FFCP PHASE1:Mm9::chr17:14363558..14363576,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:14363558..14363576,+|id=chr17:14363558..14363576,+|ontology_enrichment_celltype=CL:0000239!1.40e-13!6;CL:0000677!1.40e-13!6;CL:0000212!1.40e-13!6;CL:0000584!1.40e-13!6;CL:0000075!1.60e-11!7;CL:0002563!1.93e-11!9;CL:0002251!1.93e-11!9;CL:0000473!1.54e-07!3;CL:0000627!1.54e-07!3;CL:0000682!1.54e-07!3;CL:0000066!4.00e-07!25|ontology_enrichment_celltype_v019_2=CL:0000682,2.79e-11,3;CL:0000239,1.79e-10,6;CL:0000677,1.79e-10,6;CL:0000584,1.79e-10,6;CL:0000075,5.52e-09,7;CL:0002563,5.41e-07,9;CL:0002251,5.41e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.76e-32!43;UBERON:0000344!3.73e-23!15;UBERON:0005409!1.10e-21!59;UBERON:0001242!2.22e-19!13;UBERON:0000060!2.22e-19!13;UBERON:0001262!2.22e-19!13;UBERON:0004786!2.22e-19!13;UBERON:0004923!2.81e-13!24;UBERON:0003350!1.93e-11!9;UBERON:0004808!1.93e-11!9;UBERON:0001277!1.93e-11!9;UBERON:0000485!3.75e-09!11;UBERON:0001007!4.97e-08!128;UBERON:0001555!4.97e-08!128;UBERON:0007026!4.97e-08!128;UBERON:0004119!8.40e-08!130;UBERON:0000925!8.40e-08!130;UBERON:0006595!8.40e-08!130;UBERON:0000331!9.29e-08!3;UBERON:0002116!9.29e-08!3;UBERON:0001204!9.29e-08!3;UBERON:0001168!9.29e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.32e-39,31;UBERON:0005409,8.72e-25,47;UBERON:0000344,5.54e-23,15;UBERON:0001242,1.75e-17,13;UBERON:0001262,1.75e-17,13;UBERON:0004786,1.75e-17,13;UBERON:0002108,2.67e-15,4;UBERON:0004923,1.01e-13,24;UBERON:0000331,1.23e-11,3;UBERON:0002116,1.23e-11,3;UBERON:0001204,1.23e-11,3;UBERON:0001168,1.23e-11,3;UBERON:0001007,3.93e-10,116;UBERON:0001555,3.93e-10,116;UBERON:0007026,3.93e-10,116;UBERON:0004119,6.80e-10,118;UBERON:0000925,6.80e-10,118;UBERON:0006595,6.80e-10,118;UBERON:0004921,4.15e-08,114;UBERON:0001962,1.00e-07,2;UBERON:0001961,1.00e-07,2;UBERON:0001744,1.00e-07,2;UBERON:0003350,5.41e-07,9;UBERON:0004808,5.41e-07,9;UBERON:0001277,5.41e-07,9|phase1_expression=0,4.88565570695105,2.27499619694768,7.56160528267075,5.50985302940982,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,2.2940928106717,2.29692785646008,3.4460959692726,2.15471232685889,4.18051522804023,4.28451220591882,1.99557459589774,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,3.43785736662608,0,0,0.128867461322093,0.403367049246685,0.667134131534611,2.28270751335071,2.84717436926707,4.28217282282428,1.75934646160189,1.79060824837036,0.974820435595601,1.79763881730844,2.59365659849633,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.99554007911642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.365855945745545,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr17:14363558..14363576,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:14363558..14363576,+ | |||
|description=CAGE_peak_at_chr17:14363558..14363576,+ | |||
|id=chr17:14363558..14363576,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.40e-13!6;CL:0000677!1.40e-13!6;CL:0000212!1.40e-13!6;CL:0000584!1.40e-13!6;CL:0000075!1.60e-11!7;CL:0002563!1.93e-11!9;CL:0002251!1.93e-11!9;CL:0000473!1.54e-07!3;CL:0000627!1.54e-07!3;CL:0000682!1.54e-07!3;CL:0000066!4.00e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.79e-11,3;CL:0000239,1.79e-10,6;CL:0000677,1.79e-10,6;CL:0000584,1.79e-10,6;CL:0000075,5.52e-09,7;CL:0002563,5.41e-07,9;CL:0002251,5.41e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.76e-32!43;UBERON:0000344!3.73e-23!15;UBERON:0005409!1.10e-21!59;UBERON:0001242!2.22e-19!13;UBERON:0000060!2.22e-19!13;UBERON:0001262!2.22e-19!13;UBERON:0004786!2.22e-19!13;UBERON:0004923!2.81e-13!24;UBERON:0003350!1.93e-11!9;UBERON:0004808!1.93e-11!9;UBERON:0001277!1.93e-11!9;UBERON:0000485!3.75e-09!11;UBERON:0001007!4.97e-08!128;UBERON:0001555!4.97e-08!128;UBERON:0007026!4.97e-08!128;UBERON:0004119!8.40e-08!130;UBERON:0000925!8.40e-08!130;UBERON:0006595!8.40e-08!130;UBERON:0000331!9.29e-08!3;UBERON:0002116!9.29e-08!3;UBERON:0001204!9.29e-08!3;UBERON:0001168!9.29e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.32e-39,31;UBERON:0005409,8.72e-25,47;UBERON:0000344,5.54e-23,15;UBERON:0001242,1.75e-17,13;UBERON:0001262,1.75e-17,13;UBERON:0004786,1.75e-17,13;UBERON:0002108,2.67e-15,4;UBERON:0004923,1.01e-13,24;UBERON:0000331,1.23e-11,3;UBERON:0002116,1.23e-11,3;UBERON:0001204,1.23e-11,3;UBERON:0001168,1.23e-11,3;UBERON:0001007,3.93e-10,116;UBERON:0001555,3.93e-10,116;UBERON:0007026,3.93e-10,116;UBERON:0004119,6.80e-10,118;UBERON:0000925,6.80e-10,118;UBERON:0006595,6.80e-10,118;UBERON:0004921,4.15e-08,114;UBERON:0001962,1.00e-07,2;UBERON:0001961,1.00e-07,2;UBERON:0001744,1.00e-07,2;UBERON:0003350,5.41e-07,9;UBERON:0004808,5.41e-07,9;UBERON:0001277,5.41e-07,9 | |||
|phase1_expression=0,4.88565570695105,2.27499619694768,7.56160528267075,5.50985302940982,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,2.2940928106717,2.29692785646008,3.4460959692726,2.15471232685889,4.18051522804023,4.28451220591882,1.99557459589774,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,3.43785736662608,0,0,0.128867461322093,0.403367049246685,0.667134131534611,2.28270751335071,2.84717436926707,4.28217282282428,1.75934646160189,1.79060824837036,0.974820435595601,1.79763881730844,2.59365659849633,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.99554007911642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.365855945745545,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr17:14363558..14363576,+ | |||
}} |
Latest revision as of 08:14, 4 August 2015
Short description: | p@chr17:14363558..14363576, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:14363558..14363576, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.79e-11 | 3 |
brush border epithelial cell | 1.79e-10 | 6 |
gut absorptive cell | 1.79e-10 | 6 |
enterocyte | 1.79e-10 | 6 |
columnar/cuboidal epithelial cell | 5.52e-09 | 7 |
intestinal epithelial cell | 5.41e-07 | 9 |
epithelial cell of alimentary canal | 5.41e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.32e-39 | 31 |
gastrointestinal system | 8.72e-25 | 47 |
mucosa | 5.54e-23 | 15 |
intestinal mucosa | 1.75e-17 | 13 |
wall of intestine | 1.75e-17 | 13 |
gastrointestinal system mucosa | 1.75e-17 | 13 |
small intestine | 2.67e-15 | 4 |
organ component layer | 1.01e-13 | 24 |
ileal mucosa | 1.23e-11 | 3 |
ileum | 1.23e-11 | 3 |
mucosa of small intestine | 1.23e-11 | 3 |
wall of small intestine | 1.23e-11 | 3 |
digestive system | 3.93e-10 | 116 |
digestive tract | 3.93e-10 | 116 |
primitive gut | 3.93e-10 | 116 |
endoderm-derived structure | 6.80e-10 | 118 |
endoderm | 6.80e-10 | 118 |
presumptive endoderm | 6.80e-10 | 118 |
subdivision of digestive tract | 4.15e-08 | 114 |
gut-associated lymphoid tissue | 1.00e-07 | 2 |
mucosa-associated lymphoid tissue | 1.00e-07 | 2 |
lymphoid tissue | 1.00e-07 | 2 |
epithelium of mucosa | 5.41e-07 | 9 |
gastrointestinal system epithelium | 5.41e-07 | 9 |
intestinal epithelium | 5.41e-07 | 9 |