FFCP PHASE1:Hg19::chr6:78174077..78174094,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:78174077..78174094,- | |||
|id=chr6:78174077..78174094,- | |||
|ontology_enrichment_celltype=CL:0000115!1.37e-25!35;CL:0002139!9.25e-25!24;CL:0000071!8.60e-24!18;CL:0002546!8.60e-24!18;CL:0002078!4.13e-18!44;CL:1000413!5.86e-13!9;CL:0000213!1.35e-12!57;CL:0000215!1.35e-12!57;CL:0002543!3.55e-09!6;CL:0002544!4.68e-09!6;CL:0002551!5.42e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.75e-71;18!CL:0002139;6.63e-66;24!CL:0000115;3.52e-56;36!CL:1000413;2.83e-41;9!CL:0002078;1.23e-33;45!CL:0002543;3.14e-28;6!CL:0002544;1.51e-27;6!CL:0000213;6.51e-26;58!CL:0000215;6.51e-26;58!CL:0002618;5.55e-15;3!CL:0000076;8.61e-11;63!CL:0002545;1.36e-10;2!CL:0002367;2.67e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,8.08e-72,18;CL:0002546,8.08e-72,18;CL:0000115,1.09e-68,36;CL:0002139,3.88e-66,24;CL:0002078,8.64e-54,45;CL:1000413,1.71e-41,9;CL:0000213,1.97e-40,58;CL:0000215,1.97e-40,58;CL:0002543,3.46e-28,6;CL:0002544,9.13e-28,6;CL:0000222,1.15e-19,121;CL:0000076,1.35e-17,63;CL:0002618,5.70e-15,3;CL:0002545,1.21e-10,2;CL:0002367,2.67e-10,2;CL:0002321,7.14e-08,250;CL:0000066,4.84e-07,253;CL:0002144,9.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.75e-71;18!CL:0000222;2.10e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!8.60e-24!18;UBERON:0004638!8.60e-24!18;UBERON:0004852!8.60e-24!18;UBERON:0000477!4.11e-19!286;UBERON:0004111!3.04e-18!241;UBERON:0000487!3.71e-18!22;UBERON:0003075!6.67e-18!86;UBERON:0007284!6.67e-18!86;UBERON:0002049!5.75e-17!79;UBERON:0007798!5.75e-17!79;UBERON:0002616!1.19e-16!59;UBERON:0000119!1.21e-16!312;UBERON:0002346!1.93e-16!90;UBERON:0001049!2.95e-16!57;UBERON:0005068!2.95e-16!57;UBERON:0006241!2.95e-16!57;UBERON:0007135!2.95e-16!57;UBERON:0000483!4.05e-16!309;UBERON:0000025!1.24e-15!194;UBERON:0003056!1.36e-15!61;UBERON:0000033!1.68e-15!123;UBERON:0006914!3.80e-15!25;UBERON:0001017!8.67e-15!82;UBERON:0002020!9.78e-15!34;UBERON:0003528!9.78e-15!34;UBERON:0001893!2.13e-14!34;UBERON:0004121!2.21e-14!169;UBERON:0002780!3.05e-14!41;UBERON:0001890!3.05e-14!41;UBERON:0006240!3.05e-14!41;UBERON:0005743!3.34e-14!86;UBERON:0000955!3.43e-14!69;UBERON:0006238!3.43e-14!69;UBERON:0000153!5.40e-14!129;UBERON:0007811!5.40e-14!129;UBERON:0007023!9.82e-14!115;UBERON:0003080!1.06e-13!42;UBERON:0002791!1.26e-13!33;UBERON:0000924!1.35e-13!173;UBERON:0006601!1.35e-13!173;UBERON:0001869!2.08e-13!32;UBERON:0003915!5.86e-13!9;UBERON:0004700!5.86e-13!9;UBERON:0001917!5.86e-13!9;UBERON:0000055!2.42e-12!69;UBERON:0000073!2.73e-12!94;UBERON:0001016!2.73e-12!94;UBERON:0000468!3.03e-12!659;UBERON:0001638!1.34e-11!9;UBERON:0003920!1.34e-11!9;UBERON:0004582!1.34e-11!9;UBERON:0004535!4.42e-11!110;UBERON:0000922!5.91e-11!612;UBERON:0001009!1.99e-10!113;UBERON:0001981!2.09e-10!60;UBERON:0007500!2.09e-10!60;UBERON:0004537!2.09e-10!60;UBERON:0006965!2.09e-10!60;UBERON:0000467!8.27e-10!625;UBERON:0000480!1.00e-09!626;UBERON:0000475!1.20e-09!365;UBERON:0002619!2.62e-09!22;UBERON:0001950!3.60e-09!20;UBERON:0000923!5.22e-09!604;UBERON:0005291!5.22e-09!604;UBERON:0006598!5.22e-09!604;UBERON:0002532!5.22e-09!604;UBERON:0002050!6.30e-09!605;UBERON:0005423!6.30e-09!605;UBERON:0000956!7.75e-09!25;UBERON:0000203!7.75e-09!25;UBERON:0000064!4.34e-08!219;UBERON:0002308!4.46e-08!9;UBERON:0000125!4.46e-08!9;UBERON:0002420!4.78e-08!9;UBERON:0007245!4.78e-08!9;UBERON:0010009!4.78e-08!9;UBERON:0010011!4.78e-08!9;UBERON:0000454!4.78e-08!9;UBERON:0002066!2.49e-07!5;UBERON:0004872!3.25e-07!84;UBERON:0000481!5.23e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.75e-71;18!UBERON:0001986;1.75e-71;18!UBERON:0004852;1.75e-71;18!UBERON:0000487;9.68e-58;22!UBERON:0006914;2.56e-50;25!UBERON:0000490;6.12e-42;33!UBERON:0003915;2.83e-41;9!UBERON:0004700;2.83e-41;9!UBERON:0001917;2.83e-41;9!UBERON:0001638;1.29e-18;9!UBERON:0003920;1.29e-18;9!UBERON:0004582;1.29e-18;9!UBERON:0007500;7.46e-17;56!UBERON:0001981;7.46e-17;56!UBERON:0004537;7.46e-17;56!UBERON:0000055;1.82e-16;65!UBERON:0002049;4.05e-13;75!UBERON:0007798;4.05e-13;75!UBERON:0003914;5.41e-13;74!UBERON:0001637;1.21e-10;42!UBERON:0003509;1.21e-10;42!UBERON:0004572;1.21e-10;42!UBERON:0005800;1.36e-10;2!UBERON:0001515;1.36e-10;2!UBERON:0005969;2.67e-10;2!UBERON:0003956;2.67e-10;2!UBERON:0000947;7.61e-10;21!UBERON:0010191;7.61e-10;21!UBERON:0000025;1.02e-09;93!UBERON:0002066;3.64e-09;5!UBERON:0010260;1.96e-08;9!UBERON:0001801;8.43e-08;14!UBERON:0001009;1.17e-07;112!UBERON:0005383;2.52e-07;3!UBERON:0005382;2.52e-07;3!UBERON:0004535;3.54e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.08e-72,18;UBERON:0001986,8.08e-72,18;UBERON:0004852,8.08e-72,18;UBERON:0000487,5.16e-58,22;UBERON:0006914,1.47e-50,25;UBERON:0003915,1.71e-41,9;UBERON:0004700,1.71e-41,9;UBERON:0001917,1.71e-41,9;UBERON:0002049,4.27e-31,78;UBERON:0007798,4.27e-31,78;UBERON:0000055,9.59e-28,68;UBERON:0007500,9.52e-27,59;UBERON:0001981,9.52e-27,59;UBERON:0004537,9.52e-27,59;UBERON:0006965,9.52e-27,59;UBERON:0004535,1.48e-20,109;UBERON:0001009,7.55e-20,112;UBERON:0001638,1.38e-18,9;UBERON:0003920,1.38e-18,9;UBERON:0004582,1.38e-18,9;UBERON:0004872,1.26e-17,83;UBERON:0003914,6.79e-14,117;UBERON:0001637,2.92e-11,42;UBERON:0003509,2.92e-11,42;UBERON:0004572,2.92e-11,42;UBERON:0000025,4.61e-11,192;UBERON:0000490,5.45e-11,148;UBERON:0005800,1.21e-10,2;UBERON:0001515,1.21e-10,2;UBERON:0005969,2.67e-10,2;UBERON:0003956,2.67e-10,2;UBERON:0004111,2.93e-10,240;UBERON:0000947,6.72e-10,21;UBERON:0010191,6.72e-10,21;UBERON:0000483,1.10e-09,306;UBERON:0000119,1.61e-09,309;UBERON:0002066,3.70e-09,5;UBERON:0010260,1.70e-08,9;UBERON:0001801,7.60e-08,14;UBERON:0005383,2.81e-07,3;UBERON:0005382,2.81e-07,3;UBERON:0010523,9.35e-07,3;UBERON:0001915,9.35e-07,3;UBERON:0001982,9.35e-07,3 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0.221729397462564,0.702678285545008,0.392937226493138,0,0,0,0,0,0,0,0,1.78886166630035,2.58070378531837,6.2485290289367,4.52246353539208,7.1314904155684,17.0573186002842,10.0317583937669,0,0.35576626268671,0,0.805658634218294,1.52054421143703,1.46437234528902,5.8826092855339,4.86085168729056,4.37568668591991,3.59246996201872,8.89630695818246,6.13266549863533,4.74632829784064,4.21364011039937,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0.490385709340376,0,0,2.10889288650417,0.312160076830321,0.570471821544449,0.597794722207204,0.704606991862589,1.13311061057692,0.561803226808994,0.816616685019573,1.35117749042945,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0.750711119231785,2.77064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0.201057944823262,0.0925884451585296,2.6064664424826,0,1.44331342025273,0,1.40890433082986,0.721832238805369,2.31492756288305,2.28304982681518,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0.514137463516618,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,1.13733384070897,0.850468526382578,0.863663664408557,3.08454505380579,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,1.14378116354295,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,1.8589409885985,0.563391205064483,0.717056761020258,0.785992328104969,0,0,0,0,2.27683904259429,4.89908608342976,0,0,1.08890984861323,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,1.19548792950642,0,0,0,0,0.622079175323615,0,0,0,0.493217028184668,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0,0,5.30624329951795,0,0,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.443175571691151,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0,0,0,0.546746009922222,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.387848869084652,0.79339561045614,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,1.001527445652,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,2.60872530905867,0,0,0.406870733204662,0.181848659202559,0,0,1.19428766609585,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.770750701157514,0,0.638535436228605,0.41023272848151,0.756215088665154,0.829887029570615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,1.65349437200947,0.443910671357348,0,0,0,0,0,0,0,0,0.227662191351298,0.532214220975833,0,0,0.135939465953663,0.328863867814245,0,0,0.235479278551542,4.08500533781605,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980593287015622,0,0,0.297046400327086,0.8453114551668,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0.407948941145488,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.724030971033267,0,0,0,0,0.112131862580613,0,0,0,0,0,0.143444410785353,0,0,0,0,0,2.34640942403454,0,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p@chr6:78174077..78174094,- | |||
}} |
Revision as of 12:46, 22 January 2014
Short description: | p@chr6:78174077..78174094, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:78174077..78174094, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 8.08e-72 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.08e-72 | 18 |
endothelial cell | 1.09e-68 | 36 |
endothelial cell of vascular tree | 3.88e-66 | 24 |
meso-epithelial cell | 8.64e-54 | 45 |
endothelial cell of artery | 1.71e-41 | 9 |
lining cell | 1.97e-40 | 58 |
barrier cell | 1.97e-40 | 58 |
vein endothelial cell | 3.46e-28 | 6 |
aortic endothelial cell | 9.13e-28 | 6 |
mesodermal cell | 1.15e-19 | 121 |
squamous epithelial cell | 1.35e-17 | 63 |
endothelial cell of umbilical vein | 5.70e-15 | 3 |
thoracic aorta endothelial cell | 1.21e-10 | 2 |
trabecular meshwork cell | 2.67e-10 | 2 |
embryonic cell | 7.14e-08 | 250 |
epithelial cell | 4.84e-07 | 253 |
capillary endothelial cell | 9.35e-07 | 3 |