FFCP PHASE1:Mm9::chr7:125850861..125850866,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:125850861..125850866,-|id=chr7:125850861..125850866,-|ontology_enrichment_celltype=CL:0002563!1.14e-08!9;CL:0002251!1.14e-08!9;CL:0000239!5.94e-07!6;CL:0000677!5.94e-07!6;CL:0000212!5.94e-07!6;CL:0000584!5.94e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,2.18e-12,9;CL:0002251,2.18e-12,9;CL:0000239,1.68e-11,6;CL:0000677,1.68e-11,6;CL:0000584,1.68e-11,6;CL:0000075,1.05e-09,7;CL:0000066,9.78e-07,25;CL:0002076,9.89e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.81e-12!15;UBERON:0001242!5.36e-11!13;UBERON:0000060!5.36e-11!13;UBERON:0001262!5.36e-11!13;UBERON:0004786!5.36e-11!13;UBERON:0005409!1.40e-10!59;UBERON:0000160!2.40e-10!43;UBERON:0003350!1.14e-08!9;UBERON:0004808!1.14e-08!9;UBERON:0001277!1.14e-08!9;UBERON:0004119!1.04e-07!130;UBERON:0000925!1.04e-07!130;UBERON:0006595!1.04e-07!130;UBERON:0001007!1.06e-07!128;UBERON:0001555!1.06e-07!128;UBERON:0007026!1.06e-07!128;UBERON:0004923!5.16e-07!24;UBERON:0004921!6.00e-07!126;UBERON:0004185!6.00e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.49e-18,31;UBERON:0000344,5.27e-17,15;UBERON:0005409,1.03e-16,47;UBERON:0001242,1.17e-14,13;UBERON:0001262,1.17e-14,13;UBERON:0004786,1.17e-14,13;UBERON:0003350,2.18e-12,9;UBERON:0004808,2.18e-12,9;UBERON:0001277,2.18e-12,9;UBERON:0001007,5.35e-10,116;UBERON:0001555,5.35e-10,116;UBERON:0007026,5.35e-10,116;UBERON:0000485,8.30e-10,11;UBERON:0004119,1.13e-09,118;UBERON:0000925,1.13e-09,118;UBERON:0006595,1.13e-09,118;UBERON:0004923,2.32e-09,24;UBERON:0004921,8.92e-09,114;UBERON:0000014,1.55e-08,5;UBERON:0001003,1.55e-08,5;UBERON:0002097,1.55e-08,5;UBERON:0002199,1.55e-08,5;UBERON:0007029,1.55e-08,5;UBERON:0007376,1.55e-08,5;UBERON:0002416,1.55e-08,5;UBERON:0007383,1.55e-08,5|phase1_expression=0,17.7977457896074,13.1949779422965,44.1597748507972,33.5600139064053,3.86122325397347,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.43993180514066,1.83527424853736,4.01962374880514,4.73838195774982,7.97243560937789,1.14014051673824,1.26015064879965,0.665191531965914,0,0,0,3.46621943701529,0.664938581433969,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.91347103775248,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,5.59175283654366,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,1.74126083261083,2.88094990971121,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5121954981413,0,0,0,0,0.201683524623343,0.444756087689741,0.380451252225118,4.74529061544512,1.4822905925161,0.754005626400808,1.39269530428806,0.38992817423824,1.79763881730844,7.5648317456143,8.36393347668342,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61882975416512,0,0,0,0.234690248288502,0.670025029767263,2.61848004974615,3.70753930929818,1.26108115284953,1.55025282754142,0.797273843287435,1.80249646187312,0.863424909329478,1.3018415272336,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0,0,3.62934270539578,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,5.93590510589328,1.45317984026315,1.93001359770099,3.9392873521035,4.76008609260678,3.49777003955821,0,0,0,0,0,0,0,0,0,0,9.54670618015114,0,0,0.216010681643603,1.04544148007234,0.218362563746178,1.61837215661785,0.661227645802687,2.87931536182433,3.11075935900303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.403865799792591,0,0,0.292373642219257,0.0962118416403295,0.116876902181569,6.57518112484113,0,0,0.167884616364078,0,0,0.549454872801795,22.5086798033019,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.888986911206461,0.412070114477788,0,1.51618327058278,0.760437899670719,0.943131706930381,1.03005658216871,0.768301828858431,0.804096565378586,0.476293691283074,0,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,0.953744759789284,2.0348498328526,0.752875043322645,1.09998990259179,0.73171189149109,0.263069711437843,1.08643291076689,1.12228454331548,0.830445126869219,0.394017929502254,0.409231043169689,0.619747364743864,2.12197272079256,1.99848462350357,0.935726433781634,0.859484216193193,0.191288332068843,0.220591419119515,0.695603506861264|short_description=p@chr7:125850861..125850866,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:125850861..125850866,- | |||
|description=CAGE_peak_at_chr7:125850861..125850866,- | |||
|id=chr7:125850861..125850866,- | |||
|ontology_enrichment_celltype=CL:0002563!1.14e-08!9;CL:0002251!1.14e-08!9;CL:0000239!5.94e-07!6;CL:0000677!5.94e-07!6;CL:0000212!5.94e-07!6;CL:0000584!5.94e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.18e-12,9;CL:0002251,2.18e-12,9;CL:0000239,1.68e-11,6;CL:0000677,1.68e-11,6;CL:0000584,1.68e-11,6;CL:0000075,1.05e-09,7;CL:0000066,9.78e-07,25;CL:0002076,9.89e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.81e-12!15;UBERON:0001242!5.36e-11!13;UBERON:0000060!5.36e-11!13;UBERON:0001262!5.36e-11!13;UBERON:0004786!5.36e-11!13;UBERON:0005409!1.40e-10!59;UBERON:0000160!2.40e-10!43;UBERON:0003350!1.14e-08!9;UBERON:0004808!1.14e-08!9;UBERON:0001277!1.14e-08!9;UBERON:0004119!1.04e-07!130;UBERON:0000925!1.04e-07!130;UBERON:0006595!1.04e-07!130;UBERON:0001007!1.06e-07!128;UBERON:0001555!1.06e-07!128;UBERON:0007026!1.06e-07!128;UBERON:0004923!5.16e-07!24;UBERON:0004921!6.00e-07!126;UBERON:0004185!6.00e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.49e-18,31;UBERON:0000344,5.27e-17,15;UBERON:0005409,1.03e-16,47;UBERON:0001242,1.17e-14,13;UBERON:0001262,1.17e-14,13;UBERON:0004786,1.17e-14,13;UBERON:0003350,2.18e-12,9;UBERON:0004808,2.18e-12,9;UBERON:0001277,2.18e-12,9;UBERON:0001007,5.35e-10,116;UBERON:0001555,5.35e-10,116;UBERON:0007026,5.35e-10,116;UBERON:0000485,8.30e-10,11;UBERON:0004119,1.13e-09,118;UBERON:0000925,1.13e-09,118;UBERON:0006595,1.13e-09,118;UBERON:0004923,2.32e-09,24;UBERON:0004921,8.92e-09,114;UBERON:0000014,1.55e-08,5;UBERON:0001003,1.55e-08,5;UBERON:0002097,1.55e-08,5;UBERON:0002199,1.55e-08,5;UBERON:0007029,1.55e-08,5;UBERON:0007376,1.55e-08,5;UBERON:0002416,1.55e-08,5;UBERON:0007383,1.55e-08,5 | |||
|phase1_expression=0,17.7977457896074,13.1949779422965,44.1597748507972,33.5600139064053,3.86122325397347,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.43993180514066,1.83527424853736,4.01962374880514,4.73838195774982,7.97243560937789,1.14014051673824,1.26015064879965,0.665191531965914,0,0,0,3.46621943701529,0.664938581433969,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.91347103775248,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,5.59175283654366,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,1.74126083261083,2.88094990971121,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5121954981413,0,0,0,0,0.201683524623343,0.444756087689741,0.380451252225118,4.74529061544512,1.4822905925161,0.754005626400808,1.39269530428806,0.38992817423824,1.79763881730844,7.5648317456143,8.36393347668342,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61882975416512,0,0,0,0.234690248288502,0.670025029767263,2.61848004974615,3.70753930929818,1.26108115284953,1.55025282754142,0.797273843287435,1.80249646187312,0.863424909329478,1.3018415272336,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0,0,3.62934270539578,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,5.93590510589328,1.45317984026315,1.93001359770099,3.9392873521035,4.76008609260678,3.49777003955821,0,0,0,0,0,0,0,0,0,0,9.54670618015114,0,0,0.216010681643603,1.04544148007234,0.218362563746178,1.61837215661785,0.661227645802687,2.87931536182433,3.11075935900303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.403865799792591,0,0,0.292373642219257,0.0962118416403295,0.116876902181569,6.57518112484113,0,0,0.167884616364078,0,0,0.549454872801795,22.5086798033019,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.888986911206461,0.412070114477788,0,1.51618327058278,0.760437899670719,0.943131706930381,1.03005658216871,0.768301828858431,0.804096565378586,0.476293691283074,0,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,0.953744759789284,2.0348498328526,0.752875043322645,1.09998990259179,0.73171189149109,0.263069711437843,1.08643291076689,1.12228454331548,0.830445126869219,0.394017929502254,0.409231043169689,0.619747364743864,2.12197272079256,1.99848462350357,0.935726433781634,0.859484216193193,0.191288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p@chr7:125850861..125850866,- | |||
}} |
Latest revision as of 03:03, 4 August 2015
Short description: | p@chr7:125850861..125850866, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:125850861..125850866, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.18e-12 | 9 |
epithelial cell of alimentary canal | 2.18e-12 | 9 |
brush border epithelial cell | 1.68e-11 | 6 |
gut absorptive cell | 1.68e-11 | 6 |
enterocyte | 1.68e-11 | 6 |
columnar/cuboidal epithelial cell | 1.05e-09 | 7 |
epithelial cell | 9.78e-07 | 25 |
endo-epithelial cell | 9.89e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.49e-18 | 31 |
mucosa | 5.27e-17 | 15 |
gastrointestinal system | 1.03e-16 | 47 |
intestinal mucosa | 1.17e-14 | 13 |
wall of intestine | 1.17e-14 | 13 |
gastrointestinal system mucosa | 1.17e-14 | 13 |
epithelium of mucosa | 2.18e-12 | 9 |
gastrointestinal system epithelium | 2.18e-12 | 9 |
intestinal epithelium | 2.18e-12 | 9 |
digestive system | 5.35e-10 | 116 |
digestive tract | 5.35e-10 | 116 |
primitive gut | 5.35e-10 | 116 |
simple columnar epithelium | 8.30e-10 | 11 |
endoderm-derived structure | 1.13e-09 | 118 |
endoderm | 1.13e-09 | 118 |
presumptive endoderm | 1.13e-09 | 118 |
organ component layer | 2.32e-09 | 24 |
subdivision of digestive tract | 8.92e-09 | 114 |
zone of skin | 1.55e-08 | 5 |
skin epidermis | 1.55e-08 | 5 |
skin of body | 1.55e-08 | 5 |
integument | 1.55e-08 | 5 |
surface | 1.55e-08 | 5 |
outer epithelium | 1.55e-08 | 5 |
integumental system | 1.55e-08 | 5 |
enveloping layer of ectoderm | 1.55e-08 | 5 |