FFCP PHASE1:Hg19::chr16:68269971..68270059,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=80004 | |EntrezGene=entrezgene:80004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=26152 | |HGNC=HGNC:26152 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000251366_5end | |association_with_transcript=0bp_to_ENST00000251366_5end | ||
|cluster_id=chr16:68269971..68270059,- | |||
|description=CAGE_peak_1_at_ESRP2_5end | |description=CAGE_peak_1_at_ESRP2_5end | ||
|id=chr16:68269971..68270059,- | |id=chr16:68269971..68270059,- |
Revision as of 11:40, 25 July 2015
Short description: | p1@ESRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ESRP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000251366_5end |
EntrezGene: | 80004 |
HGNC: | 26152 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ESRP2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.25e-52 | 253 |
endodermal cell | 7.60e-27 | 58 |
endo-epithelial cell | 3.54e-23 | 42 |
epithelial cell of alimentary canal | 5.53e-12 | 20 |
respiratory epithelial cell | 3.43e-11 | 13 |
general ecto-epithelial cell | 8.82e-08 | 14 |
kidney tubule cell | 1.38e-07 | 10 |
nephron tubule epithelial cell | 1.38e-07 | 10 |
epithelial cell of tracheobronchial tree | 1.49e-07 | 9 |
epithelial cell of lower respiratory tract | 1.49e-07 | 9 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.41e-39 | 160 |
endoderm | 5.41e-39 | 160 |
presumptive endoderm | 5.41e-39 | 160 |
digestive system | 1.29e-32 | 145 |
digestive tract | 1.29e-32 | 145 |
primitive gut | 1.29e-32 | 145 |
subdivision of digestive tract | 7.16e-32 | 118 |
foregut | 6.73e-26 | 87 |
respiratory system | 1.46e-22 | 74 |
respiratory tract | 7.96e-19 | 54 |
Showing 1 to 10 of 54 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.10e-34 | 106 |
cell type cancer | 7.38e-24 | 143 |
squamous cell carcinoma | 4.79e-11 | 14 |
cancer | 5.89e-09 | 235 |
adenocarcinoma | 2.02e-08 | 25 |
disease of cellular proliferation | 2.76e-08 | 239 |
Showing 1 to 6 of 6 entries