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CL:0000223: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=endodermal cell
|name=endodermal cell
|namespace=cell
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0000925
|part_of=UBERON:0000925

Latest revision as of 16:32, 12 September 2014

Name:endodermal cell
Namespace:FANTOM
Definition:"A cell of the inner of the three germ layers of the embryo." [MESH:A.16.254.425.407]
Xrefs:
links:
FMA:72555
Synonyms: "endoderm cell" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0002321(embryonic cell)
part_of:UBERON:0000925(endoderm)



Children


develops from:CL:0000083 (epithelial cell of pancreas),CL:0002076 (endo-epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000223 (endodermal cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data