FFCP PHASE1:Hg19::chr5:180415839..180415851,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=10917 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1143 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UXE8 | |||
|association_with_transcript=0bp_to_ENST00000342868,NM_197975_5end | |||
|coexpression_cluster_id=C124 | |||
|description=CAGE_peak_2_at_BTNL3_5end | |||
|id=chr5:180415839..180415851,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.68e-16!4;CL:0002253!8.74e-09!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;6.40e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.79e-53!27;UBERON:0000059!2.68e-49!11;UBERON:0001155!4.60e-42!9;UBERON:0005409!1.90e-41!35;UBERON:0004907!9.22e-28!5;UBERON:0001154!1.65e-16!1;UBERON:0001153!1.65e-16!1;UBERON:0007029!2.25e-16!1;UBERON:0001052!4.51e-16!4;UBERON:0001242!5.68e-16!4;UBERON:0001262!5.68e-16!4;UBERON:0004786!5.68e-16!4;UBERON:0004808!5.68e-16!4;UBERON:0001277!5.68e-16!4;UBERON:0003350!5.60e-13!5;UBERON:0004921!7.35e-11!129;UBERON:0004185!7.35e-11!129;UBERON:0002108!5.49e-10!14;UBERON:0001007!6.98e-09!155;UBERON:0001555!6.98e-09!155;UBERON:0007026!6.98e-09!155;UBERON:0004119!4.59e-08!169;UBERON:0000925!4.59e-08!169;UBERON:0006595!4.59e-08!169;UBERON:0001046!9.00e-08!19;UBERON:0000485!1.29e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.70e-77;17!UBERON:0005409;1.55e-60;22!UBERON:0000059;1.89e-49;11!UBERON:0002108;1.49e-40;4!UBERON:0001155;5.32e-39;9!UBERON:0004921;6.03e-38;33!UBERON:0001154;6.40e-23;1!UBERON:0001153;6.40e-23;1!UBERON:0009854;6.40e-23;1!UBERON:0004907;2.30e-18;5!UBERON:0001555;1.97e-15;54!UBERON:0001007;5.48e-11;81!UBERON:0002114;1.04e-08;2!UBERON:0000922;2.33e-08;49!UBERON:0001052;9.11e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.70e-77,17;UBERON:0005409,1.44e-53,25;UBERON:0000059,1.89e-49,11;UBERON:0002108,1.49e-40,4;UBERON:0001155,5.32e-39,9;UBERON:0001154,6.40e-23,1;UBERON:0001153,6.40e-23,1;UBERON:0001045,6.40e-23,1;UBERON:0004907,2.30e-18,5;UBERON:0004921,1.22e-11,118;UBERON:0001007,1.94e-09,145;UBERON:0001555,1.94e-09,145;UBERON:0007026,1.94e-09,145;UBERON:0002114,1.04e-08,2;UBERON:0004119,1.57e-08,160;UBERON:0000925,1.57e-08,160;UBERON:0006595,1.57e-08,160;UBERON:0011216,1.33e-07,223;UBERON:0001052,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,2.98578579323551,19.9914095777547,11.6095727537389,0,0,0,0,0,0,0,0,0,0,35.0873076541125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.39211104356647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,42.6001352755855,109.716899372987,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,28.5674493878316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@BTNL3 | |||
}} |
Revision as of 09:32, 22 January 2014
Short description: | p2@BTNL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_2_at_BTNL3_5end |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | 0bp_to_ENST00000342868, NM_197975_5end |
EntrezGene: | BTNL3 |
HGNC: | 1143 |
UniProt: | Q6UXE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.70e-77 | 17 |
gastrointestinal system | 1.44e-53 | 25 |
large intestine | 1.89e-49 | 11 |
small intestine | 1.49e-40 | 4 |
colon | 5.32e-39 | 9 |
vermiform appendix | 6.40e-23 | 1 |
caecum | 6.40e-23 | 1 |
midgut | 6.40e-23 | 1 |
lower digestive tract | 2.30e-18 | 5 |
subdivision of digestive tract | 1.22e-11 | 118 |
digestive system | 1.94e-09 | 145 |
digestive tract | 1.94e-09 | 145 |
primitive gut | 1.94e-09 | 145 |
duodenum | 1.04e-08 | 2 |
endoderm-derived structure | 1.57e-08 | 160 |
endoderm | 1.57e-08 | 160 |
presumptive endoderm | 1.57e-08 | 160 |
organ system subdivision | 1.33e-07 | 223 |
rectum | 9.11e-07 | 4 |