FFCP PHASE1:Mm9::chr6:121081068..121081083,-: Difference between revisions
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{{FFCP|EntrezGene=194401|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-51bp_to_uc009dob.1_5end|description=CAGE_peak_3_at_Mical3_5end|id=chr6:121081068..121081083,-|ontology_enrichment_celltype=CL:0000117!6.22e-15!23;CL:0000337!6.22e-15!23;CL:0000540!7.61e-12!33;CL:0000047!7.61e-12!33;CL:0000031!7.61e-12!33;CL:0000404!7.61e-12!33;CL:0000393!3.03e-08!39;CL:0000211!3.03e-08!39;CL:0002319!3.34e-08!43;CL:0000221!3.35e-08!44;CL:0000133!3.35e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-21,23;CL:0000337,1.02e-21,23;CL:0000540,3.22e-14,33;CL:0000047,3.22e-14,33;CL:0000031,3.22e-14,33;CL:0000404,3.22e-14,33;CL:0000393,5.72e-11,39;CL:0000211,5.72e-11,39;CL:0002319,2.62e-10,43;CL:0000221,6.44e-10,44;CL:0000133,6.44e-10,44;CL:0002609,2.47e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.44e-29!71;UBERON:0003075!1.44e-29!71;UBERON:0007284!1.44e-29!71;UBERON:0001049!4.16e-29!52;UBERON:0005068!4.16e-29!52;UBERON:0006241!4.16e-29!52;UBERON:0007135!4.16e-29!52;UBERON:0001017!1.38e-28!73;UBERON:0005743!1.38e-28!73;UBERON:0000955!2.17e-28!50;UBERON:0006238!2.17e-28!50;UBERON:0002616!1.80e-27!49;UBERON:0000073!4.96e-27!75;UBERON:0001016!4.96e-27!75;UBERON:0000033!5.46e-27!63;UBERON:0004121!6.50e-25!102;UBERON:0000924!6.50e-25!102;UBERON:0006601!6.50e-25!102;UBERON:0003056!1.42e-23!49;UBERON:0003080!4.08e-23!40;UBERON:0002780!2.85e-22!39;UBERON:0001890!2.85e-22!39;UBERON:0006240!2.85e-22!39;UBERON:0002020!9.17e-22!34;UBERON:0002791!9.62e-19!29;UBERON:0003528!9.62e-19!29;UBERON:0001893!9.62e-19!29;UBERON:0007811!3.66e-14!86;UBERON:0000956!1.81e-13!21;UBERON:0001869!1.81e-13!21;UBERON:0000203!1.81e-13!21;UBERON:0000153!1.50e-12!94;UBERON:0002619!6.01e-11!17;UBERON:0002021!3.30e-09!10;UBERON:0000411!3.30e-09!10;UBERON:0001950!3.30e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.86e-40,54;UBERON:0001049,1.14e-37,52;UBERON:0005068,1.14e-37,52;UBERON:0006241,1.14e-37,52;UBERON:0007135,1.14e-37,52;UBERON:0001017,4.57e-34,73;UBERON:0002020,5.54e-34,34;UBERON:0000955,4.06e-33,47;UBERON:0006238,4.06e-33,47;UBERON:0001016,9.81e-33,75;UBERON:0002616,9.83e-32,46;UBERON:0002346,1.03e-30,64;UBERON:0003075,1.03e-30,64;UBERON:0007284,1.03e-30,64;UBERON:0003528,4.76e-29,29;UBERON:0002791,4.76e-29,29;UBERON:0001893,4.76e-29,29;UBERON:0003080,1.25e-27,40;UBERON:0002780,2.38e-26,39;UBERON:0001890,2.38e-26,39;UBERON:0006240,2.38e-26,39;UBERON:0010371,3.71e-25,73;UBERON:0004121,1.33e-23,95;UBERON:0000924,1.33e-23,95;UBERON:0006601,1.33e-23,95;UBERON:0003056,7.31e-22,49;UBERON:0000956,1.87e-20,21;UBERON:0001869,1.87e-20,21;UBERON:0000203,1.87e-20,21;UBERON:0010314,4.50e-17,92;UBERON:0002619,2.35e-16,17;UBERON:0002021,5.29e-14,10;UBERON:0000411,5.29e-14,10;UBERON:0001950,5.29e-14,10;UBERON:0000025,2.43e-11,114;UBERON:0003076,4.77e-10,12;UBERON:0003057,4.77e-10,12;UBERON:0004111,9.26e-10,122;UBERON:0002420,1.38e-09,8;UBERON:0007245,1.38e-09,8;UBERON:0010009,1.38e-09,8;UBERON:0010011,1.38e-09,8;UBERON:0000454,1.38e-09,8;UBERON:0000369,3.80e-07,5;UBERON:0002435,3.80e-07,5;UBERON:0000204,3.80e-07,5;UBERON:0010082,3.80e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,3.43937983461316,7.40587370980846,0.633831403506179,0,0,0,0,0,0,0,2.48855069540346,3.24014251996058,2.3135745748652,1.71390590642282,2.87129103237098,4.04219637409348,2.97120960156533,5.51531271966013,6.60695285996332,2.55374676170375,2.61131106535614,5.27545150920775,4.57438218012048,3.64639359389732,1.67509799400829,1.68828783009504,3.66715794664344,2.35702868378934,2.84743361598206,3.35519002485541,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.230615497256059,0.301445281105245,0.587943535678524,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0,0,3.80615036115011,3.77004072264219,0.255457055208591,0,0,0,7.04016005202667,6.40500843946077,6.15706325353036,8.69121600961382,7.92717917724025,4.36354893575076,5.51620294430376,0.101839363850316,0,0,0,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,0.544291993210623,1.15302348256365,0.655912071918102,0.517406741478031,0,0.189106080167819,0.527853372491847,0,0,0,0.205782136407943,0,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,4.6263788684108,2.6755199218614,0,0,0,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,3.53211297973142,2.10981035865966,0,0,0.315508219416257,0.390438744296638,1.07711698866399,0,0,0,0.404810701674894,0,0.395287777946524,10.2822821254978,1.70328102249922,0,0,2.47455184458803,0,0.242780636154981,0,0,0,0,0.258428293168221,0,1.42598951353889,0,0,1.03135543248187,2.04263763452273,0.18006109403131,0.776152102696527,0.857348140126369,0.532020700926821,1.42695054081656,0.658196082408484,0.913394847343798,0,0,0.220528398054962,0.32977250588296,0,0.180938774784468,0.119372344003136,0,0.291480836629851,1.48340241608408,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.418176592028937,0,0,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,1.64836461840539,0.214368379079066,0,7.34177395402186,6.90487854760765,10.8850147553485,3.78077001156113,6.16574267793578,12.8416962556249,6.75022500231806,9.90706647093285,6.79713613476307,5.69536342927002,0.31136204275253,0.399024873401031,1.87806966329548,0.729320151204882,1.04806581313991,0.919217542250071,0.888986911206461,1.03017528619447,1.60459604795908,0.758091635291392,1.77435509923168,1.50901073108861,1.03005658216871,1.08842759088278,0.976402972245426,0.476293691283074,0.927074607558844,0.578727661391115,2.47251540481984,1.47198920134397,1.71434626192708,0.532427418478012,1.1921809497366,1.45346416632329,1.03520318456864,0.846146078916765,1.28049581010941,1.05227884575137,0.543216455383447,1.12228454331548,0.474540072496697,0.788035859004508,1.22769312950907,0.77468420592983,1.35034627686799,4.49659040288303,1.40358965067245,0,0,0,0.231867835620421|short_description=p3@Mical3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:194401 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-51bp_to_uc009dob.1_5end | |||
|cluster_id=chr6:121081068..121081083,- | |||
|description=CAGE_peak_3_at_Mical3_5end | |||
|id=chr6:121081068..121081083,- | |||
|ontology_enrichment_celltype=CL:0000117!6.22e-15!23;CL:0000337!6.22e-15!23;CL:0000540!7.61e-12!33;CL:0000047!7.61e-12!33;CL:0000031!7.61e-12!33;CL:0000404!7.61e-12!33;CL:0000393!3.03e-08!39;CL:0000211!3.03e-08!39;CL:0002319!3.34e-08!43;CL:0000221!3.35e-08!44;CL:0000133!3.35e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-21,23;CL:0000337,1.02e-21,23;CL:0000540,3.22e-14,33;CL:0000047,3.22e-14,33;CL:0000031,3.22e-14,33;CL:0000404,3.22e-14,33;CL:0000393,5.72e-11,39;CL:0000211,5.72e-11,39;CL:0002319,2.62e-10,43;CL:0000221,6.44e-10,44;CL:0000133,6.44e-10,44;CL:0002609,2.47e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.44e-29!71;UBERON:0003075!1.44e-29!71;UBERON:0007284!1.44e-29!71;UBERON:0001049!4.16e-29!52;UBERON:0005068!4.16e-29!52;UBERON:0006241!4.16e-29!52;UBERON:0007135!4.16e-29!52;UBERON:0001017!1.38e-28!73;UBERON:0005743!1.38e-28!73;UBERON:0000955!2.17e-28!50;UBERON:0006238!2.17e-28!50;UBERON:0002616!1.80e-27!49;UBERON:0000073!4.96e-27!75;UBERON:0001016!4.96e-27!75;UBERON:0000033!5.46e-27!63;UBERON:0004121!6.50e-25!102;UBERON:0000924!6.50e-25!102;UBERON:0006601!6.50e-25!102;UBERON:0003056!1.42e-23!49;UBERON:0003080!4.08e-23!40;UBERON:0002780!2.85e-22!39;UBERON:0001890!2.85e-22!39;UBERON:0006240!2.85e-22!39;UBERON:0002020!9.17e-22!34;UBERON:0002791!9.62e-19!29;UBERON:0003528!9.62e-19!29;UBERON:0001893!9.62e-19!29;UBERON:0007811!3.66e-14!86;UBERON:0000956!1.81e-13!21;UBERON:0001869!1.81e-13!21;UBERON:0000203!1.81e-13!21;UBERON:0000153!1.50e-12!94;UBERON:0002619!6.01e-11!17;UBERON:0002021!3.30e-09!10;UBERON:0000411!3.30e-09!10;UBERON:0001950!3.30e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.86e-40,54;UBERON:0001049,1.14e-37,52;UBERON:0005068,1.14e-37,52;UBERON:0006241,1.14e-37,52;UBERON:0007135,1.14e-37,52;UBERON:0001017,4.57e-34,73;UBERON:0002020,5.54e-34,34;UBERON:0000955,4.06e-33,47;UBERON:0006238,4.06e-33,47;UBERON:0001016,9.81e-33,75;UBERON:0002616,9.83e-32,46;UBERON:0002346,1.03e-30,64;UBERON:0003075,1.03e-30,64;UBERON:0007284,1.03e-30,64;UBERON:0003528,4.76e-29,29;UBERON:0002791,4.76e-29,29;UBERON:0001893,4.76e-29,29;UBERON:0003080,1.25e-27,40;UBERON:0002780,2.38e-26,39;UBERON:0001890,2.38e-26,39;UBERON:0006240,2.38e-26,39;UBERON:0010371,3.71e-25,73;UBERON:0004121,1.33e-23,95;UBERON:0000924,1.33e-23,95;UBERON:0006601,1.33e-23,95;UBERON:0003056,7.31e-22,49;UBERON:0000956,1.87e-20,21;UBERON:0001869,1.87e-20,21;UBERON:0000203,1.87e-20,21;UBERON:0010314,4.50e-17,92;UBERON:0002619,2.35e-16,17;UBERON:0002021,5.29e-14,10;UBERON:0000411,5.29e-14,10;UBERON:0001950,5.29e-14,10;UBERON:0000025,2.43e-11,114;UBERON:0003076,4.77e-10,12;UBERON:0003057,4.77e-10,12;UBERON:0004111,9.26e-10,122;UBERON:0002420,1.38e-09,8;UBERON:0007245,1.38e-09,8;UBERON:0010009,1.38e-09,8;UBERON:0010011,1.38e-09,8;UBERON:0000454,1.38e-09,8;UBERON:0000369,3.80e-07,5;UBERON:0002435,3.80e-07,5;UBERON:0000204,3.80e-07,5;UBERON:0010082,3.80e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,3.43937983461316,7.40587370980846,0.633831403506179,0,0,0,0,0,0,0,2.48855069540346,3.24014251996058,2.3135745748652,1.71390590642282,2.87129103237098,4.04219637409348,2.97120960156533,5.51531271966013,6.60695285996332,2.55374676170375,2.61131106535614,5.27545150920775,4.57438218012048,3.64639359389732,1.67509799400829,1.68828783009504,3.66715794664344,2.35702868378934,2.84743361598206,3.35519002485541,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.230615497256059,0.301445281105245,0.587943535678524,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0,0,3.80615036115011,3.77004072264219,0.255457055208591,0,0,0,7.04016005202667,6.40500843946077,6.15706325353036,8.69121600961382,7.92717917724025,4.36354893575076,5.51620294430376,0.101839363850316,0,0,0,0.390361328888111,0.229902104433473,0.360124259610698,0.60281927134286,0.544291993210623,1.15302348256365,0.655912071918102,0.517406741478031,0,0.189106080167819,0.527853372491847,0,0,0,0.205782136407943,0,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,4.6263788684108,2.6755199218614,0,0,0,0.232236671860439,0,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,3.53211297973142,2.10981035865966,0,0,0.315508219416257,0.390438744296638,1.07711698866399,0,0,0,0.404810701674894,0,0.395287777946524,10.2822821254978,1.70328102249922,0,0,2.47455184458803,0,0.242780636154981,0,0,0,0,0.258428293168221,0,1.42598951353889,0,0,1.03135543248187,2.04263763452273,0.18006109403131,0.776152102696527,0.857348140126369,0.532020700926821,1.42695054081656,0.658196082408484,0.913394847343798,0,0,0.220528398054962,0.32977250588296,0,0.180938774784468,0.119372344003136,0,0.291480836629851,1.48340241608408,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.418176592028937,0,0,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,1.64836461840539,0.214368379079066,0,7.34177395402186,6.90487854760765,10.8850147553485,3.78077001156113,6.16574267793578,12.8416962556249,6.75022500231806,9.90706647093285,6.79713613476307,5.69536342927002,0.31136204275253,0.399024873401031,1.87806966329548,0.729320151204882,1.04806581313991,0.919217542250071,0.888986911206461,1.03017528619447,1.60459604795908,0.758091635291392,1.77435509923168,1.50901073108861,1.03005658216871,1.08842759088278,0.976402972245426,0.476293691283074,0.927074607558844,0.578727661391115,2.47251540481984,1.47198920134397,1.71434626192708,0.532427418478012,1.1921809497366,1.45346416632329,1.03520318456864,0.846146078916765,1.28049581010941,1.05227884575137,0.543216455383447,1.12228454331548,0.474540072496697,0.788035859004508,1.22769312950907,0.77468420592983,1.35034627686799,4.49659040288303,1.40358965067245,0,0,0,0.231867835620421 | |||
|short_description=p3@Mical3 | |||
}} |
Revision as of 01:03, 5 August 2015
Short description: | p3@Mical3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mical3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -51bp_to_uc009dob.1_5end |
EntrezGene: | 194401 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.02e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.02e-21 | 23 |
neuron | 3.22e-14 | 33 |
neuronal stem cell | 3.22e-14 | 33 |
neuroblast | 3.22e-14 | 33 |
electrically signaling cell | 3.22e-14 | 33 |
electrically responsive cell | 5.72e-11 | 39 |
electrically active cell | 5.72e-11 | 39 |
neural cell | 2.62e-10 | 43 |
ectodermal cell | 6.44e-10 | 44 |
neurectodermal cell | 6.44e-10 | 44 |
neuron of cerebral cortex | 2.47e-07 | 6 |