FFCP PHASE1:Hg19::chr8:43093088..43093110,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4756 | |||
|description=CAGE_peak_at_chr8:43093088..43093110,+ | |||
|id=chr8:43093088..43093110,+ | |||
|ontology_enrichment_celltype=CL:0000453!1.60e-13!5;CL:0002393!6.94e-10!9;CL:0002397!6.94e-10!9;CL:0002274!4.17e-09!5;CL:0000457!4.17e-09!5;CL:0002191!4.17e-09!5;CL:0000097!4.17e-09!5;CL:0000831!4.17e-09!5;CL:0002028!4.17e-09!5;CL:0000875!2.51e-08!3;CL:0002396!2.51e-08!3;CL:0000990!2.67e-07!8;CL:0000763!5.84e-07!112;CL:0000049!5.84e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.36e-22;5!CL:0001014;9.65e-15;2!CL:0001016;9.65e-15;2!CL:0000815;2.07e-14;2!CL:0000792;2.07e-14;2!CL:0002677;2.07e-14;2!CL:0000097;1.51e-13;5!CL:0000990;1.20e-12;8!CL:0000451;2.25e-10;10!CL:0000898;6.50e-10;3!CL:0000163;9.84e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.44e-22,5;CL:0001014,9.02e-15,2;CL:0001016,9.02e-15,2;CL:0000815,2.38e-14,2;CL:0000792,2.38e-14,2;CL:0002677,2.38e-14,2;CL:0000097,1.55e-13,5;CL:0002028,1.55e-13,5;CL:0000990,1.24e-12,8;CL:0000451,2.31e-10,10;CL:0000898,7.13e-10,3;CL:0000163,9.96e-08,9;CL:0000763,4.50e-07,108;CL:0000049,4.50e-07,108;CL:0000557,6.18e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.72e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.02e-08;1!UBERON:0000026;1.02e-08;1!UBERON:0008784;1.02e-08;1!UBERON:0006058;1.02e-08;1!UBERON:0003663;1.02e-08;1!UBERON:0004256;1.02e-08;1!UBERON:0004708;1.02e-08;1!UBERON:0002101;1.02e-08;1!UBERON:0004709;1.02e-08;1!UBERON:0002529;1.02e-08;1!UBERON:0010538;1.02e-08;1!UBERON:0003661;1.02e-08;1!UBERON:0010890;1.02e-08;1!UBERON:0002471;1.02e-08;1!UBERON:0001383;1.02e-08;1!UBERON:0010758;1.02e-08;1!UBERON:0010707;1.02e-08;1!UBERON:0000978;1.02e-08;1!UBERON:0002103;1.02e-08;1!UBERON:0001665;1.02e-08;1!UBERON:0003823;1.02e-08;1!UBERON:0000154;1.02e-08;1!UBERON:0010709;1.02e-08;1!UBERON:0000941;4.72e-08;1!UBERON:0001785;4.72e-08;1!UBERON:0002464;4.72e-08;1!UBERON:0004904;4.72e-08;1!UBERON:0001021;4.72e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,9.79e-09,1;UBERON:0001389,9.79e-09,1;UBERON:0000026,9.79e-09,1;UBERON:0008784,9.79e-09,1;UBERON:0006058,9.79e-09,1;UBERON:0003663,9.79e-09,1;UBERON:0004256,9.79e-09,1;UBERON:0004708,9.79e-09,1;UBERON:0002101,9.79e-09,1;UBERON:0004709,9.79e-09,1;UBERON:0002529,9.79e-09,1;UBERON:0010538,9.79e-09,1;UBERON:0003661,9.79e-09,1;UBERON:0010890,9.79e-09,1;UBERON:0002471,9.79e-09,1;UBERON:0001383,9.79e-09,1;UBERON:0004357,9.79e-09,1;UBERON:0004347,9.79e-09,1;UBERON:0005420,9.79e-09,1;UBERON:0005732,9.79e-09,1;UBERON:0010758,9.79e-09,1;UBERON:0010707,9.79e-09,1;UBERON:0000978,9.79e-09,1;UBERON:0002103,9.79e-09,1;UBERON:0001665,9.79e-09,1;UBERON:0003823,9.79e-09,1;UBERON:0000154,9.79e-09,1;UBERON:0010709,9.79e-09,1;UBERON:0005733,9.79e-09,1;UBERON:0005730,9.79e-09,1;UBERON:0000941,5.43e-08,1;UBERON:0001785,5.43e-08,1;UBERON:0002464,5.43e-08,1;UBERON:0004904,5.43e-08,1;UBERON:0001021,5.43e-08,1;UBERON:0003902,5.43e-08,1;UBERON:0005425,5.43e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1079900526674,0,0,0.633765858935825,2.55125159958052,0.628975936525128,0.22465726229299,0.901061357049038,0.803627933485401,0.570025487482497,1.19350006319454,0.547992461293902,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0.501559486172034,1.30368906653436,0.473447805734733,1.94826728407911,0.334231370655521,1.76763544484902,1.55073726208535,1.89562704635511,0.640456598628376,0.260118695119756,1.31550323682941,0.276350017785848,0.289803085735052,2.96573126324121,2.94294910898684,2.09071047609954,0.339928028092699,0,0.34362744548263,4.55435445635105,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,1.0126579934476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0,0,0,0,0.44024217006613,4.97587477297853,8.50307725160072,2.39860623510122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91381625495949,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78657797492418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.573645408816206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69968669861801,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,2.33832370607266,0.265729680626726,3.43487327937273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0.121917924982269,12.30114790657,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.981542335574726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:43093088..43093110,+ | |||
}} |
Revision as of 21:55, 22 January 2014
Short description: | p@chr8:43093088..43093110, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:43093088..43093110, + |
Coexpression cluster: | C4756_CD14_skeletal_Mast_CD4_migratory_HES3GFP_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.44e-22 | 5 |
CD1a-positive Langerhans cell | 9.02e-15 | 2 |
immature CD1a-positive Langerhans cell | 9.02e-15 | 2 |
regulatory T cell | 2.38e-14 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.38e-14 | 2 |
naive regulatory T cell | 2.38e-14 | 2 |
mast cell | 1.55e-13 | 5 |
basophil mast progenitor cell | 1.55e-13 | 5 |
conventional dendritic cell | 1.24e-12 | 8 |
dendritic cell | 2.31e-10 | 10 |
naive T cell | 7.13e-10 | 3 |
endocrine cell | 9.96e-08 | 9 |
myeloid cell | 4.50e-07 | 108 |
common myeloid progenitor | 4.50e-07 | 108 |
granulocyte monocyte progenitor cell | 6.18e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 9.79e-09 | 1 |
soleus muscle | 9.79e-09 | 1 |
appendage | 9.79e-09 | 1 |
lower limb segment | 9.79e-09 | 1 |
multi-limb segment region | 9.79e-09 | 1 |
hindlimb muscle | 9.79e-09 | 1 |
hindlimb zeugopod muscle | 9.79e-09 | 1 |
paired limb/fin | 9.79e-09 | 1 |
limb | 9.79e-09 | 1 |
pelvic appendage | 9.79e-09 | 1 |
limb segment | 9.79e-09 | 1 |
paired limb/fin segment | 9.79e-09 | 1 |
limb muscle | 9.79e-09 | 1 |
pelvic complex muscle | 9.79e-09 | 1 |
zeugopod | 9.79e-09 | 1 |
muscle of leg | 9.79e-09 | 1 |
paired limb/fin bud | 9.79e-09 | 1 |
limb bud | 9.79e-09 | 1 |
pelvic appendage bud | 9.79e-09 | 1 |
limb/fin field | 9.79e-09 | 1 |
subdivision of organism along appendicular axis | 9.79e-09 | 1 |
appendage girdle complex | 9.79e-09 | 1 |
leg | 9.79e-09 | 1 |
hindlimb | 9.79e-09 | 1 |
triceps surae | 9.79e-09 | 1 |
hindlimb zeugopod | 9.79e-09 | 1 |
posterior region of body | 9.79e-09 | 1 |
pelvic complex | 9.79e-09 | 1 |
limb field | 9.79e-09 | 1 |
hindlimb/pelvic fin field | 9.79e-09 | 1 |
cranial nerve II | 5.43e-08 | 1 |
cranial nerve | 5.43e-08 | 1 |
nerve trunk | 5.43e-08 | 1 |
nerve connecting eye with brain | 5.43e-08 | 1 |
nerve | 5.43e-08 | 1 |
retinal neural layer | 5.43e-08 | 1 |
presumptive neural retina | 5.43e-08 | 1 |