FFCP PHASE1:Hg19::chr7:82072780..82072800,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=781 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1399 | |||
|TSSclassifier=strong | |||
|UniProt=F8WC36,P54289,Q9UDQ3 | |||
|association_with_transcript=230bp_to_ENST00000284088,ENST00000356253,NM_000722,uc003uhr.1_5end | |||
|description=CAGE_peak_6_at_CACNA2D1_5end | |||
|id=chr7:82072780..82072800,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.73e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.87e-27!94;UBERON:0001016!9.87e-27!94;UBERON:0001017!2.50e-26!82;UBERON:0001049!2.62e-25!57;UBERON:0005068!2.62e-25!57;UBERON:0006241!2.62e-25!57;UBERON:0007135!2.62e-25!57;UBERON:0005743!3.62e-25!86;UBERON:0002780!2.30e-24!41;UBERON:0001890!2.30e-24!41;UBERON:0006240!2.30e-24!41;UBERON:0003080!2.96e-23!42;UBERON:0002616!1.17e-22!59;UBERON:0000955!1.05e-21!69;UBERON:0006238!1.05e-21!69;UBERON:0002346!1.41e-20!90;UBERON:0001893!4.94e-20!34;UBERON:0002020!5.76e-20!34;UBERON:0003528!5.76e-20!34;UBERON:0002791!2.43e-19!33;UBERON:0001869!4.54e-19!32;UBERON:0003075!4.81e-19!86;UBERON:0007284!4.81e-19!86;UBERON:0003056!1.52e-17!61;UBERON:0007023!4.51e-17!115;UBERON:0000924!9.45e-16!173;UBERON:0006601!9.45e-16!173;UBERON:0000033!3.42e-15!123;UBERON:0000956!5.72e-15!25;UBERON:0000203!5.72e-15!25;UBERON:0002619!6.96e-15!22;UBERON:0000153!1.22e-14!129;UBERON:0007811!1.22e-14!129;UBERON:0004121!1.64e-14!169;UBERON:0001950!8.39e-14!20;UBERON:0000025!1.53e-12!194;UBERON:0000475!1.47e-10!365;UBERON:0004111!2.57e-10!241;UBERON:0000483!9.97e-10!309;UBERON:0000477!1.09e-09!286;UBERON:0000119!2.26e-09!312;UBERON:0000468!4.58e-09!659;UBERON:0000922!3.76e-07!612;UBERON:0000481!8.31e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.59e-26;22!UBERON:0001893;6.37e-26;34!UBERON:0002780;6.75e-26;41!UBERON:0001890;6.75e-26;41!UBERON:0001869;2.45e-25;32!UBERON:0003528;3.14e-25;34!UBERON:0002020;3.14e-25;34!UBERON:0002791;5.68e-25;32!UBERON:0001950;3.80e-24;20!UBERON:0000956;2.46e-22;25!UBERON:0000203;2.46e-22;25!UBERON:0000073;9.93e-21;53!UBERON:0002616;9.93e-21;53!UBERON:0001017;3.35e-15;75!UBERON:0000955;1.38e-14;68!UBERON:0001016;1.29e-12;83!UBERON:0002420;3.86e-09;9!UBERON:0007245;3.86e-09;9!UBERON:0010009;3.86e-09;9!UBERON:0010011;3.86e-09;9!UBERON:0000454;3.86e-09;9!UBERON:0000200;4.41e-09;6!UBERON:0000125;6.79e-09;9!UBERON:0002308;6.79e-09;9!UBERON:0002021;1.26e-07;5!UBERON:0001871;1.93e-07;6!UBERON:0001894;2.28e-07;7!UBERON:0001872;3.10e-07;5!UBERON:0000349;3.49e-07;5!UBERON:0009663;4.92e-07;7!UBERON:0000369;6.02e-07;4!UBERON:0002435;6.02e-07;4!UBERON:0000204;6.02e-07;4!UBERON:0002298;6.83e-07;6!UBERON:0003296;7.30e-07;4!UBERON:0010133;7.30e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.69e-37,81;UBERON:0001049,1.79e-36,56;UBERON:0005068,1.79e-36,56;UBERON:0006241,1.79e-36,56;UBERON:0007135,1.79e-36,56;UBERON:0002780,2.50e-36,41;UBERON:0001890,2.50e-36,41;UBERON:0003080,2.50e-36,41;UBERON:0006240,2.50e-36,41;UBERON:0001016,2.71e-36,89;UBERON:0000073,2.09e-35,53;UBERON:0002616,2.09e-35,53;UBERON:0000955,8.34e-32,68;UBERON:0006238,8.34e-32,68;UBERON:0001893,3.54e-30,34;UBERON:0003528,4.58e-30,34;UBERON:0002020,4.58e-30,34;UBERON:0001869,1.98e-28,32;UBERON:0002791,4.66e-28,32;UBERON:0002346,1.66e-27,86;UBERON:0002619,2.16e-26,22;UBERON:0003075,1.60e-25,82;UBERON:0007284,1.60e-25,82;UBERON:0003056,5.78e-25,61;UBERON:0001950,1.97e-24,20;UBERON:0000956,2.10e-22,25;UBERON:0000203,2.10e-22,25;UBERON:0010371,8.35e-20,104;UBERON:0004121,1.00e-19,171;UBERON:0000924,1.00e-19,171;UBERON:0006601,1.00e-19,171;UBERON:0010314,1.75e-18,132;UBERON:0007023,1.43e-17,114;UBERON:0011216,3.37e-11,223;UBERON:0000025,2.52e-10,192;UBERON:0002420,3.14e-09,9;UBERON:0007245,3.14e-09,9;UBERON:0010009,3.14e-09,9;UBERON:0010011,3.14e-09,9;UBERON:0000454,3.14e-09,9;UBERON:0000200,3.89e-09,6;UBERON:0000125,4.66e-09,9;UBERON:0002308,4.66e-09,9;UBERON:0002021,1.05e-07,5;UBERON:0001872,1.49e-07,5;UBERON:0004111,1.59e-07,240;UBERON:0001894,1.72e-07,7;UBERON:0006222,1.72e-07,7;UBERON:0001871,2.18e-07,6;UBERON:0009663,4.15e-07,7;UBERON:0000349,5.24e-07,5;UBERON:0000369,5.50e-07,4;UBERON:0002435,5.50e-07,4;UBERON:0000204,5.50e-07,4;UBERON:0010082,5.50e-07,4;UBERON:0003296,7.43e-07,4;UBERON:0010133,7.43e-07,4;UBERON:0002298,8.95e-07,6 | |||
|phase1_expression=0.363356758541113,0.214100523890983,1.26858963686374,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0.85870796139317,0.821246550437305,0.251085279189606,5.57817861960044,5.7470412614962,4.95877922276179,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0.472674085820339,0.886917589850256,0.966182642624386,1.17881167947941,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0.825354125820202,0.626984899610432,0,1.42306505074684,0,0,0,0,1.10298924103761,0,0.446498641420399,0.673588117878509,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0,0,1.2663051166458,1.58891016975863,1.72101972449288,0.709336764396714,0,0,0.74000264525148,0.311211035399766,0.538842688278752,0.817309515567294,0,1.15235184896,0.70296429550139,0.312160076830321,0,0,0.822041490506354,0.485618833104395,0.280901613404497,0.204154171254893,0.368502951935304,0.929932030581889,3.56400857184616,1.23633464639278,0,0,0.673344455816265,0.500474079487857,0.554128230968366,0.877955241761676,0.30648779579902,0.600952235626387,0.226864366320042,0.538168907066586,1.06778694409284,0,0.300091096084402,0.721367704669072,1.8034837803194,0.18611685633159,1.5189869901714,0.389748020644795,1.51460264546469,0.644349290496095,0,0.710019185033229,0.403008392910561,0,0,0,0,2.43947412259191,1.85541675650079,1.04574548582567,0.829288440122964,1.00928340350251,3.28479623168247,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.34779121492523,1.87853910777315,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0.985326475791887,0.176096868026452,1.03664057770386,2.16179930125442,1.2624243342638,0.253991577168676,0,0,0,0.102827492703324,0,0.857479297891735,0,0,0.07333828582095,1.55126058909333,0,0.845302752556,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,1.06617584622764,0,0.602878754119172,0,0.099972991182057,0,0,0,1.19812427745791,0,0,0.723906533337896,0.205476322550383,0.179060963239896,0,0,0,0,3.30323011489202,1.30139853857622,0,1.17261385734044,1.27587750330633,0,0,0,0,0,0,0.415941723061614,1.24900292158013,0.315404830067869,0.468565659970853,0,0,0,0,0.184369168541703,0.521301686808497,0,0.343143423810856,0,0,0,0,0,0,0.992431231275107,0.460385919864187,0.280660094433074,0,0,0.64341568457443,0,0,0.710246901252508,0.164254312027618,2.07701771673448,0.348631135379878,0,0,0,0.68888668898764,0.728364672026868,0.655622074797121,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0.27470839445503,0.41254749960294,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.413509717453592,0.859361958946189,0.145016693914229,0.596586391912706,0.712256285173899,0.165284915360978,0,0.127612712494584,0,0,3.1481234683064,0,0,0.532306030317022,0,0.18532421910392,1.28812398067792,0,0.316379424718726,0.762520775695299,0,0.42793898803392,0.636406495851874,0.78494864019923,0.539617372749944,1.37268514868027,0.471249609382746,0,0,0.421258456238981,0,0.974853958525138,1.05650146756755,0.545999645631943,0.848432591722276,0,0,1.99031692572366,2.63070531152258,0,0,0.202910376962704,0.30982349809975,1.40847801266121,0.286822704408103,0.0982490410131212,0.35667105148125,1.41904425628239,0.422215270595328,0.329294892959902,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,7.95318118213038,1.40669416410513,0.445234820091624,0,1.05562704063997,0.398495976502139,0.828851746593443,3.52705846995986,2.65898574505602,0.615424027305347,1.86623752597084,0,0.179021174675609,0,0.591860433821602,0,0,5.81599647657131,4.73117300625441,0,0,0,0,0,0.254253650292766,0,0.689486746482929,1.16641845353302,4.34062487333231,6.20018970069687,3.85908603601305,0,0.552896299656123,0.591095237907095,4.38770794307945,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.884575645033392,1.22206028986725,0.889563386041866,0.741383633679017,1.67075119208729,1.61762719153625,0,3.51396668588009,0,0.19566461893209,0,0,0,4.28501866282686,0.821425535170343,1.20258735531594,0.414752765588989,0,0,0.313932918407225,0,0.284609546029793,0,0,0,0,0.52418000472609,0,0.387025325156341,1.09633975629278,0.492692742319255,0.0969890164884194,0,2.71176888936639,0.959293472527256,0,5.38141765624969,0,0,0.426905989478705,0.599428828746391,0,0,13.0412198375093,0,0.248505071130865,0,0,0,0,0.288950589901519,0.600420288709789,1.36905378891993,0,2.14882720709979,4.46908502274835,1.9549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| |||
|short_description=p6@CACNA2D1 | |||
}} |
Revision as of 17:38, 22 January 2014
Short description: | p6@CACNA2D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CACNA2D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 230bp_to_ENST00000284088, ENST00000356253, NM_000722, uc003uhr.1_5end |
EntrezGene: | CACNA2D1 |
HGNC: | 1399 |
UniProt: | F8WC36P54289Q9UDQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data