FFCP PHASE1:Hg19::chr7:32110836..32110845,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5137 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8776 | |||
|TSSclassifier=weak | |||
|UniProt=B3KSS6,Q14123,Q8NB10 | |||
|association_with_transcript=134bp_to_NM_001191059,uc003tcn.1_5end | |||
|description=CAGE_peak_9_at_PDE1C_5end | |||
|id=chr7:32110836..32110845,- | |||
|ontology_enrichment_celltype=CL:0000057!5.85e-12!75;CL:0000055!1.56e-08!180;CL:0002620!1.60e-07!23;CL:0002334!5.89e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002579;1.21e-16;3!CL:0000197;9.27e-09;6!CL:0000098;9.27e-09;6!CL:0002167;9.27e-09;6!CL:0002334;2.07e-07;12!CL:0002591;4.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.22e-16,3;CL:0000197,6.56e-09,6;CL:0000098,6.56e-09,6;CL:0002167,6.56e-09,6;CL:0000057,6.68e-08,76;CL:0002334,2.15e-07,12;CL:0002591,4.97e-07,1;CL:0000511,8.75e-07,1;CL:0002625,8.75e-07,1;CL:0000216,8.75e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.93e-08;3!UBERON:0005425;3.03e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3112,7.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.95e-12!34;UBERON:0002791!8.16e-12!33;UBERON:0001049!4.30e-11!57;UBERON:0005068!4.30e-11!57;UBERON:0006241!4.30e-11!57;UBERON:0007135!4.30e-11!57;UBERON:0002020!6.02e-11!34;UBERON:0003528!6.02e-11!34;UBERON:0001869!8.62e-11!32;UBERON:0002780!2.45e-10!41;UBERON:0001890!2.45e-10!41;UBERON:0006240!2.45e-10!41;UBERON:0000955!3.77e-10!69;UBERON:0006238!3.77e-10!69;UBERON:0007023!6.21e-10!115;UBERON:0003080!6.23e-10!42;UBERON:0000956!6.32e-10!25;UBERON:0000203!6.32e-10!25;UBERON:0000073!8.39e-10!94;UBERON:0001016!8.39e-10!94;UBERON:0001017!1.03e-09!82;UBERON:0005743!1.32e-09!86;UBERON:0002616!1.80e-09!59;UBERON:0002619!3.07e-09!22;UBERON:0003075!5.10e-08!86;UBERON:0007284!5.10e-08!86;UBERON:0001950!7.22e-08!20;UBERON:0002346!2.95e-07!90;UBERON:0000475!5.56e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.42e-08;6!UBERON:0002358;1.42e-08;6!UBERON:0003684;1.42e-08;6!UBERON:0001178;1.42e-08;6!UBERON:0000941;3.03e-07;1!UBERON:0007195;3.03e-07;1!UBERON:0001785;3.03e-07;1!UBERON:0002464;3.03e-07;1!UBERON:0004904;3.03e-07;1!UBERON:0001021;3.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.42e-08,6;UBERON:0002358,1.42e-08,6;UBERON:0003684,1.42e-08,6;UBERON:0001178,1.42e-08,6;UBERON:0007195,2.95e-07,1;UBERON:0000941,3.13e-07,1;UBERON:0001785,3.13e-07,1;UBERON:0002464,3.13e-07,1;UBERON:0004904,3.13e-07,1;UBERON:0001021,3.13e-07,1;UBERON:0003902,3.13e-07,1;UBERON:0005425,3.13e-07,1;UBERON:0001136,8.75e-07,1;UBERON:0001343,8.75e-07,1;UBERON:0004910,8.75e-07,1;UBERON:0005154,8.75e-07,1;UBERON:0005295,8.75e-07,1;UBERON:0004813,8.75e-07,1;UBERON:0005297,8.75e-07,1;UBERON:0005294,8.75e-07,1;UBERON:0010141,8.75e-07,1;UBERON:0005891,8.75e-07,1 | |||
|phase1_expression=0.908391896352783,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0.50133791063589,0.579386075843295,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,3.97227542439656,1.14734648299525,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0.910161361938026,0.718618141816238,0,0,0,0.438977620880838,0.919463387397059,0.150238058906597,0,1.07633781413317,0.640672166455702,0.423863802319124,0.600182192168805,0,1.54584324027377,0.37223371266318,0.337552664482532,0.0974370051611986,1.00973509697646,0.828449087780694,0,2.13005755509969,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,2.29723871668228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,2.49800584316026,0.946214490203608,1.7571212248907,0,0,0,0,0.553107505625109,0.0868836144680828,0,0,0,0,0,0,3.32870879020994,0,0.496215615637554,2.14846762603287,0.561320188866147,1.53766979106841,1.02341449813341,1.60853921143608,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,1.6068392984416,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0.464845549297286,1.88887408098384,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.487426979262569,0,0.545999645631943,0,2.26016233240486,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0.552567831062295,0,0,0,0.933118762985422,0,0,0,0.591860433821602,0,4.44547960578548,0.969332746095218,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.876214728748802,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,2.44627570932505,1.35983700206033,0,0,0,0.273810757783986,0,0.859530882839914,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0.620964029413834,0,0,0.151649117541648,0,0,0,0,0,0.233713309847224,0,0.757612021100357,1.0062716070103,0,0,1.66354016139563,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0.727394636810238,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,2.27006381426734,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0.321146125482298,0,0.319267718114302,0.205116364240755,0.252071696221718,0.484100767249525,0.645902582527404,4.28308260777463,0,0,0,0,1.1441462864015,0,0,0.0752103283492573,1.21023041222112,0,0,1.63771917510097,0,0.270150338473579,0.781078098613847,0.206686796501184,0.317079050969534,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.342976018874837,1.08751572762931,0.328863867814245,0,0,0.235479278551542,0,0,0,0,0,1.00067161847319,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0.22910686854405,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,1.71603825227734,0,0.196308467114945,0.594092800654172,0,0.849635573439084,0,0,0,0,0.352894871715692,0,0,0,0.573358332605805,0,0.475940431336403,0,0,0.371995018166751,1.38652688589425,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0.724030971033267,0,0,0,0.0620747142958579,0.672791175483681,0,0,0,0,0,0,0,0,0.320182037633146,1.9307228228694,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p9@PDE1C | |||
}} |
Revision as of 16:26, 22 January 2014
Short description: | p9@PDE1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PDE1C_5end |
Coexpression cluster: | NA |
Association with transcript: | 134bp_to_NM_001191059, uc003tcn.1_5end |
EntrezGene: | PDE1C |
HGNC: | 8776 |
UniProt: | B3KSS6Q14123Q8NB10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.22e-16 | 3 |
receptor cell | 6.56e-09 | 6 |
sensory epithelial cell | 6.56e-09 | 6 |
olfactory epithelial cell | 6.56e-09 | 6 |
fibroblast | 6.68e-08 | 76 |
preadipocyte | 2.15e-07 | 12 |
smooth muscle cell of the pulmonary artery | 4.97e-07 | 1 |
androgen binding protein secreting cell | 8.75e-07 | 1 |
seminiferous tubule epithelial cell | 8.75e-07 | 1 |
Sertoli cell | 8.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.42e-08 | 6 |
peritoneum | 1.42e-08 | 6 |
abdominal cavity | 1.42e-08 | 6 |
visceral peritoneum | 1.42e-08 | 6 |
stroma of bone marrow | 2.95e-07 | 1 |
cranial nerve II | 3.13e-07 | 1 |
cranial nerve | 3.13e-07 | 1 |
nerve trunk | 3.13e-07 | 1 |
nerve connecting eye with brain | 3.13e-07 | 1 |
nerve | 3.13e-07 | 1 |
retinal neural layer | 3.13e-07 | 1 |
presumptive neural retina | 3.13e-07 | 1 |
mesothelium | 8.75e-07 | 1 |
seminiferous tubule of testis | 8.75e-07 | 1 |
epithelium of male gonad | 8.75e-07 | 1 |
epithelial cord | 8.75e-07 | 1 |
sex cord | 8.75e-07 | 1 |
seminiferous tubule epithelium | 8.75e-07 | 1 |
testis sex cord | 8.75e-07 | 1 |
genital ridge | 8.75e-07 | 1 |
primitive sex cord of indifferent gonad | 8.75e-07 | 1 |
coelomic epithelium | 8.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 7.82e-07 | 1 |