FFCP PHASE1:Mm9::chr6:138371615..138371665,-: Difference between revisions
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{{FFCP|EntrezGene=109593|HGNC=|MCL_coexpression_id=958|UniProt=E0CYK7|association_with_transcript=-95bp_to_ENSMUST00000162185_5end|description=CAGE_peak_3_at_Lmo3_5end|id=chr6:138371615..138371665,-|ontology_enrichment_celltype=CL:0000540!8.97e-20!33;CL:0000047!8.97e-20!33;CL:0000031!8.97e-20!33;CL:0000404!8.97e-20!33;CL:0000117!2.34e-18!23;CL:0000337!2.34e-18!23;CL:0000393!8.99e-15!39;CL:0000211!8.99e-15!39;CL:0000221!2.54e-13!44;CL:0000133!2.54e-13!44;CL:0002319!3.56e-13!43;CL:0000055!1.10e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.37e-28,23;CL:0000337,2.37e-28,23;CL:0000540,3.32e-27,33;CL:0000047,3.32e-27,33;CL:0000031,3.32e-27,33;CL:0000404,3.32e-27,33;CL:0000393,8.59e-22,39;CL:0000211,8.59e-22,39;CL:0002319,4.92e-19,43;CL:0000221,2.00e-18,44;CL:0000133,2.00e-18,44;CL:0002609,3.55e-10,6;CL:0002321,7.71e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.69e-32!73;UBERON:0005743!2.69e-32!73;UBERON:0000073!9.11e-31!75;UBERON:0001016!9.11e-31!75;UBERON:0001049!3.74e-26!52;UBERON:0005068!3.74e-26!52;UBERON:0006241!3.74e-26!52;UBERON:0007135!3.74e-26!52;UBERON:0002020!4.58e-25!34;UBERON:0000955!1.89e-24!50;UBERON:0006238!1.89e-24!50;UBERON:0003080!3.33e-24!40;UBERON:0002346!4.07e-24!71;UBERON:0003075!4.07e-24!71;UBERON:0007284!4.07e-24!71;UBERON:0002616!1.39e-23!49;UBERON:0002780!1.83e-23!39;UBERON:0001890!1.83e-23!39;UBERON:0006240!1.83e-23!39;UBERON:0004121!1.92e-23!102;UBERON:0000924!1.92e-23!102;UBERON:0006601!1.92e-23!102;UBERON:0003056!1.05e-22!49;UBERON:0000033!1.75e-22!63;UBERON:0002791!6.04e-21!29;UBERON:0003528!6.04e-21!29;UBERON:0001893!6.04e-21!29;UBERON:0000956!7.39e-15!21;UBERON:0001869!7.39e-15!21;UBERON:0000203!7.39e-15!21;UBERON:0007811!1.38e-12!86;UBERON:0002619!1.04e-11!17;UBERON:0000153!1.53e-10!94;UBERON:0002021!1.62e-09!10;UBERON:0000411!1.62e-09!10;UBERON:0001950!1.62e-09!10;UBERON:0002420!2.93e-07!8;UBERON:0007245!2.93e-07!8;UBERON:0010009!2.93e-07!8;UBERON:0010011!2.93e-07!8;UBERON:0000454!2.93e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.52e-41,73;UBERON:0002020,5.57e-41,34;UBERON:0001016,4.36e-40,75;UBERON:0000073,4.38e-37,54;UBERON:0001049,1.70e-34,52;UBERON:0005068,1.70e-34,52;UBERON:0006241,1.70e-34,52;UBERON:0007135,1.70e-34,52;UBERON:0003528,7.05e-34,29;UBERON:0002791,7.05e-34,29;UBERON:0001893,7.05e-34,29;UBERON:0002346,1.01e-30,64;UBERON:0003075,1.01e-30,64;UBERON:0007284,1.01e-30,64;UBERON:0003080,1.64e-30,40;UBERON:0002780,2.61e-29,39;UBERON:0001890,2.61e-29,39;UBERON:0006240,2.61e-29,39;UBERON:0004121,6.98e-29,95;UBERON:0000924,6.98e-29,95;UBERON:0006601,6.98e-29,95;UBERON:0000955,2.35e-28,47;UBERON:0006238,2.35e-28,47;UBERON:0002616,5.17e-27,46;UBERON:0010371,1.61e-25,73;UBERON:0000956,2.00e-25,21;UBERON:0001869,2.00e-25,21;UBERON:0000203,2.00e-25,21;UBERON:0003056,3.29e-23,49;UBERON:0002619,5.76e-20,17;UBERON:0010314,6.57e-18,92;UBERON:0002021,3.03e-15,10;UBERON:0000411,3.03e-15,10;UBERON:0001950,3.03e-15,10;UBERON:0000025,5.33e-10,114;UBERON:0002420,2.32e-09,8;UBERON:0007245,2.32e-09,8;UBERON:0010009,2.32e-09,8;UBERON:0010011,2.32e-09,8;UBERON:0000454,2.32e-09,8;UBERON:0000369,8.56e-09,5;UBERON:0002435,8.56e-09,5;UBERON:0000204,8.56e-09,5;UBERON:0010082,8.56e-09,5;UBERON:0002240,8.83e-09,6;UBERON:0005174,8.83e-09,6;UBERON:0001137,8.83e-09,6;UBERON:0004111,1.06e-08,122;UBERON:0011216,3.52e-08,194;UBERON:0001948,5.17e-08,5;UBERON:0002315,5.17e-08,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,4.23192783417626,3.1691570175309,0,0,0,0,0,0,0.384218305321555,3.7328260431052,5.94026128659439,3.78584930432488,4.85606673486466,4.41737081903227,11.3916443269907,11.5014565221884,12.8690630125403,3.30347642998166,2.42605942361857,1.68967186581868,5.27545150920775,4.66586982372289,6.77187381723788,2.23346399201105,0.56276261003168,2.90316670775939,5.59794312399969,4.9830088279686,3.54158947068071,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99581278809645,7.77751024791665,14.0732874366408,7.82209440865244,9.71718737855256,2.0778804455956,11.0324058886075,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0,0.374806898238915,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,9.67333763394985,7.10041825417063,0,0,0,0.232236671860439,0.257734922644187,0.403367049246685,1.33426826306922,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.481651769963376,1.17211686592203,0,0,1.26203287766503,1.17131623288992,2.15423397732799,0.238968797952552,0,0,0.809621403349789,2.04579100537918,2.37172666767914,5.78378369559253,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.36175842301515,0.720244376125241,0.258717367565509,0.214337035031592,0.177340233642274,0,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,9.03602948187307,7.36520378411483,4.01026859407578,6.70227411140382,4.11049511862385,9.06472676867641,4.05013500139084,4.05289082901798,7.70342095273148,5.1776031175182,0.31136204275253,1.59609949360412,0.512200817262403,0.486213434136588,0.628839487883947,0.919217542250071,1.33348036680969,0.824140228955577,2.88827288632634,1.01078884705519,1.2673964994512,0.377252682772152,0.749132059759059,0.960377286073039,0.976402972245426,0.476293691283074,0.579421629724277,0.578727661391115,0.824171801606613,0.441596760403192,1.37147700954166,1.24233064311536,0.715308569841963,0.290692833264657,0.376437521661322,0.846146078916765,0.548783918618318,1.8414879800649,1.08643291076689,0.561142271657738,0.237270036248348,1.0835493061312,1.22769312950907,0.929621047115796,0,0.749431733813838,0,0.644613162144895,0,0,0|short_description=p3@Lmo3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:109593 | |||
|HGNC= | |||
|MCL_coexpression_id=958 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E0CYK7 | |||
|association_with_transcript=-95bp_to_ENSMUST00000162185_5end | |||
|cluster_id=chr6:138371615..138371665,- | |||
|description=CAGE_peak_3_at_Lmo3_5end | |||
|id=chr6:138371615..138371665,- | |||
|ontology_enrichment_celltype=CL:0000540!8.97e-20!33;CL:0000047!8.97e-20!33;CL:0000031!8.97e-20!33;CL:0000404!8.97e-20!33;CL:0000117!2.34e-18!23;CL:0000337!2.34e-18!23;CL:0000393!8.99e-15!39;CL:0000211!8.99e-15!39;CL:0000221!2.54e-13!44;CL:0000133!2.54e-13!44;CL:0002319!3.56e-13!43;CL:0000055!1.10e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.37e-28,23;CL:0000337,2.37e-28,23;CL:0000540,3.32e-27,33;CL:0000047,3.32e-27,33;CL:0000031,3.32e-27,33;CL:0000404,3.32e-27,33;CL:0000393,8.59e-22,39;CL:0000211,8.59e-22,39;CL:0002319,4.92e-19,43;CL:0000221,2.00e-18,44;CL:0000133,2.00e-18,44;CL:0002609,3.55e-10,6;CL:0002321,7.71e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.69e-32!73;UBERON:0005743!2.69e-32!73;UBERON:0000073!9.11e-31!75;UBERON:0001016!9.11e-31!75;UBERON:0001049!3.74e-26!52;UBERON:0005068!3.74e-26!52;UBERON:0006241!3.74e-26!52;UBERON:0007135!3.74e-26!52;UBERON:0002020!4.58e-25!34;UBERON:0000955!1.89e-24!50;UBERON:0006238!1.89e-24!50;UBERON:0003080!3.33e-24!40;UBERON:0002346!4.07e-24!71;UBERON:0003075!4.07e-24!71;UBERON:0007284!4.07e-24!71;UBERON:0002616!1.39e-23!49;UBERON:0002780!1.83e-23!39;UBERON:0001890!1.83e-23!39;UBERON:0006240!1.83e-23!39;UBERON:0004121!1.92e-23!102;UBERON:0000924!1.92e-23!102;UBERON:0006601!1.92e-23!102;UBERON:0003056!1.05e-22!49;UBERON:0000033!1.75e-22!63;UBERON:0002791!6.04e-21!29;UBERON:0003528!6.04e-21!29;UBERON:0001893!6.04e-21!29;UBERON:0000956!7.39e-15!21;UBERON:0001869!7.39e-15!21;UBERON:0000203!7.39e-15!21;UBERON:0007811!1.38e-12!86;UBERON:0002619!1.04e-11!17;UBERON:0000153!1.53e-10!94;UBERON:0002021!1.62e-09!10;UBERON:0000411!1.62e-09!10;UBERON:0001950!1.62e-09!10;UBERON:0002420!2.93e-07!8;UBERON:0007245!2.93e-07!8;UBERON:0010009!2.93e-07!8;UBERON:0010011!2.93e-07!8;UBERON:0000454!2.93e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.52e-41,73;UBERON:0002020,5.57e-41,34;UBERON:0001016,4.36e-40,75;UBERON:0000073,4.38e-37,54;UBERON:0001049,1.70e-34,52;UBERON:0005068,1.70e-34,52;UBERON:0006241,1.70e-34,52;UBERON:0007135,1.70e-34,52;UBERON:0003528,7.05e-34,29;UBERON:0002791,7.05e-34,29;UBERON:0001893,7.05e-34,29;UBERON:0002346,1.01e-30,64;UBERON:0003075,1.01e-30,64;UBERON:0007284,1.01e-30,64;UBERON:0003080,1.64e-30,40;UBERON:0002780,2.61e-29,39;UBERON:0001890,2.61e-29,39;UBERON:0006240,2.61e-29,39;UBERON:0004121,6.98e-29,95;UBERON:0000924,6.98e-29,95;UBERON:0006601,6.98e-29,95;UBERON:0000955,2.35e-28,47;UBERON:0006238,2.35e-28,47;UBERON:0002616,5.17e-27,46;UBERON:0010371,1.61e-25,73;UBERON:0000956,2.00e-25,21;UBERON:0001869,2.00e-25,21;UBERON:0000203,2.00e-25,21;UBERON:0003056,3.29e-23,49;UBERON:0002619,5.76e-20,17;UBERON:0010314,6.57e-18,92;UBERON:0002021,3.03e-15,10;UBERON:0000411,3.03e-15,10;UBERON:0001950,3.03e-15,10;UBERON:0000025,5.33e-10,114;UBERON:0002420,2.32e-09,8;UBERON:0007245,2.32e-09,8;UBERON:0010009,2.32e-09,8;UBERON:0010011,2.32e-09,8;UBERON:0000454,2.32e-09,8;UBERON:0000369,8.56e-09,5;UBERON:0002435,8.56e-09,5;UBERON:0000204,8.56e-09,5;UBERON:0010082,8.56e-09,5;UBERON:0002240,8.83e-09,6;UBERON:0005174,8.83e-09,6;UBERON:0001137,8.83e-09,6;UBERON:0004111,1.06e-08,122;UBERON:0011216,3.52e-08,194;UBERON:0001948,5.17e-08,5;UBERON:0002315,5.17e-08,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,4.23192783417626,3.1691570175309,0,0,0,0,0,0,0.384218305321555,3.7328260431052,5.94026128659439,3.78584930432488,4.85606673486466,4.41737081903227,11.3916443269907,11.5014565221884,12.8690630125403,3.30347642998166,2.42605942361857,1.68967186581868,5.27545150920775,4.66586982372289,6.77187381723788,2.23346399201105,0.56276261003168,2.90316670775939,5.59794312399969,4.9830088279686,3.54158947068071,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99581278809645,7.77751024791665,14.0732874366408,7.82209440865244,9.71718737855256,2.0778804455956,11.0324058886075,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0,0.374806898238915,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,9.67333763394985,7.10041825417063,0,0,0,0.232236671860439,0.257734922644187,0.403367049246685,1.33426826306922,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.481651769963376,1.17211686592203,0,0,1.26203287766503,1.17131623288992,2.15423397732799,0.238968797952552,0,0,0.809621403349789,2.04579100537918,2.37172666767914,5.78378369559253,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.36175842301515,0.720244376125241,0.258717367565509,0.214337035031592,0.177340233642274,0,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,9.03602948187307,7.36520378411483,4.01026859407578,6.70227411140382,4.11049511862385,9.06472676867641,4.05013500139084,4.05289082901798,7.70342095273148,5.1776031175182,0.31136204275253,1.59609949360412,0.512200817262403,0.486213434136588,0.628839487883947,0.919217542250071,1.33348036680969,0.824140228955577,2.88827288632634,1.01078884705519,1.2673964994512,0.377252682772152,0.749132059759059,0.960377286073039,0.976402972245426,0.476293691283074,0.579421629724277,0.578727661391115,0.824171801606613,0.441596760403192,1.37147700954166,1.24233064311536,0.715308569841963,0.290692833264657,0.376437521661322,0.846146078916765,0.548783918618318,1.8414879800649,1.08643291076689,0.561142271657738,0.237270036248348,1.0835493061312,1.22769312950907,0.929621047115796,0,0.749431733813838,0,0.644613162144895,0,0,0 | |||
|short_description=p3@Lmo3 | |||
}} |
Revision as of 08:49, 5 August 2015
Short description: | p3@Lmo3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lmo3_5end |
Coexpression cluster: | MCL_coexpression_mm9:958 |
Association with transcript: | -95bp_to_ENSMUST00000162185_5end |
EntrezGene: | 109593 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.37e-28 | 23 |
neuroblast (sensu Vertebrata) | 2.37e-28 | 23 |
neuron | 3.32e-27 | 33 |
neuronal stem cell | 3.32e-27 | 33 |
neuroblast | 3.32e-27 | 33 |
electrically signaling cell | 3.32e-27 | 33 |
electrically responsive cell | 8.59e-22 | 39 |
electrically active cell | 8.59e-22 | 39 |
neural cell | 4.92e-19 | 43 |
ectodermal cell | 2.00e-18 | 44 |
neurectodermal cell | 2.00e-18 | 44 |
neuron of cerebral cortex | 3.55e-10 | 6 |
embryonic cell | 7.71e-09 | 70 |