FFCP PHASE1:Mm9::chr1:146096179..146096197,-: Difference between revisions
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{{FFCP|EntrezGene=50778|HGNC=|MCL_coexpression_id=34|UniProt=Q9JL25|association_with_transcript=0bp_to_ENSMUST00000027604,ENSMUST00000167317,ENSMUST00000169042,ENSMUST00000170870,uc007cxk.1_5end|description=CAGE_peak_1_at_Rgs1_5end|id=chr1:146096179..146096197,-|ontology_enrichment_celltype=CL:0000988!6.01e-13!32;CL:0002032!6.01e-13!32;CL:0000037!6.01e-13!32;CL:0000566!6.01e-13!32;CL:0000837!6.01e-13!32;CL:0002031!4.70e-10!25;CL:0002320!7.53e-10!46;CL:0000134!7.53e-10!46;CL:0000738!8.84e-09!17;CL:0002087!8.84e-09!17;CL:0000838!1.55e-08!12;CL:0000084!5.27e-08!11;CL:0000827!5.27e-08!11;CL:0000542!2.98e-07!13;CL:0000051!2.98e-07!13;CL:0000791!3.49e-07!9;CL:0000789!3.49e-07!9;CL:0002420!3.49e-07!9;CL:0002419!3.49e-07!9;CL:0000790!3.49e-07!9;CL:0000049!4.95e-07!19;CL:0000219!5.51e-07!54|ontology_enrichment_celltype_v019_2=CL:0000988,1.93e-17,32;CL:0002032,1.93e-17,32;CL:0000037,1.93e-17,32;CL:0000837,1.93e-17,32;CL:0002320,1.18e-14,46;CL:0000134,1.18e-14,46;CL:0002031,2.24e-13,25;CL:0000219,2.05e-11,54;CL:0000738,4.61e-11,17;CL:0002087,4.61e-11,17;CL:0000838,2.38e-10,12;CL:0000084,1.11e-09,11;CL:0000827,1.11e-09,11;CL:0000049,1.71e-09,19;CL:0000542,3.78e-09,13;CL:0000051,3.78e-09,13;CL:0000791,1.19e-08,9;CL:0000789,1.19e-08,9;CL:0002420,1.19e-08,9;CL:0002419,1.19e-08,9;CL:0000790,1.19e-08,9;CL:0000624,8.08e-08,8;CL:0000763,3.95e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.64e-16!48;UBERON:0002405!4.22e-16!70;UBERON:0002390!1.18e-14!45;UBERON:0003061!1.18e-14!45;UBERON:0003081!2.87e-10!88;UBERON:0002384!7.53e-10!46;UBERON:0002371!8.49e-10!16;UBERON:0004119!2.83e-09!130;UBERON:0000925!2.83e-09!130;UBERON:0006595!2.83e-09!130;UBERON:0001007!8.30e-09!128;UBERON:0001555!8.30e-09!128;UBERON:0007026!8.30e-09!128;UBERON:0001474!1.75e-08!22;UBERON:0004765!1.75e-08!22;UBERON:0001434!1.75e-08!22;UBERON:0004921!3.57e-08!126;UBERON:0004185!3.57e-08!126;UBERON:0000926!2.82e-07!193;UBERON:0004120!2.82e-07!193;UBERON:0006603!2.82e-07!193;UBERON:0005057!3.11e-07!51;UBERON:0002204!5.58e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.00e-20,48;UBERON:0002405,2.00e-20,48;UBERON:0002390,1.66e-18,45;UBERON:0003061,1.66e-18,45;UBERON:0002384,1.18e-14,46;UBERON:0002371,6.16e-12,16;UBERON:0004119,1.20e-11,118;UBERON:0000925,1.20e-11,118;UBERON:0006595,1.20e-11,118;UBERON:0001007,4.76e-11,116;UBERON:0001555,4.76e-11,116;UBERON:0007026,4.76e-11,116;UBERON:0004921,3.13e-10,114;UBERON:0000077,3.34e-09,35;UBERON:0001474,5.81e-09,22;UBERON:0004765,5.81e-09,22;UBERON:0001434,5.81e-09,22;UBERON:0003081,1.16e-08,87;UBERON:0002204,2.08e-08,32;UBERON:0004177,2.26e-08,29;UBERON:0005057,2.26e-08,29;UBERON:0003408,1.80e-07,24;UBERON:0002370,3.39e-07,23;UBERON:0000974,3.39e-07,23;UBERON:0004807,3.39e-07,23;UBERON:0005058,3.39e-07,23;UBERON:0003351,3.39e-07,23;UBERON:0009113,3.39e-07,23;UBERON:0003295,3.39e-07,23;UBERON:0009722,3.39e-07,23;UBERON:0005562,3.39e-07,23;UBERON:0007690,3.39e-07,23;UBERON:0000926,4.96e-07,120;UBERON:0004120,4.96e-07,120;UBERON:0006603,4.96e-07,120|phase1_expression=6.08565618998217,1.39590163055744,0.454999239389536,0.60492842261366,0.500895729946347,0,1.40167584357315,481.888243083963,164.863593639602,104.860907792253,60.6111607518288,50.8148652800293,22.7696970808504,22.5544638241013,16.3223783289675,18.2227740650843,75.5526828378398,24.4483178152634,29.8909465260511,29.7072756258621,1.02051948181284,16.0851340945434,8.097193463307,7.67963629408352,11.2410547722913,1.72269589234506,1.29228598847722,0.861884930743556,3.23039813075836,5.29263272495855,5.76499327703792,0,0,0,0,0.332469290716985,1.22501613757421,5.02237956884289,5.4693474116666,1.57057123192139,22.9410280332096,13.6609096991689,5.34061388334269,0,0,0,0,0,0,0,0,0,20.4694779390438,146.523152686292,117.632829699862,2.57259436035947,5.44413535883638,8.25075347643908,0,0,0,0,0,16.1981949110652,22.7439263390404,16.3410426437603,5.69240209984969,3.45796474789399,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,22.2635008399561,0.755715601067855,2.6087803983151,33.5565312022741,0.679971333707751,0,7.14754059192436,0,2.38755514223978,0,0,0,0,0,0,0,0,0,0,9.1347103775248,53.8590797986117,8.90652834388949,0.173485326766136,0,0.230615497256059,0.452167921657868,4.35078216402108,0.502666365318702,1.23597483867187,0.578397427679647,4.42305275974937,0.647067399789637,0.662524555381181,0.484875253135222,16.775258509631,0,0,13.2837668708468,537.011388035535,398.335413379623,322.504236311438,0,0.457500602818626,0,0.173824320192276,0.511430914660661,0,0,0.712875546952214,0.622034853050465,1.51633655060205,1.47309299120532,0,0,0,0,0.748401490664606,0,0.187403449119458,0,0,0.756424320671277,0.175951124163949,0,0.834141747676794,1.0447564995665,1.85203922767149,0,74.4345978552029,109.630208430869,77.5766353349968,0.828503090142008,1.17263029990548,0,0.473489471170421,0.983821158737019,0.308534225774757,0.232533944750408,0.268273401399619,1.28441876603886,0.493679549740441,0,0.162137619091711,0.292399974850665,0.219550115291051,0.402619256281115,0,0.102904612379284,19.1642894130603,4.49565963328025,0,0,0.257734922644187,0.403367049246685,0.889512175379481,1.33157938278791,5.69434873853414,4.28217282282428,10.304743560811,14.1259095149217,12.2827374885046,7.19055526923377,10.1584883441106,12.9441827615339,0.189667900953082,0,0,0,0.193952487167626,0.701358198903186,0.316182685621286,0.442830443938806,0.156998727841375,0,1.1858105083486,0.166845105716094,0.786235980452812,0.224862112384854,0,0.482354319504834,1.52775511068852,2.5892652370573,17.5106044917038,6.58947391651396,1.43768206527355,4.09355042435354,2.18426371180192,2.27320990152401,0.538192240565737,5.30687873499704,2.03228509183265,0,2.28150967018836,0.169745085775188,0,0.167506257441816,0,0.390267295715598,1.41871629695572,1.32878813789265,2.07291199254733,3.27726629431476,2.93564469172023,2.31438493730419,46.7452980211744,15.7732648307426,2.95058563811422,2.75936746304733,0,0.35163505977661,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,2.41298144854057,0,0.488660878060728,7.4236555337641,0,0,0.302323556964751,0.754420319023592,0,0.614870295887855,1.29214146584111,0.363533729477506,0.712994756769443,13.9056173491759,0,0,1.02131881726136,0,0,0,0,0.178368817602071,0,0.304464949114599,9.62154003061212,1.48282449604674,0.441056796109924,1.81374878235628,3.22928853391811,0.422190474497091,0.835606408021955,0.492422699235184,11.0762717919343,0.370850604021019,11.619219894254,0.619160603889667,2.96311243791539,3.76736914009382,6.01454601972511,4.80434163733698,2124.3904180632,1957.500963651,1369.69994037564,6.68269432610579,0.158167996790568,0,0.108005340821801,0.209088296014469,0.436725127492355,2.69728692769641,3.71940550764012,5.23511883968059,17.498021394392,3.72803587852155,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.168956125490778,0.352071715937262,0,0.209718688851422,0,0,6.63623353319174,1.21635129174099,3.49217254360413,5.06691209613401,2.14832034800978,2.18549490259391,3.96644983415897,4.13530676088816,4.84638959751109,4.19137436602499,2.21817607301049,6.04238860586465,3.94468550725351,4.9088298916259,0.453460767230423,0,0,0,3.67060228661162,21.2081197259836,7.14291334642334,4.07299920250225,2.00628841614145,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0,0.183843508450014,0,0,0.64183841918363,1.26348605881899,0.760437899670719,0.188626341386076,0.37456602987953,0.576226371643824,0.516919220600519,0,0.347652977834566,0.192909220463705,0.412085900803307,0.735994600671987,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.376437521661322,0.507687647350059,0.365855945745545,0.789209134313529,0.679020569229309,0,0.237270036248348,0.29551344712669,0.409231043169689,0,0.578719832943424,0,0.467863216890817,1.50409737833809,0.765153328275374,0,0.463735671240843|short_description=p1@Rgs1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50778 | |||
|HGNC= | |||
|MCL_coexpression_id=34 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JL25 | |||
|association_with_transcript=0bp_to_ENSMUST00000027604,ENSMUST00000167317,ENSMUST00000169042,ENSMUST00000170870,uc007cxk.1_5end | |||
|cluster_id=chr1:146096179..146096197,- | |||
|description=CAGE_peak_1_at_Rgs1_5end | |||
|id=chr1:146096179..146096197,- | |||
|ontology_enrichment_celltype=CL:0000988!6.01e-13!32;CL:0002032!6.01e-13!32;CL:0000037!6.01e-13!32;CL:0000566!6.01e-13!32;CL:0000837!6.01e-13!32;CL:0002031!4.70e-10!25;CL:0002320!7.53e-10!46;CL:0000134!7.53e-10!46;CL:0000738!8.84e-09!17;CL:0002087!8.84e-09!17;CL:0000838!1.55e-08!12;CL:0000084!5.27e-08!11;CL:0000827!5.27e-08!11;CL:0000542!2.98e-07!13;CL:0000051!2.98e-07!13;CL:0000791!3.49e-07!9;CL:0000789!3.49e-07!9;CL:0002420!3.49e-07!9;CL:0002419!3.49e-07!9;CL:0000790!3.49e-07!9;CL:0000049!4.95e-07!19;CL:0000219!5.51e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.93e-17,32;CL:0002032,1.93e-17,32;CL:0000037,1.93e-17,32;CL:0000837,1.93e-17,32;CL:0002320,1.18e-14,46;CL:0000134,1.18e-14,46;CL:0002031,2.24e-13,25;CL:0000219,2.05e-11,54;CL:0000738,4.61e-11,17;CL:0002087,4.61e-11,17;CL:0000838,2.38e-10,12;CL:0000084,1.11e-09,11;CL:0000827,1.11e-09,11;CL:0000049,1.71e-09,19;CL:0000542,3.78e-09,13;CL:0000051,3.78e-09,13;CL:0000791,1.19e-08,9;CL:0000789,1.19e-08,9;CL:0002420,1.19e-08,9;CL:0002419,1.19e-08,9;CL:0000790,1.19e-08,9;CL:0000624,8.08e-08,8;CL:0000763,3.95e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.64e-16!48;UBERON:0002405!4.22e-16!70;UBERON:0002390!1.18e-14!45;UBERON:0003061!1.18e-14!45;UBERON:0003081!2.87e-10!88;UBERON:0002384!7.53e-10!46;UBERON:0002371!8.49e-10!16;UBERON:0004119!2.83e-09!130;UBERON:0000925!2.83e-09!130;UBERON:0006595!2.83e-09!130;UBERON:0001007!8.30e-09!128;UBERON:0001555!8.30e-09!128;UBERON:0007026!8.30e-09!128;UBERON:0001474!1.75e-08!22;UBERON:0004765!1.75e-08!22;UBERON:0001434!1.75e-08!22;UBERON:0004921!3.57e-08!126;UBERON:0004185!3.57e-08!126;UBERON:0000926!2.82e-07!193;UBERON:0004120!2.82e-07!193;UBERON:0006603!2.82e-07!193;UBERON:0005057!3.11e-07!51;UBERON:0002204!5.58e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.00e-20,48;UBERON:0002405,2.00e-20,48;UBERON:0002390,1.66e-18,45;UBERON:0003061,1.66e-18,45;UBERON:0002384,1.18e-14,46;UBERON:0002371,6.16e-12,16;UBERON:0004119,1.20e-11,118;UBERON:0000925,1.20e-11,118;UBERON:0006595,1.20e-11,118;UBERON:0001007,4.76e-11,116;UBERON:0001555,4.76e-11,116;UBERON:0007026,4.76e-11,116;UBERON:0004921,3.13e-10,114;UBERON:0000077,3.34e-09,35;UBERON:0001474,5.81e-09,22;UBERON:0004765,5.81e-09,22;UBERON:0001434,5.81e-09,22;UBERON:0003081,1.16e-08,87;UBERON:0002204,2.08e-08,32;UBERON:0004177,2.26e-08,29;UBERON:0005057,2.26e-08,29;UBERON:0003408,1.80e-07,24;UBERON:0002370,3.39e-07,23;UBERON:0000974,3.39e-07,23;UBERON:0004807,3.39e-07,23;UBERON:0005058,3.39e-07,23;UBERON:0003351,3.39e-07,23;UBERON:0009113,3.39e-07,23;UBERON:0003295,3.39e-07,23;UBERON:0009722,3.39e-07,23;UBERON:0005562,3.39e-07,23;UBERON:0007690,3.39e-07,23;UBERON:0000926,4.96e-07,120;UBERON:0004120,4.96e-07,120;UBERON:0006603,4.96e-07,120 | |||
|phase1_expression=6.08565618998217,1.39590163055744,0.454999239389536,0.60492842261366,0.500895729946347,0,1.40167584357315,481.888243083963,164.863593639602,104.860907792253,60.6111607518288,50.8148652800293,22.7696970808504,22.5544638241013,16.3223783289675,18.2227740650843,75.5526828378398,24.4483178152634,29.8909465260511,29.7072756258621,1.02051948181284,16.0851340945434,8.097193463307,7.67963629408352,11.2410547722913,1.72269589234506,1.29228598847722,0.861884930743556,3.23039813075836,5.29263272495855,5.76499327703792,0,0,0,0,0.332469290716985,1.22501613757421,5.02237956884289,5.4693474116666,1.57057123192139,22.9410280332096,13.6609096991689,5.34061388334269,0,0,0,0,0,0,0,0,0,20.4694779390438,146.523152686292,117.632829699862,2.57259436035947,5.44413535883638,8.25075347643908,0,0,0,0,0,16.1981949110652,22.7439263390404,16.3410426437603,5.69240209984969,3.45796474789399,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,22.2635008399561,0.755715601067855,2.6087803983151,33.5565312022741,0.679971333707751,0,7.14754059192436,0,2.38755514223978,0,0,0,0,0,0,0,0,0,0,9.1347103775248,53.8590797986117,8.90652834388949,0.173485326766136,0,0.230615497256059,0.452167921657868,4.35078216402108,0.502666365318702,1.23597483867187,0.578397427679647,4.42305275974937,0.647067399789637,0.662524555381181,0.484875253135222,16.775258509631,0,0,13.2837668708468,537.011388035535,398.335413379623,322.504236311438,0,0.457500602818626,0,0.173824320192276,0.511430914660661,0,0,0.712875546952214,0.622034853050465,1.51633655060205,1.47309299120532,0,0,0,0,0.748401490664606,0,0.187403449119458,0,0,0.756424320671277,0.175951124163949,0,0.834141747676794,1.0447564995665,1.85203922767149,0,74.4345978552029,109.630208430869,77.5766353349968,0.828503090142008,1.17263029990548,0,0.473489471170421,0.983821158737019,0.308534225774757,0.232533944750408,0.268273401399619,1.28441876603886,0.493679549740441,0,0.162137619091711,0.292399974850665,0.219550115291051,0.402619256281115,0,0.102904612379284,19.1642894130603,4.49565963328025,0,0,0.257734922644187,0.403367049246685,0.889512175379481,1.33157938278791,5.69434873853414,4.28217282282428,10.304743560811,14.1259095149217,12.2827374885046,7.19055526923377,10.1584883441106,12.9441827615339,0.189667900953082,0,0,0,0.193952487167626,0.701358198903186,0.316182685621286,0.442830443938806,0.156998727841375,0,1.1858105083486,0.166845105716094,0.786235980452812,0.224862112384854,0,0.482354319504834,1.52775511068852,2.5892652370573,17.5106044917038,6.58947391651396,1.43768206527355,4.09355042435354,2.18426371180192,2.27320990152401,0.538192240565737,5.30687873499704,2.03228509183265,0,2.28150967018836,0.169745085775188,0,0.167506257441816,0,0.390267295715598,1.41871629695572,1.32878813789265,2.07291199254733,3.27726629431476,2.93564469172023,2.31438493730419,46.7452980211744,15.7732648307426,2.95058563811422,2.75936746304733,0,0.35163505977661,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,2.41298144854057,0,0.488660878060728,7.4236555337641,0,0,0.302323556964751,0.754420319023592,0,0.614870295887855,1.29214146584111,0.363533729477506,0.712994756769443,13.9056173491759,0,0,1.02131881726136,0,0,0,0,0.178368817602071,0,0.304464949114599,9.62154003061212,1.48282449604674,0.441056796109924,1.81374878235628,3.22928853391811,0.422190474497091,0.835606408021955,0.492422699235184,11.0762717919343,0.370850604021019,11.619219894254,0.619160603889667,2.96311243791539,3.76736914009382,6.01454601972511,4.80434163733698,2124.3904180632,1957.500963651,1369.69994037564,6.68269432610579,0.158167996790568,0,0.108005340821801,0.209088296014469,0.436725127492355,2.69728692769641,3.71940550764012,5.23511883968059,17.498021394392,3.72803587852155,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.168956125490778,0.352071715937262,0,0.209718688851422,0,0,6.63623353319174,1.21635129174099,3.49217254360413,5.06691209613401,2.14832034800978,2.18549490259391,3.96644983415897,4.13530676088816,4.84638959751109,4.19137436602499,2.21817607301049,6.04238860586465,3.94468550725351,4.9088298916259,0.453460767230423,0,0,0,3.67060228661162,21.2081197259836,7.14291334642334,4.07299920250225,2.00628841614145,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0,0.183843508450014,0,0,0.64183841918363,1.26348605881899,0.760437899670719,0.188626341386076,0.37456602987953,0.576226371643824,0.516919220600519,0,0.347652977834566,0.192909220463705,0.412085900803307,0.735994600671987,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.376437521661322,0.507687647350059,0.365855945745545,0.789209134313529,0.679020569229309,0,0.237270036248348,0.29551344712669,0.409231043169689,0,0.578719832943424,0,0.467863216890817,1.50409737833809,0.765153328275374,0,0.463735671240843 | |||
|short_description=p1@Rgs1 | |||
}} |
Revision as of 23:02, 4 August 2015
Short description: | p1@Rgs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rgs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:34 |
Association with transcript: | 0bp_to_ENSMUST00000027604, ENSMUST00000167317, ENSMUST00000169042, ENSMUST00000170870, uc007cxk.1_5end |
EntrezGene: | 50778 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.93e-17 | 32 |
hematopoietic oligopotent progenitor cell | 1.93e-17 | 32 |
hematopoietic stem cell | 1.93e-17 | 32 |
hematopoietic multipotent progenitor cell | 1.93e-17 | 32 |
connective tissue cell | 1.18e-14 | 46 |
mesenchymal cell | 1.18e-14 | 46 |
hematopoietic lineage restricted progenitor cell | 2.24e-13 | 25 |
motile cell | 2.05e-11 | 54 |
leukocyte | 4.61e-11 | 17 |
nongranular leukocyte | 4.61e-11 | 17 |
lymphoid lineage restricted progenitor cell | 2.38e-10 | 12 |
T cell | 1.11e-09 | 11 |
pro-T cell | 1.11e-09 | 11 |
common myeloid progenitor | 1.71e-09 | 19 |
lymphocyte | 3.78e-09 | 13 |
common lymphoid progenitor | 3.78e-09 | 13 |
mature alpha-beta T cell | 1.19e-08 | 9 |
alpha-beta T cell | 1.19e-08 | 9 |
immature T cell | 1.19e-08 | 9 |
mature T cell | 1.19e-08 | 9 |
immature alpha-beta T cell | 1.19e-08 | 9 |
CD4-positive, alpha-beta T cell | 8.08e-08 | 8 |
myeloid cell | 3.95e-07 | 16 |