FFCP PHASE1:Mm9::chr12:16660410..16660434,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=491|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:16660410..16660434,+|id=chr12:16660410..16660434,+|ontology_enrichment_celltype=CL:0002319!3.24e-08!43;CL:0000221!6.71e-08!44;CL:0000133!6.71e-08!44;CL:0000055!4.68e-07!50;CL:0002453!6.18e-07!8|ontology_enrichment_celltype_v019_2=CL:0002614,1.30e-08,3;CL:0002319,1.35e-08,43;CL:0000117,1.46e-08,23;CL:0000337,1.46e-08,23;CL:0002610,1.54e-08,3;CL:0000221,2.52e-08,44;CL:0000133,2.52e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.18e-25!73;UBERON:0005743!5.18e-25!73;UBERON:0000073!5.53e-24!75;UBERON:0001016!5.53e-24!75;UBERON:0000955!3.56e-21!50;UBERON:0006238!3.56e-21!50;UBERON:0001049!4.83e-21!52;UBERON:0005068!4.83e-21!52;UBERON:0006241!4.83e-21!52;UBERON:0007135!4.83e-21!52;UBERON:0002616!4.14e-20!49;UBERON:0004121!1.75e-19!102;UBERON:0000924!1.75e-19!102;UBERON:0006601!1.75e-19!102;UBERON:0000033!6.71e-19!63;UBERON:0002020!3.11e-17!34;UBERON:0002346!2.36e-16!71;UBERON:0003075!2.36e-16!71;UBERON:0007284!2.36e-16!71;UBERON:0002791!5.14e-14!29;UBERON:0003528!5.14e-14!29;UBERON:0001893!5.14e-14!29;UBERON:0002021!1.20e-12!10;UBERON:0000411!1.20e-12!10;UBERON:0001950!1.20e-12!10;UBERON:0003056!1.33e-12!49;UBERON:0003080!1.63e-12!40;UBERON:0002619!2.82e-12!17;UBERON:0000025!1.26e-11!114;UBERON:0002780!1.54e-11!39;UBERON:0001890!1.54e-11!39;UBERON:0006240!1.54e-11!39;UBERON:0007811!5.88e-11!86;UBERON:0000956!6.87e-11!21;UBERON:0001869!6.87e-11!21;UBERON:0000203!6.87e-11!21;UBERON:0003076!4.03e-10!12;UBERON:0003057!4.03e-10!12;UBERON:0004111!4.72e-10!122;UBERON:0002298!1.10e-09!6;UBERON:0000153!3.68e-09!94;UBERON:0002950!4.52e-07!4;UBERON:0001891!4.52e-07!4;UBERON:0009616!4.52e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.22e-36,73;UBERON:0001016,9.14e-35,75;UBERON:0000073,1.24e-34,54;UBERON:0001049,1.15e-30,52;UBERON:0005068,1.15e-30,52;UBERON:0006241,1.15e-30,52;UBERON:0007135,1.15e-30,52;UBERON:0004121,8.60e-26,95;UBERON:0000924,8.60e-26,95;UBERON:0006601,8.60e-26,95;UBERON:0000955,5.44e-25,47;UBERON:0006238,5.44e-25,47;UBERON:0002346,1.26e-23,64;UBERON:0003075,1.26e-23,64;UBERON:0007284,1.26e-23,64;UBERON:0002616,2.18e-23,46;UBERON:0002020,5.34e-22,34;UBERON:0002021,4.44e-20,10;UBERON:0000411,4.44e-20,10;UBERON:0001950,4.44e-20,10;UBERON:0010371,7.25e-20,73;UBERON:0003528,1.04e-16,29;UBERON:0002791,1.04e-16,29;UBERON:0001893,1.04e-16,29;UBERON:0003080,1.31e-16,40;UBERON:0003076,1.82e-16,12;UBERON:0003057,1.82e-16,12;UBERON:0002780,4.21e-15,39;UBERON:0001890,4.21e-15,39;UBERON:0006240,4.21e-15,39;UBERON:0010314,2.38e-14,92;UBERON:0002619,1.75e-13,17;UBERON:0003056,1.06e-12,49;UBERON:0000956,1.11e-12,21;UBERON:0001869,1.11e-12,21;UBERON:0000203,1.11e-12,21;UBERON:0000025,3.30e-11,114;UBERON:0002950,8.95e-11,4;UBERON:0001891,8.95e-11,4;UBERON:0009616,8.95e-11,4;UBERON:0010286,8.95e-11,4;UBERON:0004111,5.10e-10,122;UBERON:0004733,4.74e-09,6;UBERON:0004732,4.74e-09,6;UBERON:0002028,4.74e-09,6;UBERON:0007277,4.74e-09,6;UBERON:0002240,6.29e-09,6;UBERON:0005174,6.29e-09,6;UBERON:0001137,6.29e-09,6;UBERON:0002038,1.30e-08,3;UBERON:0009663,1.30e-08,3;UBERON:0009661,1.30e-08,3;UBERON:0000125,1.30e-08,3;UBERON:0002308,1.30e-08,3;UBERON:0004684,1.54e-08,3;UBERON:0002275,1.54e-08,3;UBERON:0011216,1.59e-08,194;UBERON:0001948,6.83e-07,5;UBERON:0002315,6.83e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45062890951116,0.219686182734472,0.388859798148567,3.77963338388479,2.87505128729943,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,16.7776061890307,53.7905627450176,0,0,0,26.5655415495537,22.5285911770646,0,0.0958454710182364,0,137.644851249236,68.057351199405,72.0414640971782,0,0.182975287204819,0,102.739343632508,107.487658516051,86.6366064894513,5.00868595305235,3.41692033917847,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,14.0534782565543,14.4518227701284,0,0,0,0,54.6735833827603,40.7175536508578,0,29.0286614721102,25.0601148183724,59.0118046549151,40.0735919777361,0,0.870848794270651,3.53811861807145,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,27.3376933133365,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502518772325447,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,62.1330783252755,53.4485290860447,0,0,0,0,0,0,0.222798674082394,0.566153061577665,0,0,0,26.0270266301664,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,54.8858893951109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.942555278512,20.714635642823,17.1868654031819,14.4356673168698,23.9778881919725,21.9064230243013,26.3258775090404,21.6154177547626,20.3914084042892,31.583379016861,0,0,0.170733605754134,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0.214871054048298,0,0.882365676478062,0.695603506861264|short_description=p@chr12:16660410..16660434,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=491 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:16660410..16660434,+ | |||
|description=CAGE_peak_at_chr12:16660410..16660434,+ | |||
|id=chr12:16660410..16660434,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.24e-08!43;CL:0000221!6.71e-08!44;CL:0000133!6.71e-08!44;CL:0000055!4.68e-07!50;CL:0002453!6.18e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.30e-08,3;CL:0002319,1.35e-08,43;CL:0000117,1.46e-08,23;CL:0000337,1.46e-08,23;CL:0002610,1.54e-08,3;CL:0000221,2.52e-08,44;CL:0000133,2.52e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.18e-25!73;UBERON:0005743!5.18e-25!73;UBERON:0000073!5.53e-24!75;UBERON:0001016!5.53e-24!75;UBERON:0000955!3.56e-21!50;UBERON:0006238!3.56e-21!50;UBERON:0001049!4.83e-21!52;UBERON:0005068!4.83e-21!52;UBERON:0006241!4.83e-21!52;UBERON:0007135!4.83e-21!52;UBERON:0002616!4.14e-20!49;UBERON:0004121!1.75e-19!102;UBERON:0000924!1.75e-19!102;UBERON:0006601!1.75e-19!102;UBERON:0000033!6.71e-19!63;UBERON:0002020!3.11e-17!34;UBERON:0002346!2.36e-16!71;UBERON:0003075!2.36e-16!71;UBERON:0007284!2.36e-16!71;UBERON:0002791!5.14e-14!29;UBERON:0003528!5.14e-14!29;UBERON:0001893!5.14e-14!29;UBERON:0002021!1.20e-12!10;UBERON:0000411!1.20e-12!10;UBERON:0001950!1.20e-12!10;UBERON:0003056!1.33e-12!49;UBERON:0003080!1.63e-12!40;UBERON:0002619!2.82e-12!17;UBERON:0000025!1.26e-11!114;UBERON:0002780!1.54e-11!39;UBERON:0001890!1.54e-11!39;UBERON:0006240!1.54e-11!39;UBERON:0007811!5.88e-11!86;UBERON:0000956!6.87e-11!21;UBERON:0001869!6.87e-11!21;UBERON:0000203!6.87e-11!21;UBERON:0003076!4.03e-10!12;UBERON:0003057!4.03e-10!12;UBERON:0004111!4.72e-10!122;UBERON:0002298!1.10e-09!6;UBERON:0000153!3.68e-09!94;UBERON:0002950!4.52e-07!4;UBERON:0001891!4.52e-07!4;UBERON:0009616!4.52e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.22e-36,73;UBERON:0001016,9.14e-35,75;UBERON:0000073,1.24e-34,54;UBERON:0001049,1.15e-30,52;UBERON:0005068,1.15e-30,52;UBERON:0006241,1.15e-30,52;UBERON:0007135,1.15e-30,52;UBERON:0004121,8.60e-26,95;UBERON:0000924,8.60e-26,95;UBERON:0006601,8.60e-26,95;UBERON:0000955,5.44e-25,47;UBERON:0006238,5.44e-25,47;UBERON:0002346,1.26e-23,64;UBERON:0003075,1.26e-23,64;UBERON:0007284,1.26e-23,64;UBERON:0002616,2.18e-23,46;UBERON:0002020,5.34e-22,34;UBERON:0002021,4.44e-20,10;UBERON:0000411,4.44e-20,10;UBERON:0001950,4.44e-20,10;UBERON:0010371,7.25e-20,73;UBERON:0003528,1.04e-16,29;UBERON:0002791,1.04e-16,29;UBERON:0001893,1.04e-16,29;UBERON:0003080,1.31e-16,40;UBERON:0003076,1.82e-16,12;UBERON:0003057,1.82e-16,12;UBERON:0002780,4.21e-15,39;UBERON:0001890,4.21e-15,39;UBERON:0006240,4.21e-15,39;UBERON:0010314,2.38e-14,92;UBERON:0002619,1.75e-13,17;UBERON:0003056,1.06e-12,49;UBERON:0000956,1.11e-12,21;UBERON:0001869,1.11e-12,21;UBERON:0000203,1.11e-12,21;UBERON:0000025,3.30e-11,114;UBERON:0002950,8.95e-11,4;UBERON:0001891,8.95e-11,4;UBERON:0009616,8.95e-11,4;UBERON:0010286,8.95e-11,4;UBERON:0004111,5.10e-10,122;UBERON:0004733,4.74e-09,6;UBERON:0004732,4.74e-09,6;UBERON:0002028,4.74e-09,6;UBERON:0007277,4.74e-09,6;UBERON:0002240,6.29e-09,6;UBERON:0005174,6.29e-09,6;UBERON:0001137,6.29e-09,6;UBERON:0002038,1.30e-08,3;UBERON:0009663,1.30e-08,3;UBERON:0009661,1.30e-08,3;UBERON:0000125,1.30e-08,3;UBERON:0002308,1.30e-08,3;UBERON:0004684,1.54e-08,3;UBERON:0002275,1.54e-08,3;UBERON:0011216,1.59e-08,194;UBERON:0001948,6.83e-07,5;UBERON:0002315,6.83e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45062890951116,0.219686182734472,0.388859798148567,3.77963338388479,2.87505128729943,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,16.7776061890307,53.7905627450176,0,0,0,26.5655415495537,22.5285911770646,0,0.0958454710182364,0,137.644851249236,68.057351199405,72.0414640971782,0,0.182975287204819,0,102.739343632508,107.487658516051,86.6366064894513,5.00868595305235,3.41692033917847,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,14.0534782565543,14.4518227701284,0,0,0,0,54.6735833827603,40.7175536508578,0,29.0286614721102,25.0601148183724,59.0118046549151,40.0735919777361,0,0.870848794270651,3.53811861807145,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,27.3376933133365,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502518772325447,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,62.1330783252755,53.4485290860447,0,0,0,0,0,0,0.222798674082394,0.566153061577665,0,0,0,26.0270266301664,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,54.8858893951109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.942555278512,20.714635642823,17.1868654031819,14.4356673168698,23.9778881919725,21.9064230243013,26.3258775090404,21.6154177547626,20.3914084042892,31.583379016861,0,0,0.170733605754134,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0.214871054048298,0,0.882365676478062,0.695603506861264 | |||
|short_description=p@chr12:16660410..16660434,+ | |||
}} |
Latest revision as of 21:17, 4 August 2015
Short description: | p@chr12:16660410..16660434, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:16660410..16660434, + |
Coexpression cluster: | MCL_coexpression_mm9:491 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.30e-08 | 3 |
neural cell | 1.35e-08 | 43 |
CNS neuron (sensu Vertebrata) | 1.46e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.46e-08 | 23 |
raphe nuclei neuron | 1.54e-08 | 3 |
ectodermal cell | 2.52e-08 | 44 |
neurectodermal cell | 2.52e-08 | 44 |