FFCP PHASE1:Hg19::chr12:72148728..72148739,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=23011 | |EntrezGene=entrezgene:23011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=18263 | |HGNC=HGNC:18263 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q9UL25 | |UniProt=uniprot:Q9UL25 | ||
|association_with_transcript=70bp_to_NM_014999,uc001swt.2_5end | |association_with_transcript=70bp_to_NM_014999,uc001swt.2_5end | ||
|cluster_id=chr12:72148728..72148739,+ | |||
|coexpression_cluster_id=C1685 | |coexpression_cluster_id=C1685 | ||
|description=CAGE_peak_3_at_RAB21_5end | |description=CAGE_peak_3_at_RAB21_5end |
Revision as of 12:14, 24 July 2015
Short description: | p3@RAB21 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAB21_5end |
Coexpression cluster: | C1685_immature_CD14_Eosinophils_CD34_migratory_lymphoma_Neutrophils |
Association with transcript: | 70bp_to_NM_014999, uc001swt.2_5end |
EntrezGene: | 23011 |
HGNC: | 18263 |
UniProt: | Q9UL25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@RAB21 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.18e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.18e-37 | 42 |
myeloid leukocyte | 3.36e-37 | 72 |
leukocyte | 1.16e-36 | 136 |
defensive cell | 2.80e-35 | 48 |
phagocyte | 2.80e-35 | 48 |
granulocyte monocyte progenitor cell | 6.45e-30 | 67 |
macrophage dendritic cell progenitor | 1.90e-28 | 61 |
hematopoietic cell | 7.76e-28 | 177 |
hematopoietic stem cell | 8.63e-27 | 168 |
Showing 1 to 10 of 29 entries
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.47e-25 | 76 |
skeletal element | 7.13e-23 | 90 |
hematopoietic system | 1.40e-22 | 98 |
blood island | 1.40e-22 | 98 |
bone element | 4.14e-22 | 82 |
hemolymphoid system | 2.90e-20 | 108 |
skeletal system | 2.97e-19 | 100 |
immune system | 3.99e-19 | 93 |
musculoskeletal system | 2.33e-14 | 167 |
lateral plate mesoderm | 1.51e-12 | 203 |
Showing 1 to 10 of 14 entries