FFCP PHASE1:Hg19::chr9:2017365..2017380,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6595 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11098 | |||
|TSSclassifier=strong | |||
|UniProt=F6QYQ1 | |||
|association_with_transcript=-58bp_to_ENST00000439732_5end | |||
|description=CAGE_peak_9_at_SMARCA2_5end | |||
|id=chr9:2017365..2017380,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.22e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.40e-34!115;UBERON:0001049!9.05e-22!57;UBERON:0005068!9.05e-22!57;UBERON:0006241!9.05e-22!57;UBERON:0007135!9.05e-22!57;UBERON:0001017!9.26e-20!82;UBERON:0000955!1.23e-18!69;UBERON:0006238!1.23e-18!69;UBERON:0002616!2.15e-18!59;UBERON:0005743!2.68e-18!86;UBERON:0002020!2.74e-16!34;UBERON:0003528!2.74e-16!34;UBERON:0003075!3.40e-16!86;UBERON:0007284!3.40e-16!86;UBERON:0001893!3.81e-16!34;UBERON:0002346!5.63e-16!90;UBERON:0003080!7.63e-16!42;UBERON:0002791!1.55e-15!33;UBERON:0000073!1.65e-15!94;UBERON:0001016!1.65e-15!94;UBERON:0002780!2.05e-15!41;UBERON:0001890!2.05e-15!41;UBERON:0006240!2.05e-15!41;UBERON:0001869!3.85e-15!32;UBERON:0000956!4.86e-11!25;UBERON:0000203!4.86e-11!25;UBERON:0002619!2.35e-10!22;UBERON:0000153!3.28e-10!129;UBERON:0007811!3.28e-10!129;UBERON:0000033!5.14e-10!123;UBERON:0003056!2.31e-09!61;UBERON:0001950!3.14e-09!20;UBERON:0000924!5.58e-09!173;UBERON:0006601!5.58e-09!173;UBERON:0004121!6.47e-09!169;UBERON:0003076!3.53e-07!15;UBERON:0003057!3.53e-07!15;UBERON:0002420!5.05e-07!9;UBERON:0007245!5.05e-07!9;UBERON:0010009!5.05e-07!9;UBERON:0010011!5.05e-07!9;UBERON:0000454!5.05e-07!9;UBERON:0002308!6.37e-07!9;UBERON:0000125!6.37e-07!9;UBERON:0000025!7.28e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.74e-20;34!UBERON:0002020;2.74e-20;34!UBERON:0001893;2.87e-20;34!UBERON:0002791;1.75e-19;32!UBERON:0001869;2.32e-19;32!UBERON:0000073;1.28e-18;53!UBERON:0002616;1.28e-18;53!UBERON:0002780;3.64e-18;41!UBERON:0001890;3.64e-18;41!UBERON:0002619;3.95e-15;22!UBERON:0007023;5.51e-15;114!UBERON:0000956;2.97e-14;25!UBERON:0000203;2.97e-14;25!UBERON:0000955;2.20e-13;68!UBERON:0001017;2.71e-13;75!UBERON:0001950;4.79e-13;20!UBERON:0002420;1.96e-12;9!UBERON:0007245;1.96e-12;9!UBERON:0010009;1.96e-12;9!UBERON:0010011;1.96e-12;9!UBERON:0000454;1.96e-12;9!UBERON:0000125;3.41e-12;9!UBERON:0002308;3.41e-12;9!UBERON:0009663;1.13e-09;7!UBERON:0001016;2.03e-09;83!UBERON:0000200;6.95e-09;6!UBERON:0002298;9.11e-09;6!UBERON:0004733;1.28e-08;12!UBERON:0002028;1.28e-08;12!UBERON:0000349;8.61e-08;5!UBERON:0004732;8.83e-08;13!UBERON:0000369;9.83e-07;4!UBERON:0002435;9.83e-07;4!UBERON:0000204;9.83e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.15e-57,114;UBERON:0001049,1.59e-34,56;UBERON:0005068,1.59e-34,56;UBERON:0006241,1.59e-34,56;UBERON:0007135,1.59e-34,56;UBERON:0000073,2.56e-33,53;UBERON:0002616,2.56e-33,53;UBERON:0001017,1.57e-30,81;UBERON:0000955,1.76e-29,68;UBERON:0006238,1.76e-29,68;UBERON:0003075,7.92e-27,82;UBERON:0007284,7.92e-27,82;UBERON:0001016,7.32e-26,89;UBERON:0002780,9.54e-26,41;UBERON:0001890,9.54e-26,41;UBERON:0003080,9.54e-26,41;UBERON:0006240,9.54e-26,41;UBERON:0002346,7.57e-25,86;UBERON:0003528,1.48e-24,34;UBERON:0002020,1.48e-24,34;UBERON:0001893,2.67e-24,34;UBERON:0001869,2.51e-22,32;UBERON:0002791,3.98e-22,32;UBERON:0010371,5.16e-19,104;UBERON:0010314,4.27e-18,132;UBERON:0002619,2.00e-15,22;UBERON:0003056,3.26e-15,61;UBERON:0000956,1.56e-14,25;UBERON:0000203,1.56e-14,25;UBERON:0004121,1.75e-14,171;UBERON:0000924,1.75e-14,171;UBERON:0006601,1.75e-14,171;UBERON:0001950,2.94e-13,20;UBERON:0002420,1.08e-12,9;UBERON:0007245,1.08e-12,9;UBERON:0010009,1.08e-12,9;UBERON:0010011,1.08e-12,9;UBERON:0000454,1.08e-12,9;UBERON:0000125,1.73e-12,9;UBERON:0002308,1.73e-12,9;UBERON:0011216,4.67e-12,223;UBERON:0009663,6.90e-10,7;UBERON:0003076,8.35e-10,15;UBERON:0003057,8.35e-10,15;UBERON:0000025,2.68e-09,192;UBERON:0004111,3.44e-09,240;UBERON:0000200,3.75e-09,6;UBERON:0002298,5.33e-09,6;UBERON:0004733,1.02e-08,12;UBERON:0002028,1.02e-08,12;UBERON:0007277,1.02e-08,12;UBERON:0000349,5.02e-08,5;UBERON:0004732,7.16e-08,13;UBERON:0000369,7.27e-07,4;UBERON:0002435,7.27e-07,4;UBERON:0000204,7.27e-07,4;UBERON:0010082,7.27e-07,4 | |||
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| |||
|short_description=p9@SMARCA2 | |||
}} |
Revision as of 00:35, 23 January 2014
Short description: | p9@SMARCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SMARCA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_ENST00000439732_5end |
EntrezGene: | SMARCA2 |
HGNC: | 11098 |
UniProt: | F6QYQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data