FFCP PHASE1:Mm9::chr1:174271435..174271453,+: Difference between revisions
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{{FFCP|EntrezGene=16513|HGNC=|MCL_coexpression_id=20|UniProt=Q9JM63|association_with_transcript=-64bp_to_ENSMUST00000165893_5end|description=CAGE_peak_4_at_Kcnj10_5end|id=chr1:174271435..174271453,+|ontology_enrichment_celltype=CL:0000221!7.69e-14!44;CL:0000133!7.69e-14!44;CL:0002319!2.97e-13!43;CL:0000055!1.18e-09!50;CL:0000540!2.86e-09!33;CL:0000047!2.86e-09!33;CL:0000031!2.86e-09!33;CL:0000404!2.86e-09!33;CL:0000117!2.21e-07!23;CL:0000337!2.21e-07!23|ontology_enrichment_celltype_v019_2=CL:0000221,6.85e-11,44;CL:0000133,6.85e-11,44;CL:0002453,3.20e-10,8;CL:0002319,4.64e-10,43;CL:0000333,6.40e-10,10;CL:0000095,6.40e-10,10;CL:0000243,6.40e-10,10;CL:0000123,6.40e-10,10;CL:0000125,6.40e-10,10;CL:0000030,6.40e-10,10;CL:0000339,6.40e-10,10;CL:0000128,2.67e-07,6;CL:0000126,2.67e-07,6;CL:0000127,2.67e-07,6;CL:0002610,8.62e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.03e-29!73;UBERON:0005743!8.03e-29!73;UBERON:0000073!1.02e-28!75;UBERON:0001016!1.02e-28!75;UBERON:0004121!2.51e-24!102;UBERON:0000924!2.51e-24!102;UBERON:0006601!2.51e-24!102;UBERON:0001049!1.31e-20!52;UBERON:0005068!1.31e-20!52;UBERON:0006241!1.31e-20!52;UBERON:0007135!1.31e-20!52;UBERON:0000955!5.96e-20!50;UBERON:0006238!5.96e-20!50;UBERON:0002616!4.00e-19!49;UBERON:0000033!4.92e-19!63;UBERON:0002346!2.00e-18!71;UBERON:0003075!2.00e-18!71;UBERON:0007284!2.00e-18!71;UBERON:0002020!4.56e-17!34;UBERON:0002791!5.56e-14!29;UBERON:0003528!5.56e-14!29;UBERON:0001893!5.56e-14!29;UBERON:0003080!2.13e-13!40;UBERON:0003056!7.91e-13!49;UBERON:0002780!1.26e-12!39;UBERON:0001890!1.26e-12!39;UBERON:0006240!1.26e-12!39;UBERON:0000956!5.32e-11!21;UBERON:0001869!5.32e-11!21;UBERON:0000203!5.32e-11!21;UBERON:0007811!1.60e-10!86;UBERON:0002619!2.21e-10!17;UBERON:0000153!1.07e-08!94;UBERON:0003076!2.65e-08!12;UBERON:0003057!2.65e-08!12;UBERON:0002021!4.91e-08!10;UBERON:0000411!4.91e-08!10;UBERON:0001950!4.91e-08!10;UBERON:0002298!9.00e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.58e-34,75;UBERON:0001017,1.04e-33,73;UBERON:0000073,5.51e-32,54;UBERON:0001049,7.16e-29,52;UBERON:0005068,7.16e-29,52;UBERON:0006241,7.16e-29,52;UBERON:0007135,7.16e-29,52;UBERON:0004121,8.00e-29,95;UBERON:0000924,8.00e-29,95;UBERON:0006601,8.00e-29,95;UBERON:0002346,3.13e-26,64;UBERON:0003075,3.13e-26,64;UBERON:0007284,3.13e-26,64;UBERON:0000955,1.82e-24,47;UBERON:0006238,1.82e-24,47;UBERON:0010371,2.90e-23,73;UBERON:0002616,4.77e-23,46;UBERON:0002020,2.41e-22,34;UBERON:0003528,3.25e-18,29;UBERON:0002791,3.25e-18,29;UBERON:0001893,3.25e-18,29;UBERON:0003080,6.45e-17,40;UBERON:0010314,1.96e-16,92;UBERON:0002780,1.33e-15,39;UBERON:0001890,1.33e-15,39;UBERON:0006240,1.33e-15,39;UBERON:0002619,1.43e-15,17;UBERON:0003056,3.78e-15,49;UBERON:0002021,2.52e-14,10;UBERON:0000411,2.52e-14,10;UBERON:0001950,2.52e-14,10;UBERON:0000956,4.88e-14,21;UBERON:0001869,4.88e-14,21;UBERON:0000203,4.88e-14,21;UBERON:0003076,1.60e-13,12;UBERON:0003057,1.60e-13,12;UBERON:0000025,2.21e-08,114;UBERON:0002950,3.07e-08,4;UBERON:0001891,3.07e-08,4;UBERON:0009616,3.07e-08,4;UBERON:0010286,3.07e-08,4;UBERON:0004733,5.03e-08,6;UBERON:0004732,5.03e-08,6;UBERON:0002028,5.03e-08,6;UBERON:0007277,5.03e-08,6;UBERON:0004111,5.72e-08,122;UBERON:0011216,4.36e-07,194;UBERON:0002240,4.94e-07,6;UBERON:0005174,4.94e-07,6;UBERON:0001137,4.94e-07,6;UBERON:0004684,8.62e-07,3;UBERON:0002275,8.62e-07,3|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0.315462165358238,0,0,4.08207792725135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0960879795771,8.78744730937887,10.6936444490856,10.9189408867783,17.2503077237966,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,1.97773272513395,0,9.58720353658895,24.5899715405795,0.518448061542388,0.540023753326763,0,11.1403883917483,8.61387309711293,0.489963196859816,0.479227355091182,0,42.9451935897616,32.3048965355525,26.4203237200739,0.131886287730194,0.182975287204819,0,29.5933978941464,23.0732670112989,23.2253336620751,5.30331453852602,4.41352210477219,0.372798891650601,0,1.20914496170857,0,0,0,0,0,0,0.561777680527007,0,0,0,3.80277233397037,0,0,0,0,0,0,1.37020655662872,0.258937883647172,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,13.1751358655196,14.2423760633149,0,0,0,0,29.3589653233452,13.2675174817402,1.50785222535437,13.9059456153821,15.0872119824895,26.3890816590641,27.0942909323155,0,0.124406970610093,0,1.26265113531884,0,0,0.180062129805349,0,0,0.2562274405697,0.374806898238915,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,11.7762371195911,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,1.1270773567308,0,0.387904974335251,0.631222379012867,2.27651533647326,3.54264355151045,2.82597710114475,1.72756029490521,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,43.6697604766794,56.2616095642575,0,0,0,0,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16513 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JM63 | |||
|association_with_transcript=-64bp_to_ENSMUST00000165893_5end | |||
|cluster_id=chr1:174271435..174271453,+ | |||
|description=CAGE_peak_4_at_Kcnj10_5end | |||
|id=chr1:174271435..174271453,+ | |||
|ontology_enrichment_celltype=CL:0000221!7.69e-14!44;CL:0000133!7.69e-14!44;CL:0002319!2.97e-13!43;CL:0000055!1.18e-09!50;CL:0000540!2.86e-09!33;CL:0000047!2.86e-09!33;CL:0000031!2.86e-09!33;CL:0000404!2.86e-09!33;CL:0000117!2.21e-07!23;CL:0000337!2.21e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.85e-11,44;CL:0000133,6.85e-11,44;CL:0002453,3.20e-10,8;CL:0002319,4.64e-10,43;CL:0000333,6.40e-10,10;CL:0000095,6.40e-10,10;CL:0000243,6.40e-10,10;CL:0000123,6.40e-10,10;CL:0000125,6.40e-10,10;CL:0000030,6.40e-10,10;CL:0000339,6.40e-10,10;CL:0000128,2.67e-07,6;CL:0000126,2.67e-07,6;CL:0000127,2.67e-07,6;CL:0002610,8.62e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.03e-29!73;UBERON:0005743!8.03e-29!73;UBERON:0000073!1.02e-28!75;UBERON:0001016!1.02e-28!75;UBERON:0004121!2.51e-24!102;UBERON:0000924!2.51e-24!102;UBERON:0006601!2.51e-24!102;UBERON:0001049!1.31e-20!52;UBERON:0005068!1.31e-20!52;UBERON:0006241!1.31e-20!52;UBERON:0007135!1.31e-20!52;UBERON:0000955!5.96e-20!50;UBERON:0006238!5.96e-20!50;UBERON:0002616!4.00e-19!49;UBERON:0000033!4.92e-19!63;UBERON:0002346!2.00e-18!71;UBERON:0003075!2.00e-18!71;UBERON:0007284!2.00e-18!71;UBERON:0002020!4.56e-17!34;UBERON:0002791!5.56e-14!29;UBERON:0003528!5.56e-14!29;UBERON:0001893!5.56e-14!29;UBERON:0003080!2.13e-13!40;UBERON:0003056!7.91e-13!49;UBERON:0002780!1.26e-12!39;UBERON:0001890!1.26e-12!39;UBERON:0006240!1.26e-12!39;UBERON:0000956!5.32e-11!21;UBERON:0001869!5.32e-11!21;UBERON:0000203!5.32e-11!21;UBERON:0007811!1.60e-10!86;UBERON:0002619!2.21e-10!17;UBERON:0000153!1.07e-08!94;UBERON:0003076!2.65e-08!12;UBERON:0003057!2.65e-08!12;UBERON:0002021!4.91e-08!10;UBERON:0000411!4.91e-08!10;UBERON:0001950!4.91e-08!10;UBERON:0002298!9.00e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.58e-34,75;UBERON:0001017,1.04e-33,73;UBERON:0000073,5.51e-32,54;UBERON:0001049,7.16e-29,52;UBERON:0005068,7.16e-29,52;UBERON:0006241,7.16e-29,52;UBERON:0007135,7.16e-29,52;UBERON:0004121,8.00e-29,95;UBERON:0000924,8.00e-29,95;UBERON:0006601,8.00e-29,95;UBERON:0002346,3.13e-26,64;UBERON:0003075,3.13e-26,64;UBERON:0007284,3.13e-26,64;UBERON:0000955,1.82e-24,47;UBERON:0006238,1.82e-24,47;UBERON:0010371,2.90e-23,73;UBERON:0002616,4.77e-23,46;UBERON:0002020,2.41e-22,34;UBERON:0003528,3.25e-18,29;UBERON:0002791,3.25e-18,29;UBERON:0001893,3.25e-18,29;UBERON:0003080,6.45e-17,40;UBERON:0010314,1.96e-16,92;UBERON:0002780,1.33e-15,39;UBERON:0001890,1.33e-15,39;UBERON:0006240,1.33e-15,39;UBERON:0002619,1.43e-15,17;UBERON:0003056,3.78e-15,49;UBERON:0002021,2.52e-14,10;UBERON:0000411,2.52e-14,10;UBERON:0001950,2.52e-14,10;UBERON:0000956,4.88e-14,21;UBERON:0001869,4.88e-14,21;UBERON:0000203,4.88e-14,21;UBERON:0003076,1.60e-13,12;UBERON:0003057,1.60e-13,12;UBERON:0000025,2.21e-08,114;UBERON:0002950,3.07e-08,4;UBERON:0001891,3.07e-08,4;UBERON:0009616,3.07e-08,4;UBERON:0010286,3.07e-08,4;UBERON:0004733,5.03e-08,6;UBERON:0004732,5.03e-08,6;UBERON:0002028,5.03e-08,6;UBERON:0007277,5.03e-08,6;UBERON:0004111,5.72e-08,122;UBERON:0011216,4.36e-07,194;UBERON:0002240,4.94e-07,6;UBERON:0005174,4.94e-07,6;UBERON:0001137,4.94e-07,6;UBERON:0004684,8.62e-07,3;UBERON:0002275,8.62e-07,3 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0.315462165358238,0,0,4.08207792725135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0960879795771,8.78744730937887,10.6936444490856,10.9189408867783,17.2503077237966,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,1.97773272513395,0,9.58720353658895,24.5899715405795,0.518448061542388,0.540023753326763,0,11.1403883917483,8.61387309711293,0.489963196859816,0.479227355091182,0,42.9451935897616,32.3048965355525,26.4203237200739,0.131886287730194,0.182975287204819,0,29.5933978941464,23.0732670112989,23.2253336620751,5.30331453852602,4.41352210477219,0.372798891650601,0,1.20914496170857,0,0,0,0,0,0,0.561777680527007,0,0,0,3.80277233397037,0,0,0,0,0,0,1.37020655662872,0.258937883647172,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,13.1751358655196,14.2423760633149,0,0,0,0,29.3589653233452,13.2675174817402,1.50785222535437,13.9059456153821,15.0872119824895,26.3890816590641,27.0942909323155,0,0.124406970610093,0,1.26265113531884,0,0,0.180062129805349,0,0,0.2562274405697,0.374806898238915,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,11.7762371195911,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,1.1270773567308,0,0.387904974335251,0.631222379012867,2.27651533647326,3.54264355151045,2.82597710114475,1.72756029490521,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,43.6697604766794,56.2616095642575,0,0,0,0,1.29254038639679,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,23.4564560987919,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0.241251699712623,0.238744688006273,0,0.291480836629851,50.4356821468586,0.683483523191411,0,0,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,10.1655331671072,7.82552902062201,4.58316410751517,7.38968684077857,10.2762377965596,7.55393897389701,2.70009000092722,5.85417564191487,9.06284817968409,4.14208249401456,0,0,0,0,0,0.183843508450014,0.888986911206461,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.384150914429216,0.287177344778066,0.952587382566147,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.581385666529314,0.188218760830661,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0.464810523557898,0,0.499621155875892,0.467863216890817,0.859484216193193,0.765153328275374,1.10295709559758,0.927471342481686 | |||
|short_description=p4@Kcnj10 | |||
}} |
Revision as of 07:35, 5 August 2015
Short description: | p4@Kcnj10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Kcnj10_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -64bp_to_ENSMUST00000165893_5end |
EntrezGene: | 16513 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.85e-11 | 44 |
neurectodermal cell | 6.85e-11 | 44 |
oligodendrocyte precursor cell | 3.20e-10 | 8 |
neural cell | 4.64e-10 | 43 |
migratory neural crest cell | 6.40e-10 | 10 |
neuron associated cell | 6.40e-10 | 10 |
glial cell (sensu Vertebrata) | 6.40e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 6.40e-10 | 10 |
glial cell | 6.40e-10 | 10 |
glioblast | 6.40e-10 | 10 |
glioblast (sensu Vertebrata) | 6.40e-10 | 10 |
oligodendrocyte | 2.67e-07 | 6 |
macroglial cell | 2.67e-07 | 6 |
astrocyte | 2.67e-07 | 6 |
raphe nuclei neuron | 8.62e-07 | 3 |