FFCP PHASE1:Mm9::chr16:7150004..7150009,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1385|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:7150004..7150009,+|id=chr16:7150004..7150009,+|ontology_enrichment_celltype=CL:0000117!5.32e-12!23;CL:0000337!5.32e-12!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.12e-24,23;CL:0000337,3.12e-24,23;CL:0000540,5.11e-16,33;CL:0000047,5.11e-16,33;CL:0000031,5.11e-16,33;CL:0000404,5.11e-16,33;CL:0000393,4.11e-13,39;CL:0000211,4.11e-13,39;CL:0002319,1.26e-11,43;CL:0000221,2.68e-11,44;CL:0000133,2.68e-11,44;CL:0002608,8.96e-11,3;CL:0000120,1.12e-10,3;CL:0002612,3.09e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.70e-13!52;UBERON:0005068!4.70e-13!52;UBERON:0006241!4.70e-13!52;UBERON:0007135!4.70e-13!52;UBERON:0000955!1.86e-12!50;UBERON:0006238!1.86e-12!50;UBERON:0000033!4.24e-12!63;UBERON:0002616!9.10e-12!49;UBERON:0002346!2.04e-11!71;UBERON:0003075!2.04e-11!71;UBERON:0007284!2.04e-11!71;UBERON:0001017!2.76e-11!73;UBERON:0005743!2.76e-11!73;UBERON:0000073!2.82e-11!75;UBERON:0001016!2.82e-11!75;UBERON:0004121!2.33e-10!102;UBERON:0000924!2.33e-10!102;UBERON:0006601!2.33e-10!102;UBERON:0002020!2.03e-09!34;UBERON:0003056!6.41e-09!49;UBERON:0003080!7.23e-09!40;UBERON:0002780!2.99e-08!39;UBERON:0001890!2.99e-08!39;UBERON:0006240!2.99e-08!39;UBERON:0000153!1.47e-07!94;UBERON:0007811!6.03e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.17e-25,73;UBERON:0001016,5.64e-24,75;UBERON:0000073,8.16e-24,54;UBERON:0001049,1.41e-22,52;UBERON:0005068,1.41e-22,52;UBERON:0006241,1.41e-22,52;UBERON:0007135,1.41e-22,52;UBERON:0000955,3.38e-18,47;UBERON:0006238,3.38e-18,47;UBERON:0004121,6.63e-18,95;UBERON:0000924,6.63e-18,95;UBERON:0006601,6.63e-18,95;UBERON:0002346,1.52e-17,64;UBERON:0003075,1.52e-17,64;UBERON:0007284,1.52e-17,64;UBERON:0002616,2.52e-16,46;UBERON:0003076,1.84e-15,12;UBERON:0003057,1.84e-15,12;UBERON:0002020,2.30e-15,34;UBERON:0010371,7.47e-15,73;UBERON:0010314,6.73e-11,92;UBERON:0003080,7.97e-11,40;UBERON:0000369,1.38e-10,5;UBERON:0002435,1.38e-10,5;UBERON:0000204,1.38e-10,5;UBERON:0010082,1.38e-10,5;UBERON:0001948,2.87e-10,5;UBERON:0002315,2.87e-10,5;UBERON:0002257,3.09e-10,3;UBERON:0002420,9.45e-10,8;UBERON:0007245,9.45e-10,8;UBERON:0010009,9.45e-10,8;UBERON:0010011,9.45e-10,8;UBERON:0000454,9.45e-10,8;UBERON:0002780,2.53e-09,39;UBERON:0001890,2.53e-09,39;UBERON:0006240,2.53e-09,39;UBERON:0003528,4.02e-09,29;UBERON:0002791,4.02e-09,29;UBERON:0001893,4.02e-09,29;UBERON:0002240,1.44e-08,6;UBERON:0005174,1.44e-08,6;UBERON:0001137,1.44e-08,6;UBERON:0004733,2.08e-08,6;UBERON:0004732,2.08e-08,6;UBERON:0002028,2.08e-08,6;UBERON:0007277,2.08e-08,6;UBERON:0003056,2.31e-08,49;UBERON:0000025,5.74e-08,114;UBERON:0004111,3.65e-07,122;UBERON:0001896,6.53e-07,2;UBERON:0002298,6.53e-07,2;UBERON:0005290,6.53e-07,2;UBERON:0010096,6.53e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,2.63011399117477,8.46385566835253,2.53532561402472,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,1.42825492201902,0.441737081903227,3.55223317723367,2.77951865952885,5.51531271966013,1.10115880999389,0.893811366596314,0.768032666281217,0.659431438650969,1.18933936683133,2.08365348222704,1.3959149950069,0,0.61119299110724,1.47314292736834,2.56269025438385,3.72798891650601,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0.884610551949874,0.161766849947409,0,0,0,2.34224637609238,2.09446706813455,0,0,0,0,3.89455662452539,16.0125210986519,4.14659361972453,1.39059456153821,0.767146371990992,1.87009240103604,2.27137768294861,0,0,0,0.631325567659422,0,0,0,0.30140963567143,0,0.896796041993948,0.655912071918102,0.776110112217047,0.431135985865684,0.567318240503458,0,0.43839146485515,0.556094498451196,0.696504333044333,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0.438599962275997,0.439100230582101,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0.379335801906163,0.913988100877831,1.1270773567308,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,1.44495530989013,1.64096361229084,0,1.76729649043061,0,0,0.646270193198397,0,0,0,0,0,0,8.03303291054518,0,0,0,0,0,0.485561272309963,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.428674070063185,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.32977250588296,0.322928853391811,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0.387479470433193,0.337912250981556,0,0,0,0,0.576060012515731,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0.0962118416403295,0,0.680191150845634,0,0,0,0,0,0,0.643105137237198,0,0.564751842617067,0.920650473014354,0.572895513439397,1.03111909406213,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.31136204275253,0.798049746802062,0.682934423016537,0.729320151204882,0,0.367687016900028,0.44449345560323,0.618105171716683,0,0.252697211763798,0.25347929989024,0,0.842773567228942,0.640251524048693,0.804096565378586,0.476293691283074,1.0429589335037,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.70990322463735,0.953744759789284,0.581385666529314,0.752875043322645,0.423073039458382,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0.474540072496697,0.689531376628944,0,0.619747364743864,0.771626443924566,0.499621155875892,0.701794825336225,0.429742108096597,0.191288332068843,0.441182838239031,0|short_description=p@chr16:7150004..7150009,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1385 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:7150004..7150009,+ | |||
|description=CAGE_peak_at_chr16:7150004..7150009,+ | |||
|id=chr16:7150004..7150009,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.32e-12!23;CL:0000337!5.32e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.12e-24,23;CL:0000337,3.12e-24,23;CL:0000540,5.11e-16,33;CL:0000047,5.11e-16,33;CL:0000031,5.11e-16,33;CL:0000404,5.11e-16,33;CL:0000393,4.11e-13,39;CL:0000211,4.11e-13,39;CL:0002319,1.26e-11,43;CL:0000221,2.68e-11,44;CL:0000133,2.68e-11,44;CL:0002608,8.96e-11,3;CL:0000120,1.12e-10,3;CL:0002612,3.09e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.70e-13!52;UBERON:0005068!4.70e-13!52;UBERON:0006241!4.70e-13!52;UBERON:0007135!4.70e-13!52;UBERON:0000955!1.86e-12!50;UBERON:0006238!1.86e-12!50;UBERON:0000033!4.24e-12!63;UBERON:0002616!9.10e-12!49;UBERON:0002346!2.04e-11!71;UBERON:0003075!2.04e-11!71;UBERON:0007284!2.04e-11!71;UBERON:0001017!2.76e-11!73;UBERON:0005743!2.76e-11!73;UBERON:0000073!2.82e-11!75;UBERON:0001016!2.82e-11!75;UBERON:0004121!2.33e-10!102;UBERON:0000924!2.33e-10!102;UBERON:0006601!2.33e-10!102;UBERON:0002020!2.03e-09!34;UBERON:0003056!6.41e-09!49;UBERON:0003080!7.23e-09!40;UBERON:0002780!2.99e-08!39;UBERON:0001890!2.99e-08!39;UBERON:0006240!2.99e-08!39;UBERON:0000153!1.47e-07!94;UBERON:0007811!6.03e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.17e-25,73;UBERON:0001016,5.64e-24,75;UBERON:0000073,8.16e-24,54;UBERON:0001049,1.41e-22,52;UBERON:0005068,1.41e-22,52;UBERON:0006241,1.41e-22,52;UBERON:0007135,1.41e-22,52;UBERON:0000955,3.38e-18,47;UBERON:0006238,3.38e-18,47;UBERON:0004121,6.63e-18,95;UBERON:0000924,6.63e-18,95;UBERON:0006601,6.63e-18,95;UBERON:0002346,1.52e-17,64;UBERON:0003075,1.52e-17,64;UBERON:0007284,1.52e-17,64;UBERON:0002616,2.52e-16,46;UBERON:0003076,1.84e-15,12;UBERON:0003057,1.84e-15,12;UBERON:0002020,2.30e-15,34;UBERON:0010371,7.47e-15,73;UBERON:0010314,6.73e-11,92;UBERON:0003080,7.97e-11,40;UBERON:0000369,1.38e-10,5;UBERON:0002435,1.38e-10,5;UBERON:0000204,1.38e-10,5;UBERON:0010082,1.38e-10,5;UBERON:0001948,2.87e-10,5;UBERON:0002315,2.87e-10,5;UBERON:0002257,3.09e-10,3;UBERON:0002420,9.45e-10,8;UBERON:0007245,9.45e-10,8;UBERON:0010009,9.45e-10,8;UBERON:0010011,9.45e-10,8;UBERON:0000454,9.45e-10,8;UBERON:0002780,2.53e-09,39;UBERON:0001890,2.53e-09,39;UBERON:0006240,2.53e-09,39;UBERON:0003528,4.02e-09,29;UBERON:0002791,4.02e-09,29;UBERON:0001893,4.02e-09,29;UBERON:0002240,1.44e-08,6;UBERON:0005174,1.44e-08,6;UBERON:0001137,1.44e-08,6;UBERON:0004733,2.08e-08,6;UBERON:0004732,2.08e-08,6;UBERON:0002028,2.08e-08,6;UBERON:0007277,2.08e-08,6;UBERON:0003056,2.31e-08,49;UBERON:0000025,5.74e-08,114;UBERON:0004111,3.65e-07,122;UBERON:0001896,6.53e-07,2;UBERON:0002298,6.53e-07,2;UBERON:0005290,6.53e-07,2;UBERON:0010096,6.53e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,2.63011399117477,8.46385566835253,2.53532561402472,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,1.42825492201902,0.441737081903227,3.55223317723367,2.77951865952885,5.51531271966013,1.10115880999389,0.893811366596314,0.768032666281217,0.659431438650969,1.18933936683133,2.08365348222704,1.3959149950069,0,0.61119299110724,1.47314292736834,2.56269025438385,3.72798891650601,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0.884610551949874,0.161766849947409,0,0,0,2.34224637609238,2.09446706813455,0,0,0,0,3.89455662452539,16.0125210986519,4.14659361972453,1.39059456153821,0.767146371990992,1.87009240103604,2.27137768294861,0,0,0,0.631325567659422,0,0,0,0.30140963567143,0,0.896796041993948,0.655912071918102,0.776110112217047,0.431135985865684,0.567318240503458,0,0.43839146485515,0.556094498451196,0.696504333044333,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0.438599962275997,0.439100230582101,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0.379335801906163,0.913988100877831,1.1270773567308,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,1.44495530989013,1.64096361229084,0,1.76729649043061,0,0,0.646270193198397,0,0,0,0,0,0,8.03303291054518,0,0,0,0,0,0.485561272309963,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.428674070063185,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.32977250588296,0.322928853391811,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0.387479470433193,0.337912250981556,0,0,0,0,0.576060012515731,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0.0962118416403295,0,0.680191150845634,0,0,0,0,0,0,0.643105137237198,0,0.564751842617067,0.920650473014354,0.572895513439397,1.03111909406213,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.31136204275253,0.798049746802062,0.682934423016537,0.729320151204882,0,0.367687016900028,0.44449345560323,0.618105171716683,0,0.252697211763798,0.25347929989024,0,0.842773567228942,0.640251524048693,0.804096565378586,0.476293691283074,1.0429589335037,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.70990322463735,0.953744759789284,0.581385666529314,0.752875043322645,0.423073039458382,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0.474540072496697,0.689531376628944,0,0.619747364743864,0.771626443924566,0.499621155875892,0.701794825336225,0.429742108096597,0.191288332068843,0.441182838239031,0 | |||
|short_description=p@chr16:7150004..7150009,+ | |||
}} |
Latest revision as of 01:14, 4 August 2015
Short description: | p@chr16:7150004..7150009, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:7150004..7150009, + |
Coexpression cluster: | MCL_coexpression_mm9:1385 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.12e-24 | 23 |
neuroblast (sensu Vertebrata) | 3.12e-24 | 23 |
neuron | 5.11e-16 | 33 |
neuronal stem cell | 5.11e-16 | 33 |
neuroblast | 5.11e-16 | 33 |
electrically signaling cell | 5.11e-16 | 33 |
electrically responsive cell | 4.11e-13 | 39 |
electrically active cell | 4.11e-13 | 39 |
neural cell | 1.26e-11 | 43 |
ectodermal cell | 2.68e-11 | 44 |
neurectodermal cell | 2.68e-11 | 44 |
hippocampal neuron | 8.96e-11 | 3 |
granule cell | 1.12e-10 | 3 |
neuron of the ventral spinal cord | 3.09e-10 | 3 |