FFCP PHASE1:Mm9::chr5:82229760..82229765,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=724|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:82229760..82229765,+|id=chr5:82229760..82229765,+|ontology_enrichment_celltype=CL:0000117!9.36e-12!23;CL:0000337!9.36e-12!23;CL:0000221!7.84e-10!44;CL:0000133!7.84e-10!44;CL:0000540!2.07e-09!33;CL:0000047!2.07e-09!33;CL:0000031!2.07e-09!33;CL:0000404!2.07e-09!33;CL:0002319!3.02e-09!43;CL:0000393!4.21e-07!39;CL:0000211!4.21e-07!39;CL:0000055!6.10e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.71e-16,23;CL:0000337,8.71e-16,23;CL:0000221,5.97e-11,44;CL:0000133,5.97e-11,44;CL:0000540,4.36e-10,33;CL:0000047,4.36e-10,33;CL:0000031,4.36e-10,33;CL:0000404,4.36e-10,33;CL:0002319,8.75e-10,43;CL:0002614,9.40e-09,3;CL:0002612,2.45e-08,3;CL:0000393,4.37e-08,39;CL:0000211,4.37e-08,39;CL:0002610,5.02e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.19e-24!102;UBERON:0000924!6.19e-24!102;UBERON:0006601!6.19e-24!102;UBERON:0002346!3.49e-22!71;UBERON:0003075!3.49e-22!71;UBERON:0007284!3.49e-22!71;UBERON:0000073!4.27e-22!75;UBERON:0001016!4.27e-22!75;UBERON:0000033!5.36e-21!63;UBERON:0001017!1.41e-20!73;UBERON:0005743!1.41e-20!73;UBERON:0001049!6.38e-20!52;UBERON:0005068!6.38e-20!52;UBERON:0006241!6.38e-20!52;UBERON:0007135!6.38e-20!52;UBERON:0002020!7.61e-19!34;UBERON:0003056!9.30e-19!49;UBERON:0000955!1.11e-18!50;UBERON:0006238!1.11e-18!50;UBERON:0002616!2.08e-18!49;UBERON:0003080!1.55e-16!40;UBERON:0002780!6.66e-16!39;UBERON:0001890!6.66e-16!39;UBERON:0006240!6.66e-16!39;UBERON:0002791!2.31e-15!29;UBERON:0003528!2.31e-15!29;UBERON:0001893!2.31e-15!29;UBERON:0000153!2.47e-11!94;UBERON:0000956!1.16e-10!21;UBERON:0001869!1.16e-10!21;UBERON:0000203!1.16e-10!21;UBERON:0002619!2.22e-10!17;UBERON:0007811!2.68e-10!86;UBERON:0002021!9.54e-09!10;UBERON:0000411!9.54e-09!10;UBERON:0001950!9.54e-09!10;UBERON:0000025!6.70e-08!114;UBERON:0004111!1.31e-07!122;UBERON:0000475!2.44e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.64e-29,54;UBERON:0002020,1.09e-24,34;UBERON:0001016,1.28e-24,75;UBERON:0001049,2.41e-23,52;UBERON:0005068,2.41e-23,52;UBERON:0006241,2.41e-23,52;UBERON:0007135,2.41e-23,52;UBERON:0001017,1.31e-21,73;UBERON:0004121,1.75e-19,95;UBERON:0000924,1.75e-19,95;UBERON:0006601,1.75e-19,95;UBERON:0002021,9.00e-19,10;UBERON:0000411,9.00e-19,10;UBERON:0001950,9.00e-19,10;UBERON:0003528,2.81e-18,29;UBERON:0002791,2.81e-18,29;UBERON:0001893,2.81e-18,29;UBERON:0002616,4.54e-18,46;UBERON:0002346,7.49e-18,64;UBERON:0003075,7.49e-18,64;UBERON:0007284,7.49e-18,64;UBERON:0000955,1.41e-17,47;UBERON:0006238,1.41e-17,47;UBERON:0010371,1.95e-16,73;UBERON:0003080,1.59e-15,40;UBERON:0002619,3.04e-15,17;UBERON:0002780,2.99e-14,39;UBERON:0001890,2.99e-14,39;UBERON:0006240,2.99e-14,39;UBERON:0000956,3.79e-14,21;UBERON:0001869,3.79e-14,21;UBERON:0000203,3.79e-14,21;UBERON:0003056,6.96e-12,49;UBERON:0010314,8.70e-12,92;UBERON:0002950,1.97e-10,4;UBERON:0001891,1.97e-10,4;UBERON:0009616,1.97e-10,4;UBERON:0010286,1.97e-10,4;UBERON:0000025,4.21e-10,114;UBERON:0004111,5.50e-10,122;UBERON:0002038,9.40e-09,3;UBERON:0009663,9.40e-09,3;UBERON:0009661,9.40e-09,3;UBERON:0000125,9.40e-09,3;UBERON:0002308,9.40e-09,3;UBERON:0003076,1.04e-08,12;UBERON:0003057,1.04e-08,12;UBERON:0002257,2.45e-08,3;UBERON:0001948,3.34e-08,5;UBERON:0002315,3.34e-08,5;UBERON:0004684,5.02e-08,3;UBERON:0002275,5.02e-08,3;UBERON:0011216,5.73e-08,194;UBERON:0002240,7.98e-07,6;UBERON:0005174,7.98e-07,6;UBERON:0001137,7.98e-07,6|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0.809265843438391,2.64495489636016,0,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.405017814995072,0,1.71390590642282,0.441737081903227,0.367472397644862,0.479227355091182,1.83843757322004,2.20231761998777,2.68143409978894,2.4577045320999,0.263772575460388,2.37867873366265,0.52091337055676,3.35019598801657,3.37657566019008,7.63991238884051,2.06240009831567,2.98980529678116,4.84638559145781,1.66597625333005,7.63272757078534,0,0,0,0,0,0,0,0,0,0,2.11265129665021,0,0,0,0,0,0,0.11418387971906,0,0,0.520455980298408,0.304465478312141,0.230615497256059,0.60289056221049,0.117588707135705,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,1.25668024088073,0,0,0,0,1.19832511523858,0.457500602818626,0.879580464790051,1.56441888173049,3.58001640262463,0.41557608911912,1.1356888414743,0.509196819251581,0.248813941220186,0,0,0.520481771850815,0.459804208866946,0.180062129805349,0.753524089178575,0.204109497453984,0.768682321709099,0.562210347358373,0.517406741478031,0.431135985865684,0.189106080167819,0.175951124163949,0.43839146485515,1.11218899690239,0,0.61734640922383,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0,0,0,0.292399974850665,0,0,1.26173969138476,0.205809224758569,0,0,0.853153002140936,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.648414149624083,0.398282546508734,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.585400943573396,0.315270288212382,1.32878813789265,0.159454768657487,1.14704320301017,0.690739927463582,1.3018415272336,0,0,0,0.551873492609465,1.28440471990234,1.64096361229084,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0,0.395287777946524,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0.604647113929502,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0,0.857348140126369,0.354680467284547,0.713475270408282,0.658196082408484,0,0,0,0,0,0.161464426695906,0,0.238744688006273,0.492422699235184,0,0.370850604021019,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.756037385752609,0.209088296014469,0,0.539457385539283,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.645799117388655,1.01373675294467,0.469428954583016,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,2.76195141904306,4.01026859407578,3.09335728218638,0.685082519770642,2.2661816921691,2.70009000092722,1.80128481289688,1.81256963593682,1.55328093525546,0.207574695168353,0,0,0,0.209613162627982,0,0,0,0,0,0.50695859978048,0,0,0.0640251524048693,0.114870937911227,0.476293691283074,0.347652977834566,0.38581844092741,0,0.588795680537589,1.02860775715625,0.354951612318675,0,0.436039249896986,0.188218760830661,0,0.182927972872773,0.263069711437843,0.543216455383447,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr5:82229760..82229765,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=724 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:82229760..82229765,+ | |||
|description=CAGE_peak_at_chr5:82229760..82229765,+ | |||
|id=chr5:82229760..82229765,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.36e-12!23;CL:0000337!9.36e-12!23;CL:0000221!7.84e-10!44;CL:0000133!7.84e-10!44;CL:0000540!2.07e-09!33;CL:0000047!2.07e-09!33;CL:0000031!2.07e-09!33;CL:0000404!2.07e-09!33;CL:0002319!3.02e-09!43;CL:0000393!4.21e-07!39;CL:0000211!4.21e-07!39;CL:0000055!6.10e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.71e-16,23;CL:0000337,8.71e-16,23;CL:0000221,5.97e-11,44;CL:0000133,5.97e-11,44;CL:0000540,4.36e-10,33;CL:0000047,4.36e-10,33;CL:0000031,4.36e-10,33;CL:0000404,4.36e-10,33;CL:0002319,8.75e-10,43;CL:0002614,9.40e-09,3;CL:0002612,2.45e-08,3;CL:0000393,4.37e-08,39;CL:0000211,4.37e-08,39;CL:0002610,5.02e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.19e-24!102;UBERON:0000924!6.19e-24!102;UBERON:0006601!6.19e-24!102;UBERON:0002346!3.49e-22!71;UBERON:0003075!3.49e-22!71;UBERON:0007284!3.49e-22!71;UBERON:0000073!4.27e-22!75;UBERON:0001016!4.27e-22!75;UBERON:0000033!5.36e-21!63;UBERON:0001017!1.41e-20!73;UBERON:0005743!1.41e-20!73;UBERON:0001049!6.38e-20!52;UBERON:0005068!6.38e-20!52;UBERON:0006241!6.38e-20!52;UBERON:0007135!6.38e-20!52;UBERON:0002020!7.61e-19!34;UBERON:0003056!9.30e-19!49;UBERON:0000955!1.11e-18!50;UBERON:0006238!1.11e-18!50;UBERON:0002616!2.08e-18!49;UBERON:0003080!1.55e-16!40;UBERON:0002780!6.66e-16!39;UBERON:0001890!6.66e-16!39;UBERON:0006240!6.66e-16!39;UBERON:0002791!2.31e-15!29;UBERON:0003528!2.31e-15!29;UBERON:0001893!2.31e-15!29;UBERON:0000153!2.47e-11!94;UBERON:0000956!1.16e-10!21;UBERON:0001869!1.16e-10!21;UBERON:0000203!1.16e-10!21;UBERON:0002619!2.22e-10!17;UBERON:0007811!2.68e-10!86;UBERON:0002021!9.54e-09!10;UBERON:0000411!9.54e-09!10;UBERON:0001950!9.54e-09!10;UBERON:0000025!6.70e-08!114;UBERON:0004111!1.31e-07!122;UBERON:0000475!2.44e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.64e-29,54;UBERON:0002020,1.09e-24,34;UBERON:0001016,1.28e-24,75;UBERON:0001049,2.41e-23,52;UBERON:0005068,2.41e-23,52;UBERON:0006241,2.41e-23,52;UBERON:0007135,2.41e-23,52;UBERON:0001017,1.31e-21,73;UBERON:0004121,1.75e-19,95;UBERON:0000924,1.75e-19,95;UBERON:0006601,1.75e-19,95;UBERON:0002021,9.00e-19,10;UBERON:0000411,9.00e-19,10;UBERON:0001950,9.00e-19,10;UBERON:0003528,2.81e-18,29;UBERON:0002791,2.81e-18,29;UBERON:0001893,2.81e-18,29;UBERON:0002616,4.54e-18,46;UBERON:0002346,7.49e-18,64;UBERON:0003075,7.49e-18,64;UBERON:0007284,7.49e-18,64;UBERON:0000955,1.41e-17,47;UBERON:0006238,1.41e-17,47;UBERON:0010371,1.95e-16,73;UBERON:0003080,1.59e-15,40;UBERON:0002619,3.04e-15,17;UBERON:0002780,2.99e-14,39;UBERON:0001890,2.99e-14,39;UBERON:0006240,2.99e-14,39;UBERON:0000956,3.79e-14,21;UBERON:0001869,3.79e-14,21;UBERON:0000203,3.79e-14,21;UBERON:0003056,6.96e-12,49;UBERON:0010314,8.70e-12,92;UBERON:0002950,1.97e-10,4;UBERON:0001891,1.97e-10,4;UBERON:0009616,1.97e-10,4;UBERON:0010286,1.97e-10,4;UBERON:0000025,4.21e-10,114;UBERON:0004111,5.50e-10,122;UBERON:0002038,9.40e-09,3;UBERON:0009663,9.40e-09,3;UBERON:0009661,9.40e-09,3;UBERON:0000125,9.40e-09,3;UBERON:0002308,9.40e-09,3;UBERON:0003076,1.04e-08,12;UBERON:0003057,1.04e-08,12;UBERON:0002257,2.45e-08,3;UBERON:0001948,3.34e-08,5;UBERON:0002315,3.34e-08,5;UBERON:0004684,5.02e-08,3;UBERON:0002275,5.02e-08,3;UBERON:0011216,5.73e-08,194;UBERON:0002240,7.98e-07,6;UBERON:0005174,7.98e-07,6;UBERON:0001137,7.98e-07,6 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0.809265843438391,2.64495489636016,0,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.405017814995072,0,1.71390590642282,0.441737081903227,0.367472397644862,0.479227355091182,1.83843757322004,2.20231761998777,2.68143409978894,2.4577045320999,0.263772575460388,2.37867873366265,0.52091337055676,3.35019598801657,3.37657566019008,7.63991238884051,2.06240009831567,2.98980529678116,4.84638559145781,1.66597625333005,7.63272757078534,0,0,0,0,0,0,0,0,0,0,2.11265129665021,0,0,0,0,0,0,0.11418387971906,0,0,0.520455980298408,0.304465478312141,0.230615497256059,0.60289056221049,0.117588707135705,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,1.25668024088073,0,0,0,0,1.19832511523858,0.457500602818626,0.879580464790051,1.56441888173049,3.58001640262463,0.41557608911912,1.1356888414743,0.509196819251581,0.248813941220186,0,0,0.520481771850815,0.459804208866946,0.180062129805349,0.753524089178575,0.204109497453984,0.768682321709099,0.562210347358373,0.517406741478031,0.431135985865684,0.189106080167819,0.175951124163949,0.43839146485515,1.11218899690239,0,0.61734640922383,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0,0,0,0.292399974850665,0,0,1.26173969138476,0.205809224758569,0,0,0.853153002140936,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.648414149624083,0.398282546508734,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.585400943573396,0.315270288212382,1.32878813789265,0.159454768657487,1.14704320301017,0.690739927463582,1.3018415272336,0,0,0,0.551873492609465,1.28440471990234,1.64096361229084,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0,0.395287777946524,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0.604647113929502,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0,0.857348140126369,0.354680467284547,0.713475270408282,0.658196082408484,0,0,0,0,0,0.161464426695906,0,0.238744688006273,0.492422699235184,0,0.370850604021019,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.756037385752609,0.209088296014469,0,0.539457385539283,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.645799117388655,1.01373675294467,0.469428954583016,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,2.76195141904306,4.01026859407578,3.09335728218638,0.685082519770642,2.2661816921691,2.70009000092722,1.80128481289688,1.81256963593682,1.55328093525546,0.207574695168353,0,0,0,0.209613162627982,0,0,0,0,0,0.50695859978048,0,0,0.0640251524048693,0.114870937911227,0.476293691283074,0.347652977834566,0.38581844092741,0,0.588795680537589,1.02860775715625,0.354951612318675,0,0.436039249896986,0.188218760830661,0,0.182927972872773,0.263069711437843,0.543216455383447,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr5:82229760..82229765,+ | |||
}} |
Latest revision as of 15:37, 4 August 2015
Short description: | p@chr5:82229760..82229765, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:82229760..82229765, + |
Coexpression cluster: | MCL_coexpression_mm9:724 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.71e-16 | 23 |
neuroblast (sensu Vertebrata) | 8.71e-16 | 23 |
ectodermal cell | 5.97e-11 | 44 |
neurectodermal cell | 5.97e-11 | 44 |
neuron | 4.36e-10 | 33 |
neuronal stem cell | 4.36e-10 | 33 |
neuroblast | 4.36e-10 | 33 |
electrically signaling cell | 4.36e-10 | 33 |
neural cell | 8.75e-10 | 43 |
neuron of the substantia nigra | 9.40e-09 | 3 |
neuron of the ventral spinal cord | 2.45e-08 | 3 |
electrically responsive cell | 4.37e-08 | 39 |
electrically active cell | 4.37e-08 | 39 |
raphe nuclei neuron | 5.02e-08 | 3 |