FFCP PHASE1:Hg19::chr5:142784003..142784065,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2908 | |EntrezGene=entrezgene:2908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7978 | |HGNC=HGNC:7978 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=B7Z7I2,F1D8N4,P04150 | |UniProt=uniprot:B7Z7I2,uniprot:F1D8N4,uniprot:P04150 | ||
|association_with_transcript=0bp_to_ENST00000416954,NM_001018076,uc003lnb.2,uc011dbk.1_5end | |association_with_transcript=0bp_to_ENST00000416954,NM_001018076,uc003lnb.2,uc011dbk.1_5end | ||
|cluster_id=chr5:142784003..142784065,- | |||
|coexpression_cluster_id=C176 | |coexpression_cluster_id=C176 | ||
|description=CAGE_peak_2_at_NR3C1_5end | |description=CAGE_peak_2_at_NR3C1_5end |
Revision as of 10:57, 30 July 2015
Short description: | p2@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NR3C1_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000416954, NM_001018076, uc003lnb.2, uc011dbk.1_5end |
EntrezGene: | 2908 |
HGNC: | 7978 |
UniProt: | B7Z7I2F1D8N4P04150 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@NR3C1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.10e-40 | 136 |
myeloid leukocyte | 6.80e-35 | 72 |
nongranular leukocyte | 1.89e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 2.09e-33 | 120 |
granulocyte monocyte progenitor cell | 1.56e-30 | 67 |
macrophage dendritic cell progenitor | 7.74e-29 | 61 |
hematopoietic stem cell | 1.89e-28 | 168 |
monopoietic cell | 1.91e-28 | 59 |
monocyte | 1.91e-28 | 59 |
monoblast | 1.91e-28 | 59 |
Showing 1 to 10 of 33 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.88e-33 | 98 |
blood island | 1.88e-33 | 98 |
hemolymphoid system | 3.39e-27 | 108 |
bone marrow | 1.11e-26 | 76 |
bone element | 1.22e-24 | 82 |
skeletal system | 4.80e-23 | 100 |
skeletal element | 1.21e-22 | 90 |
immune system | 3.26e-22 | 93 |
connective tissue | 1.03e-18 | 371 |
musculoskeletal system | 8.62e-13 | 167 |
Showing 1 to 10 of 11 entries