FFCP PHASE1:Hg19::chr3:159481673..159481683,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:159481673..159481683,- | |||
|id=chr3:159481673..159481683,- | |||
|ontology_enrichment_celltype=CL:0000012!4.25e-13!682;CL:0000222!2.67e-12!119;CL:0000213!4.60e-12!57;CL:0000215!4.60e-12!57;CL:0000144!6.78e-12!625;CL:0000548!9.29e-12!679;CL:0000004!9.29e-12!679;CL:0000255!9.29e-12!679;CL:0000115!1.01e-10!35;CL:0002139!2.01e-10!24;CL:0002321!3.16e-10!248;CL:0000220!4.70e-10!246;CL:0002078!3.69e-09!44;CL:0000076!1.65e-08!62;CL:0000071!1.81e-08!18;CL:0002546!1.81e-08!18;CL:0000003!2.20e-08!722;CL:0002371!2.20e-08!591 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.99e-10;36!CL:1000746;2.54e-09;7!CL:1000612;2.54e-09;7!CL:0002139;7.47e-09;24!CL:0000071;7.78e-09;18!CL:0000213;7.77e-08;58!CL:0000215;7.77e-08;58!CL:0002078;6.01e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.91e-13,36;CL:0000213,2.78e-12,58;CL:0000215,2.78e-12,58;CL:0002078,1.78e-10,45;CL:0000071,3.01e-09,18;CL:0002546,3.01e-09,18;CL:0002139,3.15e-09,24;CL:1000746,3.49e-09,7;CL:1000612,3.49e-09,7;CL:0000222,5.21e-08,121;CL:0000076,8.19e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;7.78e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.29e-10!69;UBERON:0002049!1.73e-10!79;UBERON:0007798!1.73e-10!79;UBERON:0001981!6.57e-10!60;UBERON:0007500!6.57e-10!60;UBERON:0004537!6.57e-10!60;UBERON:0006965!6.57e-10!60;UBERON:0004872!1.86e-09!84;UBERON:0001986!1.81e-08!18;UBERON:0004638!1.81e-08!18;UBERON:0004852!1.81e-08!18;UBERON:0000926!3.41e-08!448;UBERON:0004120!3.41e-08!448;UBERON:0006603!3.41e-08!448;UBERON:0000480!3.88e-08!626;UBERON:0000467!4.11e-08!625;UBERON:0000487!4.14e-08!22;UBERON:0003914!6.56e-08!118;UBERON:0003081!8.01e-08!216;UBERON:0004535!1.49e-07!110;UBERON:0001009!2.36e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.54e-09;7!UBERON:0001229;2.54e-09;7!UBERON:0004638;7.78e-09;18!UBERON:0001986;7.78e-09;18!UBERON:0004852;7.78e-09;18!UBERON:0000487;2.72e-08;22!UBERON:0006914;5.30e-07;25!UBERON:0000353;6.44e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,6.08e-10,203;UBERON:0004638,3.01e-09,18;UBERON:0001986,3.01e-09,18;UBERON:0004852,3.01e-09,18;UBERON:0010532,3.49e-09,7;UBERON:0000074,3.49e-09,7;UBERON:0001229,3.49e-09,7;UBERON:0001230,3.49e-09,7;UBERON:0003220,3.49e-09,7;UBERON:0005749,3.49e-09,7;UBERON:0004199,3.49e-09,7;UBERON:0004209,3.49e-09,7;UBERON:0004198,3.49e-09,7;UBERON:0000487,9.54e-09,22;UBERON:0004872,1.34e-08,83;UBERON:0007500,5.96e-08,59;UBERON:0001981,5.96e-08,59;UBERON:0004537,5.96e-08,59;UBERON:0006965,5.96e-08,59;UBERON:0005103,6.21e-08,8;UBERON:0000083,6.21e-08,8;UBERON:0009201,6.21e-08,8;UBERON:0006553,6.21e-08,8;UBERON:0003074,6.21e-08,8;UBERON:0003060,6.21e-08,8;UBERON:0000055,6.58e-08,68;UBERON:0004876,1.55e-07,11;UBERON:0000926,1.67e-07,315;UBERON:0004120,1.67e-07,315;UBERON:0006603,1.67e-07,315;UBERON:0006914,2.17e-07,25;UBERON:0000080,5.80e-07,9;UBERON:0002120,5.80e-07,9;UBERON:0004875,5.80e-07,9;UBERON:0005721,5.80e-07,9;UBERON:0005754,5.80e-07,9;UBERON:0007297,5.80e-07,9;UBERON:0000353,7.25e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0.436882744260345,0.527533956456907,1.11389717664042,0.994192127183747,0.672325146451775,0.602694528023977,0,0,0.123121058076788,1.02000345622126,0.313454721478088,0.286235987131057,0.684372125364421,0.627713197974014,0,0,0,2.75354993794233,0.383829398097213,0.928896739896456,0.919421224478927,0.30120591877825,0.739508020333575,0,0,2.05520307534393,1.66198622559563,0.802177789880567,0.651032612147555,0,0,0,0.145398238779565,0,0.727752183563449,0.464858073811369,0.411167888021826,0.619412741790207,1.43846196161075,0.512321413058201,0.945928919554341,0.344745680736619,0,0,1.12945403725563,0.272906150057846,0.898893937780338,0.306083892370903,0.641858054152187,1.27867425159808,0.659702600373432,0.398927315243264,0,0,0,0,1.25624332628372,0,0.434377689410233,0.605399502633369,0.368277635987565,0.316462387440884,1.69004229049553,1.4882300997553,1.04829322754188,3.25753030324836,1.20141514273205,1.44653028027372,1.14005097496499,0.99458338599545,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,7.93027971474155,2.24203425192614,1.31692042387539,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0.283604451492204,0,0.263504357079378,0.130979075497713,0.364295288292542,0,0,0,0,1.43094374583205,1.14398982156026,0,0.79504962946682,0.860234595106124,0.347140501607594,1.13061588384802,2.51699661725944,1.37559020970034,1.67195973229448,0.516833518338658,1.06729878806013,1.67360306382335,0.402829317109147,3.04108842287405,1.22031028774085,0.367663080345869,1.62028389576352,0.625098097988558,0.898117490504679,0.337834441449967,1.53316637465883,6.6448596169769,1.83201743930407,0,0,0,0,0.25326102332916,0.529636723252875,1.14734648299525,0,0.560677600142307,0,0.98667019366864,0,0.67355336034844,0,0.605429710579726,0.576175924479999,0,0,1.1409436430889,0,0.23486899728753,0.161872944368132,0.702254033511242,0.204154171254893,0.122834317311768,0.309977343527296,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0.877955241761676,1.22595118319608,0.45071417671979,0.226864366320042,1.4351170855109,0.85422955527427,0.211931901159562,0,0.206105058476878,4.12224864073007,0.18611685633159,0.506328996723799,0.389748020644795,1.51460264546469,0.736399189138395,0.323292113637624,0.710019185033229,0.806016785821122,0.169560592310488,0.57978255948989,0.545492241181669,0,0.731842236777572,0.132529768321485,0,0.207322110030741,0.252320850875628,0,0,1.28648187638577,4.14404764057442,0,0,0.236613600079688,0.168584690078102,0,0.772057809126758,0,0,0.404493924480493,0.196221465125346,0,2.21446636387394,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0,0.368965315629341,0,0,1.1240175325762,0.100528972411631,0.185176890317059,0,1.03993478527958,1.44331342025273,0.115930404975077,0.117408694235822,0.866198686566443,0.462985512576611,0.761016608938393,0,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0.381988425558278,1.17217447210047,0,0.308482478109971,0,0,0.336393253036082,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0.285955987316295,0,0,0.325736184293735,0,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0,0,0.479249710983165,0,1.42636905040718,0,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.468565659970853,0,0,0,0,2.02806085395873,0.521301686808497,0.587403472388222,0.686286847621712,0.620304078368662,2.80428461064202,0.640365346820666,1.21251028578504,3.32870879020994,1.20956117331872,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,2.96836132889982,0.154209693802656,0.355123450626254,0.246381468041427,0,0.116210378459959,0.362578348774867,0.200506470303285,0,0.34444334449382,0,0.131124414959424,0,0.385076685522074,0,2.92278449306521,0.316654886678627,1.13733384070897,1.02056223165909,0.431831832204279,4.62681758070868,1.35473218771926,1.50506932156456,0,0.831076008928724,0.671624264166535,0,0,0,0.328014645699706,0,0.412164046590889,0.824125183365091,0.660075999364704,0,0,1.6068392984416,0.193341436584244,0.462145851343933,0.307007349452259,0.689182862422653,0,0,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0.638063562472921,0,0,0.31481234683064,0.6970372701606,0,0,0,0.37064843820784,0.429374660225974,0,0.949138274156178,0.762520775695299,0.767693373934002,0.42793898803392,0.318203247925937,3.13979456079692,0.719489830333259,0.54907405947211,0.471249609382746,0.202182481573316,3.17020642346017,1.26377536871694,1.46290121726877,0.487426979262569,1.05650146756755,0.136499911407986,0.565621727814851,0,1.65409603063837,0.66343897524122,0.876901770507525,0,0.6558947520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| |||
|short_description=p@chr3:159481673..159481683,- | |||
}} |
Revision as of 22:20, 21 January 2014
Short description: | p@chr3:159481673..159481683, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:159481673..159481683, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.91e-13 | 36 |
lining cell | 2.78e-12 | 58 |
barrier cell | 2.78e-12 | 58 |
meso-epithelial cell | 1.78e-10 | 45 |
blood vessel endothelial cell | 3.01e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.01e-09 | 18 |
endothelial cell of vascular tree | 3.15e-09 | 24 |
glomerular cell | 3.49e-09 | 7 |
kidney corpuscule cell | 3.49e-09 | 7 |
mesodermal cell | 5.21e-08 | 121 |
squamous epithelial cell | 8.19e-07 | 63 |