FFCP PHASE1:Hg19::chr6:35464729..35464738,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7005 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11716 | |||
|TSSclassifier=strong | |||
|UniProt=B5MCM0 | |||
|association_with_transcript=-2bp_to_ENST00000402886_5end | |||
|description=CAGE_peak_3_at_TEAD3_5end | |||
|id=chr6:35464729..35464738,- | |||
|ontology_enrichment_celltype=CL:0000055!1.28e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.43e-14;5!CL:0000669;4.62e-11;4!CL:0000650;3.40e-10;2!CL:1000500;3.40e-10;2!CL:1000618;3.40e-10;2!CL:1001318;3.40e-10;2!CL:0002173;3.40e-10;2!CL:0002363;1.22e-09;2!CL:0002321;5.28e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.90e-14,5;CL:0000669,3.27e-11,4;CL:0000650,1.68e-10,2;CL:1000500,1.68e-10,2;CL:1000618,1.68e-10,2;CL:1001318,1.68e-10,2;CL:0002173,1.68e-10,2;CL:0002363,1.98e-09,2;CL:0000008,1.98e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000008;1.22e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!6.22e-09!347;UBERON:0002100!5.80e-08!216;UBERON:0000468!1.06e-07!659;UBERON:0003104!3.09e-07!238;UBERON:0009142!3.09e-07!238;UBERON:0004119!7.64e-07!169;UBERON:0000925!7.64e-07!169;UBERON:0006595!7.64e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;4.19e-18;4!UBERON:0003567;3.40e-10;2!UBERON:0003838;3.40e-10;2!UBERON:0003586;3.40e-10;2!UBERON:0005169;3.40e-10;2!UBERON:0002321;3.40e-10;2!UBERON:0005215;3.40e-10;2!UBERON:0002303;3.40e-10;2!UBERON:0002319;3.40e-10;2!UBERON:0005406;4.46e-10;2!UBERON:0003566;1.22e-09;2!UBERON:0001777;1.22e-09;2!UBERON:0004907;7.30e-09;5!UBERON:0010313;4.40e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003891,3.48e-18,4;UBERON:0003567,1.68e-10,2;UBERON:0003838,1.68e-10,2;UBERON:0003586,1.68e-10,2;UBERON:0005169,1.68e-10,2;UBERON:0002321,1.68e-10,2;UBERON:0005215,1.68e-10,2;UBERON:0002303,1.68e-10,2;UBERON:0002319,1.68e-10,2;UBERON:0005406,2.43e-10,2;UBERON:0003566,1.98e-09,2;UBERON:0001777,1.98e-09,2;UBERON:0004907,6.18e-09,5;UBERON:0003104,2.50e-07,160;UBERON:0009142,2.50e-07,160;UBERON:0010313,5.30e-07,10;UBERON:0002342,5.30e-07,10;UBERON:0005062,5.30e-07,10 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,2.61701557230111,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0.286235987131057,0.410623275218653,1.00434111675842,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,0,0.50133791063589,0.434539556882471,0,0,0.189069634328136,0.221729397462564,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0,0,0.709336764396714,2.24271040056923,0,0.24666754841716,0,0,0,0.605429710579726,0,0,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0.280901613404497,0,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,0.919463387397059,0.600952235626387,0.226864366320042,0,0,0,0,0,0,0,0,0.292311015483596,0,0.184099797284599,0.323292113637624,0.355009592516614,0.403008392910561,0.169560592310488,0,0,0,1.09776335516636,1.19276791489337,0.464775771478074,1.96956004529204,1.26160425437814,0.72995471815166,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0.614942192715568,0,0.219500570817251,0,0,0,1.3032332212413,1.03993478527958,0,0.34779121492523,0.469634776943287,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,2.12750493267896,0,0.257207374262142,1.41849132023278,0.266422179016099,0.285955987316295,0.542621605391443,1.64648067356154,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.358121926479791,0,0,0,0,0.254094624222463,2.60279707715243,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0.813795071099207,0.415941723061614,0.535286966391485,0.157702415033935,0.35142424497814,0.601892199455438,0,0,0,0.737476674166813,0.173767228936166,0.783204629850962,2.05886054286514,0,0,0,0.606255142892519,0,2.11673205330776,0.248107807818777,0.153461973288062,0.561320188866147,0.512556597022804,0.511707249066704,0.965123526861645,1.48418066444991,0.154209693802656,0,0,0,0,0.846016147141356,0.601519410909855,0.0920809889358963,0.34444334449382,0,1.44236856455367,0.902399225814824,0.0770153371044148,1.56869953835371,0,0,0,0,0,0,1.89662506280697,4.01351819083883,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0.457847324091717,0.41254749960294,0,0,0,0.773365746336976,0,0.15350367472613,0,0,0,0.255679882248303,0.445160178233687,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0.94443704049192,1.3940745403212,0.308033580176089,0.532306030317022,1.73986598415015,0.37064843820784,0.143124886741991,0,0,0.190630193923825,1.27948895655667,0.42793898803392,0,0,0.179872457583315,0.823611089208164,0.353437207037059,0,0,0,2.43816869544795,0,0,0.272999822815972,0.989838023675989,1.13008116620243,0,0,0.438450885253763,0,0.655894752046633,0.405820753925408,0.30982349809975,0,0,0.392996164052485,0.35667105148125,0.354761064070598,0.633322905892992,0,0,0.699869440489966,0.192444225451024,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0.890894042497916,0.307160702099232,0,0,0,0.16480387422676,0.422250816255987,0.398495976502139,1.38141957765574,0.251932747854276,0.20453736500431,0,0,0.0898683511473268,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,1.15425387755696,0.113942055847001,0.69169171316418,1.07709173291727,1.08647371922008,0.31900115973192,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,2.12029607150911,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0.242780379534093,0.394584402849391,0,0,0.379119477770928,0.300646838828985,0.207376382794494,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0.193978032976839,0.264768380074501,0.451961481561065,0,0.19871461170299,0,0,0.160317640503067,0.640358984218058,0,0,0,0,0,0.248505071130865,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0.458320848023367,0,0.199679000498991,0.429226048136571,0.446342914883745,0.604651252380536,0,1.16495949527454,0.945398187686684,0.576911008668165,1.01105315781277,0.0984274815147488,0,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0,0,0.315222829196793,2.25554728980492,0,0,0,0,0,0.5085370753095,0.542999601753713,0,0,0,0,0,0.226624183040251,0,1.32506888912221,0,0.13223260174269,0,0,0.427149650270779,0.78602152549833,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.415045904808692,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0.889811221596536,0,0.151230923763239,0.1554372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| |||
|short_description=p3@TEAD3 | |||
}} |
Revision as of 11:34, 22 January 2014
Short description: | p3@TEAD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TEAD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000402886_5end |
EntrezGene: | TEAD3 |
HGNC: | 11716 |
UniProt: | B5MCM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.90e-14 | 5 |
pericyte cell | 3.27e-11 | 4 |
mesangial cell | 1.68e-10 | 2 |
kidney interstitial cell | 1.68e-10 | 2 |
juxtaglomerular complex cell | 1.68e-10 | 2 |
renal interstitial pericyte | 1.68e-10 | 2 |
extraglomerular mesangial cell | 1.68e-10 | 2 |
keratocyte | 1.98e-09 | 2 |
migratory cranial neural crest cell | 1.98e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma | 3.48e-18 | 4 |
abdomen connective tissue | 1.68e-10 | 2 |
abdominal segment connective tissue | 1.68e-10 | 2 |
trunk connective tissue | 1.68e-10 | 2 |
interstitial tissue | 1.68e-10 | 2 |
extraglomerular mesangium | 1.68e-10 | 2 |
kidney interstitium | 1.68e-10 | 2 |
juxtaglomerular apparatus | 1.68e-10 | 2 |
mesangium | 1.68e-10 | 2 |
perirenal fat | 2.43e-10 | 2 |
head connective tissue | 1.98e-09 | 2 |
substantia propria of cornea | 1.98e-09 | 2 |
lower digestive tract | 6.18e-09 | 5 |
mesenchyme | 2.50e-07 | 160 |
entire embryonic mesenchyme | 2.50e-07 | 160 |
neural crest-derived structure | 5.30e-07 | 10 |
neural crest | 5.30e-07 | 10 |
neural fold | 5.30e-07 | 10 |