FFCP PHASE1:Mm9::chr1:37576029..37576044,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:37576029..37576044,-|id=chr1:37576029..37576044,-|ontology_enrichment_celltype=CL:0000239!1.63e-13!6;CL:0000677!1.63e-13!6;CL:0000212!1.63e-13!6;CL:0000584!1.63e-13!6;CL:0002563!1.50e-11!9;CL:0002251!1.50e-11!9;CL:0000075!1.85e-11!7;CL:0000473!2.13e-07!3;CL:0000627!2.13e-07!3;CL:0000682!2.13e-07!3;CL:0000066!4.24e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,5.77e-23,6;CL:0000677,5.77e-23,6;CL:0000584,5.77e-23,6;CL:0000075,1.27e-19,7;CL:0002563,3.69e-15,9;CL:0002251,3.69e-15,9;CL:0000682,5.12e-12,3;CL:0000066,3.40e-11,25;CL:0002076,6.83e-09,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.74e-24!43;UBERON:0000344!3.48e-23!15;UBERON:0001242!2.11e-19!13;UBERON:0000060!2.11e-19!13;UBERON:0001262!2.11e-19!13;UBERON:0004786!2.11e-19!13;UBERON:0005409!3.14e-19!59;UBERON:0004923!2.87e-13!24;UBERON:0003350!1.50e-11!9;UBERON:0004808!1.50e-11!9;UBERON:0001277!1.50e-11!9;UBERON:0000485!3.12e-09!11;UBERON:0001007!1.36e-07!128;UBERON:0001555!1.36e-07!128;UBERON:0007026!1.36e-07!128;UBERON:0000331!1.58e-07!3;UBERON:0002116!1.58e-07!3;UBERON:0001204!1.58e-07!3;UBERON:0001168!1.58e-07!3;UBERON:0004119!2.26e-07!130;UBERON:0000925!2.26e-07!130;UBERON:0006595!2.26e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.74e-35,15;UBERON:0000160,3.55e-34,31;UBERON:0001242,1.20e-28,13;UBERON:0001262,1.20e-28,13;UBERON:0004786,1.20e-28,13;UBERON:0005409,1.56e-21,47;UBERON:0004923,2.70e-21,24;UBERON:0002108,6.86e-16,4;UBERON:0003350,3.69e-15,9;UBERON:0004808,3.69e-15,9;UBERON:0001277,3.69e-15,9;UBERON:0000485,2.58e-12,11;UBERON:0000331,3.02e-12,3;UBERON:0002116,3.02e-12,3;UBERON:0001204,3.02e-12,3;UBERON:0001168,3.02e-12,3;UBERON:0001007,4.83e-09,116;UBERON:0001555,4.83e-09,116;UBERON:0007026,4.83e-09,116;UBERON:0004119,7.86e-09,118;UBERON:0000925,7.86e-09,118;UBERON:0006595,7.86e-09,118;UBERON:0001962,2.28e-08,2;UBERON:0001961,2.28e-08,2;UBERON:0001744,2.28e-08,2;UBERON:0004921,4.66e-07,114|phase1_expression=0,4.88565570695105,4.09499315450582,16.030603199262,19.0340377379612,2.01455126294268,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,3.44113921600755,4.59385571292016,6.03066794622705,3.01659725760245,10.2612646506442,8.82105454159758,1.55211357458713,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7946809812639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,3.96675849995316,0,0,0.128867461322093,0,0,0.190225626112559,7.59246498471219,0.329397909448022,0.754005626400808,0,0.58489226135736,12.5834717211591,12.9682829924817,11.7493351220077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.45294426226567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr1:37576029..37576044,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:37576029..37576044,- | |||
|description=CAGE_peak_at_chr1:37576029..37576044,- | |||
|id=chr1:37576029..37576044,- | |||
|ontology_enrichment_celltype=CL:0000239!1.63e-13!6;CL:0000677!1.63e-13!6;CL:0000212!1.63e-13!6;CL:0000584!1.63e-13!6;CL:0002563!1.50e-11!9;CL:0002251!1.50e-11!9;CL:0000075!1.85e-11!7;CL:0000473!2.13e-07!3;CL:0000627!2.13e-07!3;CL:0000682!2.13e-07!3;CL:0000066!4.24e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.77e-23,6;CL:0000677,5.77e-23,6;CL:0000584,5.77e-23,6;CL:0000075,1.27e-19,7;CL:0002563,3.69e-15,9;CL:0002251,3.69e-15,9;CL:0000682,5.12e-12,3;CL:0000066,3.40e-11,25;CL:0002076,6.83e-09,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.74e-24!43;UBERON:0000344!3.48e-23!15;UBERON:0001242!2.11e-19!13;UBERON:0000060!2.11e-19!13;UBERON:0001262!2.11e-19!13;UBERON:0004786!2.11e-19!13;UBERON:0005409!3.14e-19!59;UBERON:0004923!2.87e-13!24;UBERON:0003350!1.50e-11!9;UBERON:0004808!1.50e-11!9;UBERON:0001277!1.50e-11!9;UBERON:0000485!3.12e-09!11;UBERON:0001007!1.36e-07!128;UBERON:0001555!1.36e-07!128;UBERON:0007026!1.36e-07!128;UBERON:0000331!1.58e-07!3;UBERON:0002116!1.58e-07!3;UBERON:0001204!1.58e-07!3;UBERON:0001168!1.58e-07!3;UBERON:0004119!2.26e-07!130;UBERON:0000925!2.26e-07!130;UBERON:0006595!2.26e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.74e-35,15;UBERON:0000160,3.55e-34,31;UBERON:0001242,1.20e-28,13;UBERON:0001262,1.20e-28,13;UBERON:0004786,1.20e-28,13;UBERON:0005409,1.56e-21,47;UBERON:0004923,2.70e-21,24;UBERON:0002108,6.86e-16,4;UBERON:0003350,3.69e-15,9;UBERON:0004808,3.69e-15,9;UBERON:0001277,3.69e-15,9;UBERON:0000485,2.58e-12,11;UBERON:0000331,3.02e-12,3;UBERON:0002116,3.02e-12,3;UBERON:0001204,3.02e-12,3;UBERON:0001168,3.02e-12,3;UBERON:0001007,4.83e-09,116;UBERON:0001555,4.83e-09,116;UBERON:0007026,4.83e-09,116;UBERON:0004119,7.86e-09,118;UBERON:0000925,7.86e-09,118;UBERON:0006595,7.86e-09,118;UBERON:0001962,2.28e-08,2;UBERON:0001961,2.28e-08,2;UBERON:0001744,2.28e-08,2;UBERON:0004921,4.66e-07,114 | |||
|phase1_expression=0,4.88565570695105,4.09499315450582,16.030603199262,19.0340377379612,2.01455126294268,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,3.44113921600755,4.59385571292016,6.03066794622705,3.01659725760245,10.2612646506442,8.82105454159758,1.55211357458713,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7946809812639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,3.96675849995316,0,0,0.128867461322093,0,0,0.190225626112559,7.59246498471219,0.329397909448022,0.754005626400808,0,0.58489226135736,12.5834717211591,12.9682829924817,11.7493351220077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.45294426226567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr1:37576029..37576044,- | |||
}} |
Latest revision as of 15:06, 5 August 2015
Short description: | p@chr1:37576029..37576044, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:37576029..37576044, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.77e-23 | 6 |
gut absorptive cell | 5.77e-23 | 6 |
enterocyte | 5.77e-23 | 6 |
columnar/cuboidal epithelial cell | 1.27e-19 | 7 |
intestinal epithelial cell | 3.69e-15 | 9 |
epithelial cell of alimentary canal | 3.69e-15 | 9 |
M cell of gut | 5.12e-12 | 3 |
epithelial cell | 3.40e-11 | 25 |
endo-epithelial cell | 6.83e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.74e-35 | 15 |
intestine | 3.55e-34 | 31 |
intestinal mucosa | 1.20e-28 | 13 |
wall of intestine | 1.20e-28 | 13 |
gastrointestinal system mucosa | 1.20e-28 | 13 |
gastrointestinal system | 1.56e-21 | 47 |
organ component layer | 2.70e-21 | 24 |
small intestine | 6.86e-16 | 4 |
epithelium of mucosa | 3.69e-15 | 9 |
gastrointestinal system epithelium | 3.69e-15 | 9 |
intestinal epithelium | 3.69e-15 | 9 |
simple columnar epithelium | 2.58e-12 | 11 |
ileal mucosa | 3.02e-12 | 3 |
ileum | 3.02e-12 | 3 |
mucosa of small intestine | 3.02e-12 | 3 |
wall of small intestine | 3.02e-12 | 3 |
digestive system | 4.83e-09 | 116 |
digestive tract | 4.83e-09 | 116 |
primitive gut | 4.83e-09 | 116 |
endoderm-derived structure | 7.86e-09 | 118 |
endoderm | 7.86e-09 | 118 |
presumptive endoderm | 7.86e-09 | 118 |
gut-associated lymphoid tissue | 2.28e-08 | 2 |
mucosa-associated lymphoid tissue | 2.28e-08 | 2 |
lymphoid tissue | 2.28e-08 | 2 |
subdivision of digestive tract | 4.66e-07 | 114 |