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FFCP PHASE1:Mm9::chr19:7053625..7053649,-: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=491|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:7053625..7053649,-|id=chr19:7053625..7053649,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,2.10e-08,23;CL:0000337,2.10e-08,23;CL:0000540,2.25e-08,33;CL:0000047,2.25e-08,33;CL:0000031,2.25e-08,33;CL:0000404,2.25e-08,33;CL:0002319,8.63e-08,43;CL:0000393,1.19e-07,39;CL:0000211,1.19e-07,39;CL:0000221,1.58e-07,44;CL:0000133,1.58e-07,44;CL:0002614,1.94e-07,3;CL:0002610,2.23e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.28e-12!73;UBERON:0005743!2.28e-12!73;UBERON:0000073!1.40e-11!75;UBERON:0001016!1.40e-11!75;UBERON:0001049!8.62e-10!52;UBERON:0005068!8.62e-10!52;UBERON:0006241!8.62e-10!52;UBERON:0007135!8.62e-10!52;UBERON:0000955!2.49e-09!50;UBERON:0006238!2.49e-09!50;UBERON:0002616!8.11e-09!49;UBERON:0002346!1.44e-08!71;UBERON:0003075!1.44e-08!71;UBERON:0007284!1.44e-08!71;UBERON:0004121!1.63e-08!102;UBERON:0000924!1.63e-08!102;UBERON:0006601!1.63e-08!102;UBERON:0002020!3.79e-07!34;UBERON:0003076!9.60e-07!12;UBERON:0003057!9.60e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.33e-20,73;UBERON:0001016,3.60e-19,75;UBERON:0000073,8.23e-17,54;UBERON:0004121,2.07e-14,95;UBERON:0000924,2.07e-14,95;UBERON:0006601,2.07e-14,95;UBERON:0001049,3.24e-14,52;UBERON:0005068,3.24e-14,52;UBERON:0006241,3.24e-14,52;UBERON:0007135,3.24e-14,52;UBERON:0002346,1.84e-11,64;UBERON:0003075,1.84e-11,64;UBERON:0007284,1.84e-11,64;UBERON:0002020,1.27e-10,34;UBERON:0000955,1.72e-10,47;UBERON:0006238,1.72e-10,47;UBERON:0002616,1.83e-09,46;UBERON:0010371,2.67e-09,73;UBERON:0002950,2.90e-09,4;UBERON:0001891,2.90e-09,4;UBERON:0009616,2.90e-09,4;UBERON:0010286,2.90e-09,4;UBERON:0003076,4.54e-09,12;UBERON:0003057,4.54e-09,12;UBERON:0000025,1.34e-08,114;UBERON:0004111,3.22e-08,122;UBERON:0002240,7.83e-08,6;UBERON:0005174,7.83e-08,6;UBERON:0001137,7.83e-08,6;UBERON:0010314,1.29e-07,92;UBERON:0003080,1.47e-07,40;UBERON:0002038,1.94e-07,3;UBERON:0009663,1.94e-07,3;UBERON:0009661,1.94e-07,3;UBERON:0000125,1.94e-07,3;UBERON:0002308,1.94e-07,3;UBERON:0004684,2.23e-07,3;UBERON:0002275,2.23e-07,3;UBERON:0003528,5.27e-07,29;UBERON:0002791,5.27e-07,29;UBERON:0001893,5.27e-07,29;UBERON:0011216,9.22e-07,194|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0.171217968225505,0.0797721589953364,0.171200729931206,0,0.999329285446988,1.01237633694913,0,0,0.137114433605739,0.42438965179803,0.765389611359628,0.198581902401771,0.261199789138935,0,0,0,0.430761996159075,0.215471232685889,0.760093677825496,0.252030129759931,0.443461021310609,1.90509202037889,0.61506478758457,0,0.288851619751275,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.550640256485045,0.782391344348039,0.436050312760893,0.439372365468944,0.777719596297134,0.139986421625363,0,0.167782606057736,0.725362142011344,0,0.771778308107841,0.286533439938757,1.54701627683233,0.202316460859598,0.528990979272033,0,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,1.79760066311043,2.30530983192933,0.103689612308478,0.405017814995072,0.210324961351382,1.99955689082663,1.98781686856452,0.122490799214954,0.191690942036473,0,5.50579404996943,4.08599481872601,4.30098293117482,0.263772575460388,0.365950574409639,1.04182674111352,5.862842979029,6.19038871034848,3.20876320331301,1.76777151284201,1.28134512719193,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0.679971333707751,1.07940638327563,3.89865850468601,1.79210754838934,0.280888840263504,0.340860645156116,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0,0.253359865475099,0,0.45673551887624,0,1.03909497345377,0.173485326766136,0.304465478312141,0.461230994512117,0.60289056221049,0.470354828542819,0.502666365318702,0,0.433798070759735,0.884610551949874,0.970601099684455,0,0.484875253135222,0,0.878342391034642,1.04723353406728,0.510914110417183,0.599075622529601,0.599902730993408,0.381210681219194,3.14560342750128,2.28750301409313,0.251308704225729,1.56441888173049,1.79000820131231,2.70124457927428,4.54275536589721,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.0937017245597288,1.03481348295606,0.215567992932842,0,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,0,0,0,0,0.568326998791185,0,0.234526059981096,0.36012412292203,0,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0,0.219550115291051,0,0.630869845692382,0.102904612379284,0,0.264450566663544,0,0,0.38660238396628,0,0,0,0,0,0.502670417600539,0,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0.189709611372772,0.147610147979602,0.470996183524124,0.370191491765402,1.1858105083486,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0.72353147925725,0.50925170356284,1.1507845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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=491
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr19:7053625..7053649,-
|description=CAGE_peak_at_chr19:7053625..7053649,-
|id=chr19:7053625..7053649,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,2.10e-08,23;CL:0000337,2.10e-08,23;CL:0000540,2.25e-08,33;CL:0000047,2.25e-08,33;CL:0000031,2.25e-08,33;CL:0000404,2.25e-08,33;CL:0002319,8.63e-08,43;CL:0000393,1.19e-07,39;CL:0000211,1.19e-07,39;CL:0000221,1.58e-07,44;CL:0000133,1.58e-07,44;CL:0002614,1.94e-07,3;CL:0002610,2.23e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.28e-12!73;UBERON:0005743!2.28e-12!73;UBERON:0000073!1.40e-11!75;UBERON:0001016!1.40e-11!75;UBERON:0001049!8.62e-10!52;UBERON:0005068!8.62e-10!52;UBERON:0006241!8.62e-10!52;UBERON:0007135!8.62e-10!52;UBERON:0000955!2.49e-09!50;UBERON:0006238!2.49e-09!50;UBERON:0002616!8.11e-09!49;UBERON:0002346!1.44e-08!71;UBERON:0003075!1.44e-08!71;UBERON:0007284!1.44e-08!71;UBERON:0004121!1.63e-08!102;UBERON:0000924!1.63e-08!102;UBERON:0006601!1.63e-08!102;UBERON:0002020!3.79e-07!34;UBERON:0003076!9.60e-07!12;UBERON:0003057!9.60e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.33e-20,73;UBERON:0001016,3.60e-19,75;UBERON:0000073,8.23e-17,54;UBERON:0004121,2.07e-14,95;UBERON:0000924,2.07e-14,95;UBERON:0006601,2.07e-14,95;UBERON:0001049,3.24e-14,52;UBERON:0005068,3.24e-14,52;UBERON:0006241,3.24e-14,52;UBERON:0007135,3.24e-14,52;UBERON:0002346,1.84e-11,64;UBERON:0003075,1.84e-11,64;UBERON:0007284,1.84e-11,64;UBERON:0002020,1.27e-10,34;UBERON:0000955,1.72e-10,47;UBERON:0006238,1.72e-10,47;UBERON:0002616,1.83e-09,46;UBERON:0010371,2.67e-09,73;UBERON:0002950,2.90e-09,4;UBERON:0001891,2.90e-09,4;UBERON:0009616,2.90e-09,4;UBERON:0010286,2.90e-09,4;UBERON:0003076,4.54e-09,12;UBERON:0003057,4.54e-09,12;UBERON:0000025,1.34e-08,114;UBERON:0004111,3.22e-08,122;UBERON:0002240,7.83e-08,6;UBERON:0005174,7.83e-08,6;UBERON:0001137,7.83e-08,6;UBERON:0010314,1.29e-07,92;UBERON:0003080,1.47e-07,40;UBERON:0002038,1.94e-07,3;UBERON:0009663,1.94e-07,3;UBERON:0009661,1.94e-07,3;UBERON:0000125,1.94e-07,3;UBERON:0002308,1.94e-07,3;UBERON:0004684,2.23e-07,3;UBERON:0002275,2.23e-07,3;UBERON:0003528,5.27e-07,29;UBERON:0002791,5.27e-07,29;UBERON:0001893,5.27e-07,29;UBERON:0011216,9.22e-07,194
|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0.171217968225505,0.0797721589953364,0.171200729931206,0,0.999329285446988,1.01237633694913,0,0,0.137114433605739,0.42438965179803,0.765389611359628,0.198581902401771,0.261199789138935,0,0,0,0.430761996159075,0.215471232685889,0.760093677825496,0.252030129759931,0.443461021310609,1.90509202037889,0.61506478758457,0,0.288851619751275,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.550640256485045,0.782391344348039,0.436050312760893,0.439372365468944,0.777719596297134,0.139986421625363,0,0.167782606057736,0.725362142011344,0,0.771778308107841,0.286533439938757,1.54701627683233,0.202316460859598,0.528990979272033,0,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,1.79760066311043,2.30530983192933,0.103689612308478,0.405017814995072,0.210324961351382,1.99955689082663,1.98781686856452,0.122490799214954,0.191690942036473,0,5.50579404996943,4.08599481872601,4.30098293117482,0.263772575460388,0.365950574409639,1.04182674111352,5.862842979029,6.19038871034848,3.20876320331301,1.76777151284201,1.28134512719193,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0.679971333707751,1.07940638327563,3.89865850468601,1.79210754838934,0.280888840263504,0.340860645156116,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0,0.253359865475099,0,0.45673551887624,0,1.03909497345377,0.173485326766136,0.304465478312141,0.461230994512117,0.60289056221049,0.470354828542819,0.502666365318702,0,0.433798070759735,0.884610551949874,0.970601099684455,0,0.484875253135222,0,0.878342391034642,1.04723353406728,0.510914110417183,0.599075622529601,0.599902730993408,0.381210681219194,3.14560342750128,2.28750301409313,0.251308704225729,1.56441888173049,1.79000820131231,2.70124457927428,4.54275536589721,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.0937017245597288,1.03481348295606,0.215567992932842,0,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,0,0,0,0,0.568326998791185,0,0.234526059981096,0.36012412292203,0,0,0,0.232533944750408,0,0,0,0,0.162137619091711,0,0.219550115291051,0,0.630869845692382,0.102904612379284,0,0.264450566663544,0,0,0.38660238396628,0,0,0,0,0,0.502670417600539,0,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0.189709611372772,0.147610147979602,0.470996183524124,0.370191491765402,1.1858105083486,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0.72353147925725,0.50925170356284,1.15078454980324,0.810676133875177,0.274561413188081,2.87536413054709,0,0.624075346229121,0.757736633841335,1.61457672169721,0.482443521363367,0,0,0.162964976442026,0,0.469380496577004,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0,0,0,0.54390568381871,0.491764273019036,0,4.17431533968259,2.93029216480508,0.163934945376675,0.757412781613119,0.315508219416257,0.780877488593277,0.430846795465598,1.43381278771531,0.445597348164788,0,0.809621403349789,1.46127928955656,1.18586333383957,2.89189184779626,0.425820255624806,0.178065603667255,0,0,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,0.340439605753788,0.18006109403131,0.388076051348264,0,0,0.356737635204141,0.329098041204242,0.304464949114599,0.469343416127421,1.48282449604674,0.882113592219848,0.65954501176592,0.807322133479528,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,2.96680483216816,0.341741761595705,0,0.740778109478847,0.376736914009382,0.546776910884101,0,0.339956859987711,0.139951452323658,0.138199973804424,1.90934123603023,0.158167996790568,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.299033092087958,0.496375471371293,0,0.258319646955462,0.506868376472335,0,0.13020438484395,0.104859344425711,0,0.864090018773596,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0.240390899039938,0.295379054349154,0.403865799792591,0.0762068066549998,0.201652370273681,0.292373642219257,0.384847366561318,0.584384510907845,0,0.443971906748129,0,0.167884616364078,0,0.375364950902364,0,0,1.00314420807073,1.6942555278512,2.76195141904306,1.71868654031819,1.89038500578056,0,0.755393897389701,0.675022500231806,1.80128481289688,0.906284817968409,1.55328093525546,0.103787347584177,0,0.170733605754134,0.729320151204882,0.628839487883947,0.551530525350042,0,0,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.384150914429216,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0,0.883193520806384,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.376437521661322,0.25384382367503,0.73171189149109,0,0.543216455383447,0,0.593175090620871,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.701794825336225,0.644613162144895,0.191288332068843,0.220591419119515,0.695603506861264
|short_description=p@chr19:7053625..7053649,-
}}

Latest revision as of 12:57, 4 August 2015

Short description:p@chr19:7053625..7053649, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr19:7053625..7053649, -
Coexpression cluster:MCL_coexpression_mm9:491
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr19:7053625..7053649-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system6.33e-2073
nervous system3.60e-1975
regional part of nervous system8.23e-1754
ectoderm-derived structure2.07e-1495
ectoderm2.07e-1495
presumptive ectoderm2.07e-1495
neural tube3.24e-1452
neural rod3.24e-1452
future spinal cord3.24e-1452
neural keel3.24e-1452
neurectoderm1.84e-1164
neural plate1.84e-1164
presumptive neural plate1.84e-1164
gray matter1.27e-1034
brain1.72e-1047
future brain1.72e-1047
regional part of brain1.83e-0946
ecto-epithelium2.67e-0973
regional part of midbrain2.90e-094
midbrain2.90e-094
presumptive midbrain2.90e-094
midbrain neural tube2.90e-094
posterior neural tube4.54e-0912
chordal neural plate4.54e-0912
tube1.34e-08114
anatomical conduit3.22e-08122
spinal cord7.83e-086
dorsal region element7.83e-086
dorsum7.83e-086
structure with developmental contribution from neural crest1.29e-0792
anterior neural tube1.47e-0740
substantia nigra1.94e-073
telencephalic nucleus1.94e-073
midbrain nucleus1.94e-073
neural nucleus1.94e-073
nucleus of brain1.94e-073
raphe nuclei2.23e-073
reticular formation2.23e-073
brain grey matter5.27e-0729
regional part of telencephalon5.27e-0729
telencephalon5.27e-0729
organ system subdivision9.22e-07194
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