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FFCP PHASE1:Mm9::chr7:116093986..116093999,+: Difference between revisions

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{{FFCP|EntrezGene=22141|HGNC=|MCL_coexpression_id=22|UniProt=Q3UEX1|association_with_transcript=134bp_to_uc009jdd.1_5end|description=CAGE_peak_4_at_Tub_5end|id=chr7:116093986..116093999,+|ontology_enrichment_celltype=CL:0000117!4.60e-14!23;CL:0000337!4.60e-14!23;CL:0000540!7.07e-12!33;CL:0000047!7.07e-12!33;CL:0000031!7.07e-12!33;CL:0000404!7.07e-12!33;CL:0000393!2.56e-09!39;CL:0000211!2.56e-09!39;CL:0002319!3.54e-08!43;CL:0000221!8.88e-08!44;CL:0000133!8.88e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,4.10e-10,23;CL:0000337,4.10e-10,23;CL:0002613,6.85e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.50e-24!73;UBERON:0005743!1.50e-24!73;UBERON:0000073!4.87e-24!75;UBERON:0001016!4.87e-24!75;UBERON:0001049!3.19e-23!52;UBERON:0005068!3.19e-23!52;UBERON:0006241!3.19e-23!52;UBERON:0007135!3.19e-23!52;UBERON:0002346!5.65e-22!71;UBERON:0003075!5.65e-22!71;UBERON:0007284!5.65e-22!71;UBERON:0000955!6.42e-22!50;UBERON:0006238!6.42e-22!50;UBERON:0002616!1.66e-21!49;UBERON:0003056!4.33e-21!49;UBERON:0004121!9.29e-21!102;UBERON:0000924!9.29e-21!102;UBERON:0006601!9.29e-21!102;UBERON:0000033!1.05e-20!63;UBERON:0003080!8.06e-20!40;UBERON:0002780!4.39e-19!39;UBERON:0001890!4.39e-19!39;UBERON:0006240!4.39e-19!39;UBERON:0002020!9.73e-19!34;UBERON:0002791!2.97e-16!29;UBERON:0003528!2.97e-16!29;UBERON:0001893!2.97e-16!29;UBERON:0000956!4.67e-12!21;UBERON:0001869!4.67e-12!21;UBERON:0000203!4.67e-12!21;UBERON:0007811!1.83e-11!86;UBERON:0000153!8.05e-11!94;UBERON:0002619!4.74e-09!17;UBERON:0002021!3.44e-07!10;UBERON:0000411!3.44e-07!10;UBERON:0001950!3.44e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0003080,1.79e-31,40;UBERON:0002780,1.29e-29,39;UBERON:0001890,1.29e-29,39;UBERON:0006240,1.29e-29,39;UBERON:0002616,2.93e-29,46;UBERON:0000073,8.63e-29,54;UBERON:0000955,1.59e-28,47;UBERON:0006238,1.59e-28,47;UBERON:0001049,1.08e-27,52;UBERON:0005068,1.08e-27,52;UBERON:0006241,1.08e-27,52;UBERON:0007135,1.08e-27,52;UBERON:0003056,2.09e-27,49;UBERON:0003528,2.81e-24,29;UBERON:0002791,2.81e-24,29;UBERON:0001893,2.81e-24,29;UBERON:0001017,7.80e-24,73;UBERON:0002346,1.11e-23,64;UBERON:0003075,1.11e-23,64;UBERON:0007284,1.11e-23,64;UBERON:0001016,4.83e-23,75;UBERON:0002020,9.79e-23,34;UBERON:0010371,4.54e-20,73;UBERON:0000956,7.49e-20,21;UBERON:0001869,7.49e-20,21;UBERON:0000203,7.49e-20,21;UBERON:0004121,1.27e-18,95;UBERON:0000924,1.27e-18,95;UBERON:0006601,1.27e-18,95;UBERON:0002619,9.18e-15,17;UBERON:0010314,9.22e-15,92;UBERON:0002021,8.07e-13,10;UBERON:0000411,8.07e-13,10;UBERON:0001950,8.07e-13,10;UBERON:0000025,1.15e-09,114;UBERON:0000369,3.04e-09,5;UBERON:0002435,3.04e-09,5;UBERON:0000204,3.04e-09,5;UBERON:0010082,3.04e-09,5;UBERON:0004111,1.12e-08,122|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,2.83243045203437,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0.933206510776299,1.62007125998029,1.26194976810829,0.285650984403804,0.441737081903227,0.979926393719632,0.862609239164127,2.75765635983006,1.10115880999389,0.127687338085188,0.768032666281217,2.2420668914133,3.56801810049398,1.04182674111352,0.558365998002762,0,0.763991238884051,0.294628585473668,1.28134512719193,0.745597783301202,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0,0,0,0,1.17112318804619,0.209446706813455,0,0,0,0,1.04853447583376,0.915001205637253,2.89005009859588,1.73824320192276,0.511430914660661,1.24672826735736,1.1356888414743,0.101839363850316,0,0,0.631325567659422,0,0.229902104433473,0,0.30140963567143,0.272145996605311,0.384341160854549,0.0937017245597288,3.3631438196072,0.646703978798527,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,1.26173969138476,4.32199371992995,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,2.04263763452273,0.18006109403131,0,0,0.177340233642274,1.07021290561242,1.64549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.651021924219751,0.524296722128554,0.483168241652012,1.72818003754719,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,3.22227665555024,1.14579102687879,1.20297227640581,1.37016503954128,0,1.35004500046361,3.60256962579376,0.906284817968409,0.51776031175182,0,0,0,0.243106717068294,0.838452650511929,0.551530525350042,0,0.206035057238894,0.64183841918363,1.01078884705519,0.25347929989024,0.943131706930381,0.37456602987953,0.832326981263301,0.574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0,1.03039244094078,0,0.532427418478012,0.238436189947321,0.290692833264657,0.846984423737976,0.25384382367503,0.548783918618318,0.526139422875686,0,1.12228454331548,0.118635018124174,0.788035859004508,0.409231043169689,0.309873682371932,0.192906610981141,0.999242311751784,0.701794825336225,1.07435527024149,0.382576664137687,0,0|short_description=p4@Tub}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:22141
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=uniprot:Q3UEX1
|association_with_transcript=134bp_to_uc009jdd.1_5end
|cluster_id=chr7:116093986..116093999,+
|description=CAGE_peak_4_at_Tub_5end
|id=chr7:116093986..116093999,+
|ontology_enrichment_celltype=CL:0000117!4.60e-14!23;CL:0000337!4.60e-14!23;CL:0000540!7.07e-12!33;CL:0000047!7.07e-12!33;CL:0000031!7.07e-12!33;CL:0000404!7.07e-12!33;CL:0000393!2.56e-09!39;CL:0000211!2.56e-09!39;CL:0002319!3.54e-08!43;CL:0000221!8.88e-08!44;CL:0000133!8.88e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000117,4.10e-10,23;CL:0000337,4.10e-10,23;CL:0002613,6.85e-09,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.50e-24!73;UBERON:0005743!1.50e-24!73;UBERON:0000073!4.87e-24!75;UBERON:0001016!4.87e-24!75;UBERON:0001049!3.19e-23!52;UBERON:0005068!3.19e-23!52;UBERON:0006241!3.19e-23!52;UBERON:0007135!3.19e-23!52;UBERON:0002346!5.65e-22!71;UBERON:0003075!5.65e-22!71;UBERON:0007284!5.65e-22!71;UBERON:0000955!6.42e-22!50;UBERON:0006238!6.42e-22!50;UBERON:0002616!1.66e-21!49;UBERON:0003056!4.33e-21!49;UBERON:0004121!9.29e-21!102;UBERON:0000924!9.29e-21!102;UBERON:0006601!9.29e-21!102;UBERON:0000033!1.05e-20!63;UBERON:0003080!8.06e-20!40;UBERON:0002780!4.39e-19!39;UBERON:0001890!4.39e-19!39;UBERON:0006240!4.39e-19!39;UBERON:0002020!9.73e-19!34;UBERON:0002791!2.97e-16!29;UBERON:0003528!2.97e-16!29;UBERON:0001893!2.97e-16!29;UBERON:0000956!4.67e-12!21;UBERON:0001869!4.67e-12!21;UBERON:0000203!4.67e-12!21;UBERON:0007811!1.83e-11!86;UBERON:0000153!8.05e-11!94;UBERON:0002619!4.74e-09!17;UBERON:0002021!3.44e-07!10;UBERON:0000411!3.44e-07!10;UBERON:0001950!3.44e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0003080,1.79e-31,40;UBERON:0002780,1.29e-29,39;UBERON:0001890,1.29e-29,39;UBERON:0006240,1.29e-29,39;UBERON:0002616,2.93e-29,46;UBERON:0000073,8.63e-29,54;UBERON:0000955,1.59e-28,47;UBERON:0006238,1.59e-28,47;UBERON:0001049,1.08e-27,52;UBERON:0005068,1.08e-27,52;UBERON:0006241,1.08e-27,52;UBERON:0007135,1.08e-27,52;UBERON:0003056,2.09e-27,49;UBERON:0003528,2.81e-24,29;UBERON:0002791,2.81e-24,29;UBERON:0001893,2.81e-24,29;UBERON:0001017,7.80e-24,73;UBERON:0002346,1.11e-23,64;UBERON:0003075,1.11e-23,64;UBERON:0007284,1.11e-23,64;UBERON:0001016,4.83e-23,75;UBERON:0002020,9.79e-23,34;UBERON:0010371,4.54e-20,73;UBERON:0000956,7.49e-20,21;UBERON:0001869,7.49e-20,21;UBERON:0000203,7.49e-20,21;UBERON:0004121,1.27e-18,95;UBERON:0000924,1.27e-18,95;UBERON:0006601,1.27e-18,95;UBERON:0002619,9.18e-15,17;UBERON:0010314,9.22e-15,92;UBERON:0002021,8.07e-13,10;UBERON:0000411,8.07e-13,10;UBERON:0001950,8.07e-13,10;UBERON:0000025,1.15e-09,114;UBERON:0000369,3.04e-09,5;UBERON:0002435,3.04e-09,5;UBERON:0000204,3.04e-09,5;UBERON:0010082,3.04e-09,5;UBERON:0004111,1.12e-08,122
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,2.83243045203437,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0.933206510776299,1.62007125998029,1.26194976810829,0.285650984403804,0.441737081903227,0.979926393719632,0.862609239164127,2.75765635983006,1.10115880999389,0.127687338085188,0.768032666281217,2.2420668914133,3.56801810049398,1.04182674111352,0.558365998002762,0,0.763991238884051,0.294628585473668,1.28134512719193,0.745597783301202,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0,0,0,0,1.17112318804619,0.209446706813455,0,0,0,0,1.04853447583376,0.915001205637253,2.89005009859588,1.73824320192276,0.511430914660661,1.24672826735736,1.1356888414743,0.101839363850316,0,0,0.631325567659422,0,0.229902104433473,0,0.30140963567143,0.272145996605311,0.384341160854549,0.0937017245597288,3.3631438196072,0.646703978798527,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,1.26173969138476,4.32199371992995,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,2.04263763452273,0.18006109403131,0,0,0.177340233642274,1.07021290561242,1.64549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.651021924219751,0.524296722128554,0.483168241652012,1.72818003754719,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,3.22227665555024,1.14579102687879,1.20297227640581,1.37016503954128,0,1.35004500046361,3.60256962579376,0.906284817968409,0.51776031175182,0,0,0,0.243106717068294,0.838452650511929,0.551530525350042,0,0.206035057238894,0.64183841918363,1.01078884705519,0.25347929989024,0.943131706930381,0.37456602987953,0.832326981263301,0.574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0,1.03039244094078,0,0.532427418478012,0.238436189947321,0.290692833264657,0.846984423737976,0.25384382367503,0.548783918618318,0.526139422875686,0,1.12228454331548,0.118635018124174,0.788035859004508,0.409231043169689,0.309873682371932,0.192906610981141,0.999242311751784,0.701794825336225,1.07435527024149,0.382576664137687,0,0
|short_description=p4@Tub
}}

Revision as of 00:33, 4 August 2015

Short description:p4@Tub
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Tub_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 134bp_to_uc009jdd.1_5end
EntrezGene:22141
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p4@Tub

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.10e-1023
neuroblast (sensu Vertebrata)4.10e-1023
striatum neuron6.85e-093

Uber anatomy
Ontology termp-valuen
anterior neural tube1.79e-3140
regional part of forebrain1.29e-2939
forebrain1.29e-2939
future forebrain1.29e-2939
regional part of brain2.93e-2946
regional part of nervous system8.63e-2954
brain1.59e-2847
future brain1.59e-2847
neural tube1.08e-2752
neural rod1.08e-2752
future spinal cord1.08e-2752
neural keel1.08e-2752
pre-chordal neural plate2.09e-2749
brain grey matter2.81e-2429
regional part of telencephalon2.81e-2429
telencephalon2.81e-2429
central nervous system7.80e-2473
neurectoderm1.11e-2364
neural plate1.11e-2364
presumptive neural plate1.11e-2364
nervous system4.83e-2375
gray matter9.79e-2334
ecto-epithelium4.54e-2073
cerebral cortex7.49e-2021
cerebral hemisphere7.49e-2021
pallium7.49e-2021
ectoderm-derived structure1.27e-1895
ectoderm1.27e-1895
presumptive ectoderm1.27e-1895
regional part of cerebral cortex9.18e-1517
structure with developmental contribution from neural crest9.22e-1592
occipital lobe8.07e-1310
visual cortex8.07e-1310
neocortex8.07e-1310
tube1.15e-09114
corpus striatum3.04e-095
striatum3.04e-095
ventral part of telencephalon3.04e-095
future corpus striatum3.04e-095
anatomical conduit1.12e-08122
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