FFCP PHASE1:Hg19::chrX:153599349..153599396,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3754 | |||
|TSSclassifier=weak | |||
|UniProt=Q60FE6,A6NDY9 | |||
|association_with_transcript=188bp_to_AB191259,AB371575,AB371577,AB371578,AB371579_5end | |||
|coexpression_cluster_id=C965 | |||
|description=CAGE_peak_5_at_FLNA_5end | |||
|id=chrX:153599349..153599396,- | |||
|ontology_enrichment_celltype=CL:0000144!5.16e-19!625;CL:0002371!4.75e-18!591;CL:0000548!4.88e-18!679;CL:0000004!4.88e-18!679;CL:0000255!4.88e-18!679;CL:0000012!2.04e-17!682;CL:0002057!3.95e-13!42;CL:0000003!5.73e-13!722;CL:0000860!1.34e-11!45;CL:0000055!3.71e-11!180;CL:0000063!3.44e-10!578;CL:0000048!4.34e-09!430;CL:0000723!7.30e-09!436;CL:0000034!3.06e-08!444;CL:0002194!3.57e-08!63;CL:0000576!3.57e-08!63;CL:0000040!3.57e-08!63;CL:0000559!3.57e-08!63;CL:0000222!2.08e-07!119;CL:0002009!3.92e-07!65;CL:0000057!4.24e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.07e-13;33!CL:0002057;3.07e-13;33!CL:0000473;3.14e-11;39!CL:0000234;3.14e-11;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.99e-14,48;CL:0000234,2.99e-14,48;CL:0000860,1.43e-13,42;CL:0002057,1.43e-13,42;CL:0000048,3.31e-10,427;CL:0000723,5.56e-10,433;CL:0002194,7.30e-10,59;CL:0000576,7.30e-10,59;CL:0000040,7.30e-10,59;CL:0000559,7.30e-10,59;CL:0000034,2.65e-09,441;CL:0002009,8.07e-09,61;CL:0000057,1.87e-07,76;CL:0000222,3.34e-07,121;CL:0000766,3.71e-07,72;CL:0000839,5.81e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;3.80e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.28e-08!216;UBERON:0001637!2.53e-08!42;UBERON:0003509!2.53e-08!42;UBERON:0004572!2.53e-08!42;UBERON:0002204!4.41e-08!167;UBERON:0000926!8.59e-07!448;UBERON:0004120!8.59e-07!448;UBERON:0006603!8.59e-07!448;UBERON:0002049!8.94e-07!79;UBERON:0007798!8.94e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.90e-13,315;UBERON:0004120,3.90e-13,315;UBERON:0006603,3.90e-13,315;UBERON:0003081,1.42e-09,203;UBERON:0002204,4.12e-09,167;UBERON:0001637,3.05e-08,42;UBERON:0003509,3.05e-08,42;UBERON:0004572,3.05e-08,42 | |||
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| |||
|short_description=p5@FLNA | |||
}} |
Revision as of 07:31, 23 January 2014
Short description: | p5@FLNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FLNA_5end |
Coexpression cluster: | C965_smooth_Osteoblast_Adipocyte_aorta_penis_Preadipocyte_normal |
Association with transcript: | 188bp_to_AB191259, AB371575, AB371577, AB371578, AB371579_5end |
EntrezGene: | FLNA |
HGNC: | 3754 |
UniProt: | Q60FE6A6NDY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.99e-14 | 48 |
phagocyte | 2.99e-14 | 48 |
classical monocyte | 1.43e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-13 | 42 |
multi fate stem cell | 3.31e-10 | 427 |
somatic stem cell | 5.56e-10 | 433 |
monopoietic cell | 7.30e-10 | 59 |
monocyte | 7.30e-10 | 59 |
monoblast | 7.30e-10 | 59 |
promonocyte | 7.30e-10 | 59 |
stem cell | 2.65e-09 | 441 |
macrophage dendritic cell progenitor | 8.07e-09 | 61 |
fibroblast | 1.87e-07 | 76 |
mesodermal cell | 3.34e-07 | 121 |
myeloid leukocyte | 3.71e-07 | 72 |
myeloid lineage restricted progenitor cell | 5.81e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.90e-13 | 315 |
mesoderm-derived structure | 3.90e-13 | 315 |
presumptive mesoderm | 3.90e-13 | 315 |
lateral plate mesoderm | 1.42e-09 | 203 |
musculoskeletal system | 4.12e-09 | 167 |
artery | 3.05e-08 | 42 |
arterial blood vessel | 3.05e-08 | 42 |
arterial system | 3.05e-08 | 42 |