FFCP PHASE1:Mm9::chr11:16642247..16642283,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=162|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:16642247..16642283,-|id=chr11:16642247..16642283,-|ontology_enrichment_celltype=CL:0000181!4.37e-18!5;CL:0000417!4.37e-18!5;CL:0000668!4.37e-18!5;CL:0000412!4.37e-18!5;CL:0000182!4.37e-18!5;CL:0000414!2.59e-08!11;CL:0000057!8.36e-07!1;CL:0000632!8.36e-07!1|ontology_enrichment_celltype_v019_2=CL:0000182,4.85e-47,5;CL:0000057,9.51e-16,1;CL:0000632,9.51e-16,1;CL:0000223,2.75e-12,20;CL:0000066,6.10e-10,25;CL:0002320,2.22e-08,46;CL:0000134,2.22e-08,46;CL:0000219,3.45e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.64e-33!22;UBERON:0007499!3.64e-33!22;UBERON:0006925!3.64e-33!22;UBERON:0009497!3.64e-33!22;UBERON:0000015!3.64e-33!22;UBERON:0002423!3.64e-33!22;UBERON:0006235!3.64e-33!22;UBERON:0008835!3.64e-33!22;UBERON:0003894!3.64e-33!22;UBERON:0004161!3.64e-33!22;UBERON:0008836!3.64e-33!22;UBERON:0009854!1.17e-31!23;UBERON:0009856!1.17e-31!23;UBERON:0002365!5.31e-29!25;UBERON:0002330!5.31e-29!25;UBERON:0005256!2.81e-17!47;UBERON:0005172!1.80e-16!49;UBERON:0005173!1.80e-16!49;UBERON:0002417!1.80e-16!49;UBERON:0000916!1.80e-16!49;UBERON:0003914!1.15e-14!47;UBERON:0005057!2.21e-13!51;UBERON:0003929!2.77e-12!55;UBERON:0009569!9.35e-12!66;UBERON:0002368!4.07e-11!60;UBERON:0005177!3.08e-10!85;UBERON:0002530!3.97e-10!65;UBERON:0000490!6.02e-10!66;UBERON:0000466!1.59e-09!79;UBERON:0005911!1.94e-09!69;UBERON:0002405!2.81e-09!70;UBERON:0000949!5.69e-09!72;UBERON:0000077!1.04e-08!97;UBERON:0002100!1.31e-08!98;UBERON:0001041!6.94e-08!92;UBERON:0003104!5.92e-07!131;UBERON:0009142!5.92e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.96e-24,22;UBERON:0007499,3.96e-24,22;UBERON:0006925,3.96e-24,22;UBERON:0009497,3.96e-24,22;UBERON:0000015,3.96e-24,22;UBERON:0002423,3.96e-24,22;UBERON:0006235,3.96e-24,22;UBERON:0008835,3.96e-24,22;UBERON:0003894,3.96e-24,22;UBERON:0004161,3.96e-24,22;UBERON:0008836,3.96e-24,22;UBERON:0009854,4.18e-23,23;UBERON:0009856,4.18e-23,23;UBERON:0002365,2.66e-21,25;UBERON:0002330,2.66e-21,25;UBERON:0005256,4.78e-12,45;UBERON:0003914,1.50e-11,47;UBERON:0005172,4.27e-11,49;UBERON:0005173,4.27e-11,49;UBERON:0002417,4.27e-11,49;UBERON:0000916,4.27e-11,49;UBERON:0003929,6.31e-10,55;UBERON:0002368,3.96e-09,60;UBERON:0003104,5.52e-09,61;UBERON:0009142,5.52e-09,61;UBERON:0002530,1.88e-08,65;UBERON:0002384,2.22e-08,46;UBERON:0000490,2.50e-08,66;UBERON:0009569,2.50e-08,66;UBERON:0005911,5.59e-08,69;UBERON:0000949,1.17e-07,72;UBERON:0005177,5.28e-07,79;UBERON:0001041,6.41e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,1.3599426674155,4.85732872474035,8.4470934268197,14.7848872742121,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,1.07638448113147,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:16642247..16642283,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=162 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:16642247..16642283,- | |||
|description=CAGE_peak_at_chr11:16642247..16642283,- | |||
|id=chr11:16642247..16642283,- | |||
|ontology_enrichment_celltype=CL:0000181!4.37e-18!5;CL:0000417!4.37e-18!5;CL:0000668!4.37e-18!5;CL:0000412!4.37e-18!5;CL:0000182!4.37e-18!5;CL:0000414!2.59e-08!11;CL:0000057!8.36e-07!1;CL:0000632!8.36e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.85e-47,5;CL:0000057,9.51e-16,1;CL:0000632,9.51e-16,1;CL:0000223,2.75e-12,20;CL:0000066,6.10e-10,25;CL:0002320,2.22e-08,46;CL:0000134,2.22e-08,46;CL:0000219,3.45e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.64e-33!22;UBERON:0007499!3.64e-33!22;UBERON:0006925!3.64e-33!22;UBERON:0009497!3.64e-33!22;UBERON:0000015!3.64e-33!22;UBERON:0002423!3.64e-33!22;UBERON:0006235!3.64e-33!22;UBERON:0008835!3.64e-33!22;UBERON:0003894!3.64e-33!22;UBERON:0004161!3.64e-33!22;UBERON:0008836!3.64e-33!22;UBERON:0009854!1.17e-31!23;UBERON:0009856!1.17e-31!23;UBERON:0002365!5.31e-29!25;UBERON:0002330!5.31e-29!25;UBERON:0005256!2.81e-17!47;UBERON:0005172!1.80e-16!49;UBERON:0005173!1.80e-16!49;UBERON:0002417!1.80e-16!49;UBERON:0000916!1.80e-16!49;UBERON:0003914!1.15e-14!47;UBERON:0005057!2.21e-13!51;UBERON:0003929!2.77e-12!55;UBERON:0009569!9.35e-12!66;UBERON:0002368!4.07e-11!60;UBERON:0005177!3.08e-10!85;UBERON:0002530!3.97e-10!65;UBERON:0000490!6.02e-10!66;UBERON:0000466!1.59e-09!79;UBERON:0005911!1.94e-09!69;UBERON:0002405!2.81e-09!70;UBERON:0000949!5.69e-09!72;UBERON:0000077!1.04e-08!97;UBERON:0002100!1.31e-08!98;UBERON:0001041!6.94e-08!92;UBERON:0003104!5.92e-07!131;UBERON:0009142!5.92e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.96e-24,22;UBERON:0007499,3.96e-24,22;UBERON:0006925,3.96e-24,22;UBERON:0009497,3.96e-24,22;UBERON:0000015,3.96e-24,22;UBERON:0002423,3.96e-24,22;UBERON:0006235,3.96e-24,22;UBERON:0008835,3.96e-24,22;UBERON:0003894,3.96e-24,22;UBERON:0004161,3.96e-24,22;UBERON:0008836,3.96e-24,22;UBERON:0009854,4.18e-23,23;UBERON:0009856,4.18e-23,23;UBERON:0002365,2.66e-21,25;UBERON:0002330,2.66e-21,25;UBERON:0005256,4.78e-12,45;UBERON:0003914,1.50e-11,47;UBERON:0005172,4.27e-11,49;UBERON:0005173,4.27e-11,49;UBERON:0002417,4.27e-11,49;UBERON:0000916,4.27e-11,49;UBERON:0003929,6.31e-10,55;UBERON:0002368,3.96e-09,60;UBERON:0003104,5.52e-09,61;UBERON:0009142,5.52e-09,61;UBERON:0002530,1.88e-08,65;UBERON:0002384,2.22e-08,46;UBERON:0000490,2.50e-08,66;UBERON:0009569,2.50e-08,66;UBERON:0005911,5.59e-08,69;UBERON:0000949,1.17e-07,72;UBERON:0005177,5.28e-07,79;UBERON:0001041,6.41e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,1.3599426674155,4.85732872474035,8.4470934268197,14.7848872742121,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,1.07638448113147,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:16642247..16642283,- | |||
}} |
Latest revision as of 16:21, 5 August 2015
Short description: | p@chr11:16642247..16642283, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:16642247..16642283, - |
Coexpression cluster: | MCL_coexpression_mm9:162 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.85e-47 | 5 |
fibroblast | 9.51e-16 | 1 |
hepatic stellate cell | 9.51e-16 | 1 |
endodermal cell | 2.75e-12 | 20 |
epithelial cell | 6.10e-10 | 25 |
connective tissue cell | 2.22e-08 | 46 |
mesenchymal cell | 2.22e-08 | 46 |
motile cell | 3.45e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
liver | 3.96e-24 | 22 |
epithelial sac | 3.96e-24 | 22 |
digestive gland | 3.96e-24 | 22 |
epithelium of foregut-midgut junction | 3.96e-24 | 22 |
anatomical boundary | 3.96e-24 | 22 |
hepatobiliary system | 3.96e-24 | 22 |
foregut-midgut junction | 3.96e-24 | 22 |
hepatic diverticulum | 3.96e-24 | 22 |
liver primordium | 3.96e-24 | 22 |
septum transversum | 3.96e-24 | 22 |
liver bud | 3.96e-24 | 22 |
digestive tract diverticulum | 4.18e-23 | 23 |
sac | 4.18e-23 | 23 |
exocrine gland | 2.66e-21 | 25 |
exocrine system | 2.66e-21 | 25 |
trunk mesenchyme | 4.78e-12 | 45 |
epithelial tube | 1.50e-11 | 47 |
abdomen element | 4.27e-11 | 49 |
abdominal segment element | 4.27e-11 | 49 |
abdominal segment of trunk | 4.27e-11 | 49 |
abdomen | 4.27e-11 | 49 |
gut epithelium | 6.31e-10 | 55 |
endocrine gland | 3.96e-09 | 60 |
mesenchyme | 5.52e-09 | 61 |
entire embryonic mesenchyme | 5.52e-09 | 61 |
gland | 1.88e-08 | 65 |
connective tissue | 2.22e-08 | 46 |
unilaminar epithelium | 2.50e-08 | 66 |
subdivision of trunk | 2.50e-08 | 66 |
endo-epithelium | 5.59e-08 | 69 |
endocrine system | 1.17e-07 | 72 |
trunk region element | 5.28e-07 | 79 |
foregut | 6.41e-07 | 80 |