e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!4.42e-11!27;DOID:193!7.16e-11!29;DOID:2394!1.85e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:120;8.85e-11;27!DOID:193;8.86e-10;29!DOID:0060072;1.46e-08;4!DOID:2394;3.60e-08;14!DOID:0060084;8.69e-07;3!DOID:127;8.69e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:120,5.82e-11,27;DOID:193,6.03e-10,29;DOID:0060072,1.73e-08,4;DOID:2394,2.50e-08,14;DOID:0060084,9.78e-07,3;DOID:127,9.78e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.73e-17!82;UBERON:0005256!1.83e-16!143;UBERON:0004290!1.95e-15!70;UBERON:0000914!3.25e-14!83;UBERON:0002329!3.25e-14!83;UBERON:0003077!3.25e-14!83;UBERON:0003059!3.25e-14!83;UBERON:0007282!3.25e-14!83;UBERON:0009618!3.25e-14!83;UBERON:0007285!3.25e-14!83;UBERON:0001134!3.64e-13!61;UBERON:0002036!3.64e-13!61;UBERON:0003082!3.64e-13!61;UBERON:0002385!2.36e-12!63;UBERON:0001015!2.36e-12!63;UBERON:0000383!2.36e-12!63;UBERON:0002100!2.82e-10!216;UBERON:0000483!3.34e-09!309;UBERON:0000119!3.39e-09!312;UBERON:0004237!3.50e-09!10;UBERON:0004695!3.50e-09!10;UBERON:0002111!3.50e-09!10;UBERON:0004178!3.50e-09!10;UBERON:0003104!1.04e-08!238;UBERON:0009142!1.04e-08!238;UBERON:0009773!1.05e-08!12;UBERON:0001231!1.05e-08!12;UBERON:0004810!1.05e-08!12;UBERON:0007625!2.59e-08!11;UBERON:0000490!6.04e-08!138;UBERON:0001637!6.70e-08!42;UBERON:0003509!6.70e-08!42;UBERON:0004572!6.70e-08!42;UBERON:0004573!1.19e-07!33;UBERON:0004571!1.19e-07!33;UBERON:0003914!1.20e-07!118;UBERON:0001135!2.62e-07!15;UBERON:0003100!3.73e-07!41;UBERON:0000475!5.80e-07!365;UBERON:0000481!6.11e-07!347;UBERON:0004211!6.52e-07!16;UBERON:0001285!6.52e-07!16;UBERON:0007684!6.52e-07!16;UBERON:0003220!6.52e-07!16;UBERON:0004208!6.52e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.63e-18;10!UBERON:0009773;4.63e-18;10!UBERON:0001231;4.63e-18;10!UBERON:0004810;4.63e-18;10!UBERON:0006555;2.41e-13;15!UBERON:0004819;2.41e-13;15!UBERON:0001285;2.41e-13;15!UBERON:0007684;2.41e-13;15!UBERON:0006554;1.48e-10;30!UBERON:0001008;1.48e-10;30!UBERON:0002113;2.70e-10;24!UBERON:0011143;2.70e-10;24!UBERON:0004237;3.85e-10;10!UBERON:0004695;3.85e-10;10!UBERON:0002111;3.85e-10;10!UBERON:0004178;3.85e-10;10!UBERON:0007625;1.07e-09;11!UBERON:0001225;9.00e-09;12!UBERON:0008987;9.00e-09;12!UBERON:0000353;1.93e-08;15!UBERON:0000488;4.89e-08;4!UBERON:0000489;5.83e-08;29!UBERON:0010077;1.39e-07;4!UBERON:0005389;1.39e-07;4!UBERON:0000484;1.39e-07;4!UBERON:0000965;1.39e-07;4!UBERON:0001803;1.39e-07;4!UBERON:0003134;1.73e-07;33!UBERON:0003100;2.21e-07;41!UBERON:0001801;2.80e-07;14!UBERON:0010371;6.68e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.24e-18,10;UBERON:0004211,2.31e-13,15;UBERON:0009773,2.31e-13,15;UBERON:0001231,2.31e-13,15;UBERON:0001285,2.31e-13,15;UBERON:0007684,2.31e-13,15;UBERON:0004208,2.31e-13,15;UBERON:0006555,2.37e-12,16;UBERON:0004819,2.37e-12,16;UBERON:0000076,1.94e-10,8;UBERON:0004237,5.19e-10,10;UBERON:0004695,5.19e-10,10;UBERON:0002111,5.19e-10,10;UBERON:0004178,5.19e-10,10;UBERON:0007625,8.91e-10,11;UBERON:0003100,1.98e-09,41;UBERON:0002113,2.47e-09,26;UBERON:0003918,2.47e-09,26;UBERON:0011143,2.47e-09,26;UBERON:0005095,2.47e-09,26;UBERON:0007687,2.47e-09,26;UBERON:0001225,9.30e-09,12;UBERON:0008987,9.30e-09,12;UBERON:0003914,1.71e-08,117;UBERON:0000353,1.90e-08,15;UBERON:0000488,5.39e-08,4;UBERON:0010077,9.80e-08,4;UBERON:0005389,9.80e-08,4;UBERON:0000484,9.80e-08,4;UBERON:0002546,9.80e-08,4;UBERON:0000965,9.80e-08,4;UBERON:0001803,9.80e-08,4;UBERON:0003073,9.80e-08,4;UBERON:0005426,9.80e-08,4;UBERON:0001801,2.45e-07,14;UBERON:0000486,2.57e-07,83;UBERON:0000489,2.59e-07,31;UBERON:0003134,3.42e-07,37;UBERON:0000474,3.42e-07,37;UBERON:0003104,3.57e-07,160;UBERON:0009142,3.57e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0.491467873003018,0,0,0,0,0,1.34465029290355,3.01347264011988,1.46062018077475,0.975865597581014,0.369363174230364,0.612002073732759,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86115866417221,4.43458794925128,3.07421749925941,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,10.5927344650575,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0.624320153660641,0.570471821544449,0.597794722207204,1.29177948508141,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0.554128230968366,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,2.51239109112286,4.63668405004419,2.00763216772303,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,3.08822058537346,2.74375713521564,0,0,0.185176890317059,0,0,2.88662684050547,4.05756417412769,1.6437217193015,0,0,0.380508304469197,0,0,0,0,0,0.93733833986777,14.9504094096985,3.68615252830205,3.04498977189684,3.19697332365358,1.91691339582606,31.0377839874444,5.28290604079356,0.207328115540772,0.144119953416961,0,0,0.381988425558278,0,0,0,0,0,0,0,0.36669142910475,0.775630294546667,0,2.535908257668,0,0,0.514414748524284,0,0,0,0,0,4.88604276440603,0,0,1.80863626235752,1.74306691720059,1.09970290300263,0,0,0,0.239624855491583,0,8.5582143024431,2.75084482668401,0,2.32779252211864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771048469013278,0.887808626565635,0.98552587216571,1.03850885836724,0.929683027679674,0,3.80962293576241,0,0.574072240823034,0.364182336013434,0.131124414959424,6.31679458070376,26.8013373123363,3.92174884588428,7.30696123266303,35.0431407924347,0,0,1.0795795805107,0,5.68987518842091,2.50844886927427,4.07802036872061,1.66215201785745,3.58199607555485,0,0,0.512900250232778,0,0.325378394664303,0,0,0,0,0.650060246036521,0,0.96670718292122,0.462145851343933,0.15350367472613,1.51620229732984,0.322260734604821,0,0.681813019328807,0,1.65284915360978,0.192190067365106,0.127612712494584,0,4.64845549297286,5.03699754929024,3.485186350803,0.616067160352178,1.06461206063404,2.60979897622522,2.03856641014312,1.00187420719394,0.372158369359667,0.949138274156178,0,0,0,0.95460974377781,0,0.539617372749944,0,0.471249609382746,1.2130948894399,0,0.842516912477962,0,0.487426979262569,0,0.545999645631943,0,0,0.551365343546124,1.32687795048244,0.876901770507525,0,0,5.0727594240676,0.6196469961995,0.563391205064483,0.286822704408103,0.196498082026242,7.49009208110625,6.74046021734136,0,0,0,0,0.0962221127255121,1.34060455107157,0,0,3.44404298136984,0,0.443430153536676,9.41865940848534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,6.6866030566487,2.27308917445131,0,0,0,0,0,14.0248968328861,0,0,0,0,0,0.20453736500431,0,0,10.8740704888265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,8.65092064564911,5.06021705293358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.941798755221676,0,1.13843818411917,0.554698692052555,0,0,0.174118413160805,0,0,0,0,0,0,0,0,3.01492234222852,6.16015296279268,0,0,20.119863883135,0,0,0,0,0,12.1006030310046,14.4132941255902,0,6.11568927331263,6.38077362505233,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28001682597032,0,0.383830394638891,0,0,0,3.25799761052228,6.04955043840887,9.14444608306346,5.98650957812437,0.082092520749339,1.19271615249795,0.113312091520126,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.468607378872,0,0,1.64180283175561,0.233713309847224,1.10961172300523,1.51522404220071,1.50940741051545,0.889811221596536,1.37304041038154,0,1.24349760466224,0.591420599958536,0.63718706865481,1.34940933649081,0.931577741257556,1.24411862352257,4.51930914748591,6.26094074174081,0.300515217994437,1.52322084867518,0.406870733204662,2.72772988803839,1.61115835563733,1.85613503951397,1.59238355479446,4.00027764663154,0.343395705182793,0,0,0.770479321629213,0,0,0,0.694567422971502,0.244736704506468,0,0,0,0.353378291891762,0.192914038270915,1.18259708457151,1.53744911152768,0,0.607719912354764,0,0,0,0,0,0.491545817507439,6.76198794747607,0,0,0,2.27006381426734,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462102664601353,0.762764190934334,0.690359926060101,0,0,18.1534561833168,0,0,0,56.3331688486942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37190407549935,0,0,0,0.5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| |||
|short_description=p4@ENST00000473756 | |||
}} |
Revision as of 20:08, 21 January 2014
Short description: | p4@ENST00000473756 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000473756_5end |
Coexpression cluster: | C1081_papillotubular_Renal_Mast_giant_meningioma_mucinous_gall |
Association with transcript: | 211bp_to_ENST00000473756_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.24e-18 | 10 |
nephron tubule epithelial cell | 3.24e-18 | 10 |
kidney cell | 4.25e-16 | 17 |
kidney epithelial cell | 4.25e-16 | 17 |
epithelial cell of nephron | 2.31e-13 | 15 |
aortic smooth muscle cell | 5.19e-10 | 10 |
epithelial cell | 1.43e-09 | 253 |
kidney cortical cell | 9.30e-09 | 12 |
renal cortical epithelial cell | 9.30e-09 | 12 |
crystallin accumulating cell | 9.80e-08 | 4 |
vertebrate lens cell | 9.80e-08 | 4 |
lens epithelial cell | 9.80e-08 | 4 |
vascular associated smooth muscle cell | 2.80e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 5.82e-11 | 27 |
reproductive organ cancer | 6.03e-10 | 29 |
benign neoplasm | 1.73e-08 | 4 |
ovarian cancer | 2.50e-08 | 14 |
cell type benign neoplasm | 9.78e-07 | 3 |
leiomyoma | 9.78e-07 | 3 |