FFCP PHASE1:Hg19::chr4:30722075..30722084,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8659 | |||
|TSSclassifier=strong | |||
|UniProt=O60245,F5GWJ1 | |||
|association_with_transcript=38bp_to_ENST00000361762,NM_001173523,NM_002589,NM_032457,uc003gsk.1,uc011bxw.1,uc011bxx.1_5end | |||
|description=CAGE_peak_5_at_PCDH7_5end | |||
|id=chr4:30722075..30722084,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000342;1.15e-09;1!CL:0002565;1.15e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,1.15e-09,1;CL:0002565,1.15e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;4.07e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!1.40e-16!20;UBERON:0007023!1.65e-16!115;UBERON:0002619!5.88e-16!22;UBERON:0002346!1.61e-15!90;UBERON:0003075!3.05e-14!86;UBERON:0007284!3.05e-14!86;UBERON:0000956!2.64e-13!25;UBERON:0000203!2.64e-13!25;UBERON:0002020!7.06e-13!34;UBERON:0003528!7.06e-13!34;UBERON:0001869!7.91e-13!32;UBERON:0001049!8.21e-13!57;UBERON:0005068!8.21e-13!57;UBERON:0006241!8.21e-13!57;UBERON:0007135!8.21e-13!57;UBERON:0001893!1.14e-12!34;UBERON:0003056!1.46e-12!61;UBERON:0000064!4.88e-12!219;UBERON:0002791!6.44e-12!33;UBERON:0002780!5.26e-11!41;UBERON:0001890!5.26e-11!41;UBERON:0006240!5.26e-11!41;UBERON:0003080!1.47e-10!42;UBERON:0005743!3.22e-10!86;UBERON:0000955!1.86e-09!69;UBERON:0006238!1.86e-09!69;UBERON:0000924!2.71e-09!173;UBERON:0006601!2.71e-09!173;UBERON:0002616!2.97e-09!59;UBERON:0000922!3.82e-09!612;UBERON:0000468!4.56e-09!659;UBERON:0001017!4.78e-09!82;UBERON:0000073!1.11e-08!94;UBERON:0001016!1.11e-08!94;UBERON:0004121!2.11e-08!169;UBERON:0000923!6.79e-08!604;UBERON:0005291!6.79e-08!604;UBERON:0006598!6.79e-08!604;UBERON:0002532!6.79e-08!604;UBERON:0000033!7.12e-08!123;UBERON:0002050!8.18e-08!605;UBERON:0005423!8.18e-08!605;UBERON:0001737!1.13e-07!9;UBERON:0000153!2.25e-07!129;UBERON:0007811!2.25e-07!129;UBERON:0000062!3.41e-07!511;UBERON:0000200!3.87e-07!6;UBERON:0000467!5.53e-07!625;UBERON:0000480!6.59e-07!626;UBERON:0000481!9.23e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.49e-15;5!UBERON:0001950;6.49e-14;20!UBERON:0002619;1.15e-12;22!UBERON:0006947;2.39e-12;3!UBERON:0004054;2.39e-12;3!UBERON:0001871;1.87e-11;6!UBERON:0000956;3.76e-11;25!UBERON:0000203;3.76e-11;25!UBERON:0000998;4.07e-10;1!UBERON:0006868;4.07e-10;1!UBERON:0004175;7.28e-10;21!UBERON:0002902;1.15e-09;1!UBERON:0001000;1.15e-09;1!UBERON:0000996;1.15e-09;1!UBERON:0002146;1.15e-09;1!UBERON:0005623;1.15e-09;1!UBERON:0009899;1.15e-09;1!UBERON:0002506;1.15e-09;1!UBERON:0005352;1.15e-09;1!UBERON:0001769;1.15e-09;1!UBERON:0005904;1.76e-09;4!UBERON:0000488;2.90e-09;4!UBERON:0002791;1.49e-08;32!UBERON:0001869;1.49e-08;32!UBERON:0001893;3.28e-08;34!UBERON:0003528;6.80e-07;34!UBERON:0002020;6.80e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.57e-15,5;UBERON:0001950,9.00e-14,20;UBERON:0006947,1.36e-12,3;UBERON:0004054,1.36e-12,3;UBERON:0002619,1.55e-12,22;UBERON:0001871,2.97e-11,6;UBERON:0000956,4.88e-11,25;UBERON:0000203,4.88e-11,25;UBERON:0003075,2.73e-10,82;UBERON:0007284,2.73e-10,82;UBERON:0000998,3.74e-10,1;UBERON:0006868,3.74e-10,1;UBERON:0001000,5.31e-10,1;UBERON:0005352,5.31e-10,1;UBERON:0002346,9.82e-10,86;UBERON:0002506,1.15e-09,1;UBERON:0001769,1.15e-09,1;UBERON:0005904,1.15e-09,4;UBERON:0000996,1.25e-09,1;UBERON:0002146,1.91e-09,1;UBERON:0005623,1.91e-09,1;UBERON:0002902,2.26e-09,1;UBERON:0009899,2.26e-09,1;UBERON:0000488,2.46e-09,4;UBERON:0002791,1.35e-08,32;UBERON:0001869,1.35e-08,32;UBERON:0001049,2.63e-08,56;UBERON:0005068,2.63e-08,56;UBERON:0006241,2.63e-08,56;UBERON:0007135,2.63e-08,56;UBERON:0004175,2.96e-08,25;UBERON:0003528,4.45e-08,34;UBERON:0002020,4.45e-08,34;UBERON:0001893,4.45e-08,34;UBERON:0010371,9.28e-08,104;UBERON:0003056,1.55e-07,61;UBERON:0001017,7.64e-07,81;UBERON:0000073,8.16e-07,53;UBERON:0002616,8.16e-07,53 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50602959389125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.886917589850256,1.49319135678314,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,1.72101972449288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0.860413786167011,0,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.505754070234305,1.44606617930089,0.55146986366197,0.435758888184812,1.42362371466658,0.943819157121151,0.392442930250692,0,0,0,0,0,0,0,0,0,0.614942192715568,1.3725424823882,0.109750285408626,0,0.603173834469785,0.277765335475589,0,0,0,0,0.821860859650752,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0,0.246381468041427,0,0,0.241718899183244,0.40101294060657,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0.325378394664303,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0.623224249527161,0,0.384380134730212,0.893288987462089,0.30347334256665,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.649376687132959,1.99613798001194,0,0,0,0.227586896570999,0,0.472775363535873,0,0,0,0,0,0,0,0,0.219385397153973,0,0.278847488557207,0.307801034015188,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,1.97292201424695,2.41981432097328,0.30607276163049,0,0.450970258243478,0.518440956986236,0,0,0,0,0,1.10939738410511,0,0,0.261177619741208,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.246346371159628,0.678923115418936,0,0.225980740780532,0,0,0.696418755514666,0,0.0801588202515337,0.213452994739353,0.799238438328521,0,0,0,0,0,0.235694034616795,0,0.313808538937,0,0,0.600420288709789,0,0,0,0,0,1.14580212005842,0,0.399358000997982,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.607495566580247,0.335434687599266,0.0788057072991982,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0.864221491201268,1.30634944043764,0,0,0,0,0,0,0.775697738169303,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.22026264901963,0.250381861413,0,0.332787154610557,0.434674820589684,0,0.37494122388632,0.151649117541648,0,0,0,0,0.298509605773748,0,0,0.189403005275089,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0.829412415681711,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0.553033744606923,0,0,0,0,0.737318726261158,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0.509197589862076,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.319267718114302,1.64093091392604,0.252071696221718,1.10651603942749,0.322951291263702,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0,0.163771917510097,0.147856086217045,0.540300676947157,0.781078098613847,0.413373593002368,0.824405532520789,0,0,0.992422356778588,0,1.66091155931474,0,0,0,0,0,0,0,2.10706172228178,0.789273282754189,0,0,0.549451649953598,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0.521574816907738,0,0,0,0,0,0,0,2.54032230114557,0.68732060563215,0,0,0,0,0.853425474875886,0,0,1.1598144313382,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0.735444965261716,0,0.196308467114945,0.594092800654172,1.2679671827502,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0.315543124386369,1.01987235286372,0,0,0.371995018166751,0,0,0,0,1.0135880080915,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0.2868888215707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| |||
|short_description=p5@PCDH7 | |||
}} |
Revision as of 00:37, 22 January 2014
Short description: | p5@PCDH7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PCDH7_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENST00000361762, NM_001173523, NM_002589, NM_032457, uc003gsk.1, uc011bxw.1, uc011bxx.1_5end |
EntrezGene: | PCDH7 |
HGNC: | 8659 |
UniProt: | O60245F5GWJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 1.15e-09 | 1 |
iris pigment epithelial cell | 1.15e-09 | 1 |